Miyakogusa Predicted Gene

Lj1g3v3580320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3580320.1 Non Chatacterized Hit- tr|I3T4U0|I3T4U0_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,60,4e-19,seg,NULL,NODE_59626_length_490_cov_22.089796.path1.1
         (89 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g16420.1                                                        98   2e-21
Glyma03g11680.1                                                        89   8e-19
Glyma01g24880.1                                                        89   1e-18
Glyma18g40650.1                                                        65   1e-11

>Glyma07g16420.1 
          Length = 88

 Score = 98.2 bits (243), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/90 (57%), Positives = 58/90 (64%), Gaps = 3/90 (3%)

Query: 1  MEGLFPFVYKVIMKYKNDKEG-PLGSWICEAPPYTYMTLPSDSDRFQXXXXXXXXXXXXX 59
          MEGL PFVYK IM+ K DKEG P+GSW+CE+P Y+YM LP DS RFQ             
Sbjct: 1  MEGLIPFVYKAIMQSKGDKEGHPIGSWLCESP-YSYMRLPGDSGRFQIQAPAAASPSSTN 59

Query: 60 XXXXXXXTHVIVSPGVQSPHQNLTHRRIAA 89
                 T +IVS GVQSPHQ LTHRRIAA
Sbjct: 60 PNSSSA-TQIIVSSGVQSPHQCLTHRRIAA 88


>Glyma03g11680.1 
          Length = 96

 Score = 89.4 bits (220), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 53/94 (56%), Gaps = 7/94 (7%)

Query: 1  MEGLFPFVYKVIMKYKNDKEGPLGSWICEAPPYTYMTLPSDSDRFQXXXXX-------XX 53
          MEGL PFVYK +M+YKN+K+GP+GSW+CE+P Y+YM LP DS RFQ              
Sbjct: 1  MEGLIPFVYKAVMQYKNEKQGPIGSWLCESPSYSYMKLPGDSGRFQTSASSPFGSDYGFS 60

Query: 54 XXXXXXXXXXXXXTHVIVSPGVQSPHQNLTHRRI 87
                       T +IVS  VQ PH+ +   R+
Sbjct: 61 ASSPSSKLCTSSSTQIIVSSSVQPPHRGMNSPRV 94


>Glyma01g24880.1 
          Length = 95

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 6/93 (6%)

Query: 1  MEGLFPFVYKVIMKYKNDKEGPLGSWICEAPPYTYMTLPSDSDRFQXXXXXXX------X 54
          MEGL PFVYK IM+YKN K+GP+GSW+CE+P Y+YM LP DS RF               
Sbjct: 1  MEGLIPFVYKAIMQYKNGKQGPIGSWLCESPSYSYMKLPGDSGRFHTSASSLIGSDYGFS 60

Query: 55 XXXXXXXXXXXXTHVIVSPGVQSPHQNLTHRRI 87
                      T +IVS  VQSPH+ +   R+
Sbjct: 61 ASSPSSMLATSSTQIIVSSSVQSPHRCVNSPRV 93


>Glyma18g40650.1 
          Length = 45

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 35/41 (85%), Gaps = 1/41 (2%)

Query: 1  MEGLFPFVYKVIMKYKNDKEG-PLGSWICEAPPYTYMTLPS 40
          MEGL PFVYK IM+YK DK+G P+GSW+CE+P Y+YM LP+
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPA 41