Miyakogusa Predicted Gene

Lj1g3v3560250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3560250.1 Non Chatacterized Hit- tr|B9TDS4|B9TDS4_RICCO
Putative uncharacterized protein (Fragment)
OS=Ricinus,65.82,4e-18,DNA-binding domain,DNA-binding, integrase-type;
DNA-binding domain in plant proteins such as,AP2/ERF,CUFF.30874.1
         (233 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g46250.2                                                       313   1e-85
Glyma08g46250.1                                                       313   1e-85
Glyma18g33460.1                                                       311   3e-85

>Glyma08g46250.2 
          Length = 228

 Score =  313 bits (801), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 155/212 (73%), Positives = 170/212 (80%), Gaps = 2/212 (0%)

Query: 19  FVTPLPLYCENLTGSENSNWHAKPKSEQPVLSDDASILDSNTIVQEEPXXXXXXXXXXXK 78
           FVTPLPLYCENL+G ENSN  AKPKSEQP LSDDA+  DSN +VQEEP           K
Sbjct: 19  FVTPLPLYCENLSGFENSNQQAKPKSEQPALSDDATNPDSNNVVQEEPGSSNASGSSSSK 78

Query: 79  EQLMQQTPAGPPVXXXXXXXXXNLHNQETCLMRGVYFKNMKWQAAIKVDKKQIHLGTVGS 138
           EQL+QQ   GPP+         NLHNQE C+MRGVYFKNMKWQAAIKVDKKQIHLGT+GS
Sbjct: 79  EQLIQQI-TGPPIKRRKRHRRKNLHNQEQCIMRGVYFKNMKWQAAIKVDKKQIHLGTLGS 137

Query: 139 QEEAAHLYDRAAFMCGREPNFELPEEEKRELHKFKWDEFLAVTRQAITRKKHKRRLSPGP 198
           QEEAAHLYDRAAFMCGREPNFELPEEEKR+L KFKWDEFLA+TRQAITRKKHKRRLSPGP
Sbjct: 138 QEEAAHLYDRAAFMCGREPNFELPEEEKRDLSKFKWDEFLAMTRQAITRKKHKRRLSPGP 197

Query: 199 LDNGLELLPLQKDDWESKQGVSGFSACETSIS 230
             N  ++LPL KDDW++KQGV   +  ETS+S
Sbjct: 198 -GNSHDMLPLSKDDWDTKQGVIEDAEQETSVS 228


>Glyma08g46250.1 
          Length = 228

 Score =  313 bits (801), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 155/212 (73%), Positives = 170/212 (80%), Gaps = 2/212 (0%)

Query: 19  FVTPLPLYCENLTGSENSNWHAKPKSEQPVLSDDASILDSNTIVQEEPXXXXXXXXXXXK 78
           FVTPLPLYCENL+G ENSN  AKPKSEQP LSDDA+  DSN +VQEEP           K
Sbjct: 19  FVTPLPLYCENLSGFENSNQQAKPKSEQPALSDDATNPDSNNVVQEEPGSSNASGSSSSK 78

Query: 79  EQLMQQTPAGPPVXXXXXXXXXNLHNQETCLMRGVYFKNMKWQAAIKVDKKQIHLGTVGS 138
           EQL+QQ   GPP+         NLHNQE C+MRGVYFKNMKWQAAIKVDKKQIHLGT+GS
Sbjct: 79  EQLIQQI-TGPPIKRRKRHRRKNLHNQEQCIMRGVYFKNMKWQAAIKVDKKQIHLGTLGS 137

Query: 139 QEEAAHLYDRAAFMCGREPNFELPEEEKRELHKFKWDEFLAVTRQAITRKKHKRRLSPGP 198
           QEEAAHLYDRAAFMCGREPNFELPEEEKR+L KFKWDEFLA+TRQAITRKKHKRRLSPGP
Sbjct: 138 QEEAAHLYDRAAFMCGREPNFELPEEEKRDLSKFKWDEFLAMTRQAITRKKHKRRLSPGP 197

Query: 199 LDNGLELLPLQKDDWESKQGVSGFSACETSIS 230
             N  ++LPL KDDW++KQGV   +  ETS+S
Sbjct: 198 -GNSHDMLPLSKDDWDTKQGVIEDAEQETSVS 228


>Glyma18g33460.1 
          Length = 228

 Score =  311 bits (798), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 158/212 (74%), Positives = 169/212 (79%), Gaps = 2/212 (0%)

Query: 19  FVTPLPLYCENLTGSENSNWHAKPKSEQPVLSDDASILDSNTIVQEEPXXXXXXXXXXXK 78
           FVTPLPLYCENL+G ENSN  AK KSEQP LSDDAS  DSN  VQEEP           K
Sbjct: 19  FVTPLPLYCENLSGFENSNQQAKTKSEQPGLSDDASNPDSNNAVQEEPGSSNASGSSSSK 78

Query: 79  EQLMQQTPAGPPVXXXXXXXXXNLHNQETCLMRGVYFKNMKWQAAIKVDKKQIHLGTVGS 138
           EQL+QQ   GPP+         NLHNQE C+MRGVYFKNMKWQAAIKVDKKQIHLGTVGS
Sbjct: 79  EQLIQQI-TGPPIKRRKRHRRKNLHNQEQCVMRGVYFKNMKWQAAIKVDKKQIHLGTVGS 137

Query: 139 QEEAAHLYDRAAFMCGREPNFELPEEEKRELHKFKWDEFLAVTRQAITRKKHKRRLSPGP 198
           QEEAAHLYDRAAFMCGREPNFELPE+EKREL KFKWDEFLA+TRQAITRKKHKRRLSPGP
Sbjct: 138 QEEAAHLYDRAAFMCGREPNFELPEDEKRELSKFKWDEFLAMTRQAITRKKHKRRLSPGP 197

Query: 199 LDNGLELLPLQKDDWESKQGVSGFSACETSIS 230
            DNG ++LPL KDDW+SKQGV   +  ET +S
Sbjct: 198 -DNGHDILPLPKDDWDSKQGVIEDAEQETPVS 228