Miyakogusa Predicted Gene

Lj1g3v3556890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3556890.1 Non Chatacterized Hit- tr|I1LWI6|I1LWI6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,69.41,0.0000000000005,PH domain-like,NULL; HMG-box,High mobility
group, superfamily; high mobility group,High mobility gro,CUFF.30926.1
         (494 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g33240.1                                                       541   e-154
Glyma03g03780.1                                                       541   e-154
Glyma13g05140.1                                                       388   e-108
Glyma01g08120.1                                                       163   4e-40
Glyma11g21340.1                                                       146   4e-35
Glyma12g12980.1                                                       128   2e-29
Glyma01g06920.1                                                        62   2e-09

>Glyma01g33240.1 
          Length = 640

 Score =  541 bits (1393), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 298/480 (62%), Positives = 334/480 (69%), Gaps = 27/480 (5%)

Query: 19  KDSFREKSFHMPNSNTQYVSDEIMPMADVGDEIMPMADVGDVIMPMADVGDEIMPMADVD 78
           KDS  E SFH+PNSNTQ+V DE  P A V                     D+IM MADV 
Sbjct: 162 KDSLMEISFHIPNSNTQFVGDENRPPAQV-------------------FRDKIMSMADVG 202

Query: 79  AGGEDAVVTFEGIGIFTPRGRYSVELHLSFFRLRGPANDFKIQYSSIVRLYLLPKLNQPR 138
           AGGEDA+VTFEGI I TPRGRYSVELH+SF RL+G ANDFKIQYSS+VRL+LLPK NQP 
Sbjct: 203 AGGEDAIVTFEGIAILTPRGRYSVELHMSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 262

Query: 139 TFVVISLDPPIREGQTLYPHIVMQFESDFVVQCELAINEDLYNTKYNDKLELSYKGLIHG 198
           TFV+ISLDPPIR+GQTLYPHIVMQFE+D+VV+ ELAINEDLYNTKY DKL+LSYKGLIH 
Sbjct: 263 TFVIISLDPPIRKGQTLYPHIVMQFETDYVVESELAINEDLYNTKYKDKLDLSYKGLIHE 322

Query: 199 VFTTILCGLSGSKVTKPGTFRSFVHGYAVKSSLKAEEGYLYPLEKSFFFLPKPPTLILHE 258
           VFTTIL GLSG+KVTKPG FRS   GYAVKSSLKAE+G LYPLEKSFFFLPKPPTLILHE
Sbjct: 323 VFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHE 382

Query: 259 EIDYLGFEQHIARGSKICYFHLLIRLKSEQEHLFCNIQRNEFNKLTAFIISKGLKLMDLR 318
           EIDY+ FE+H A GS + YF LLIRLKSEQEHLF NIQRNE++ L  FI SKGLK+++L 
Sbjct: 383 EIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYEFISSKGLKILNL- 441

Query: 319 SAHAQPAVALARILGN--DDAVDPHLERIKNEAXXXXXXXXXXXXXXXXXXXXSPTDDCG 376
              AQP V + ++L N  DDAVDPHLERIKNEA                    SPTDD G
Sbjct: 442 -GDAQPTVGIKKVLENDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDEGSPTDDSG 500

Query: 377 GENSDANDGGDXXXXXXXXXXXXDLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAM 436
            ++SDA D GD            DL                                RAM
Sbjct: 501 ADDSDATDSGDEKEKPAKKESKKDLPSKASTSKKKSKDDEDGKKRKQKKRKDPNAPKRAM 560

Query: 437 SGFMVFSQMETE---KTNSGMSFTDVGKVLGEKWKKMSAEDKEPYEAKAARDDKKFYMDE 493
           SGFM FS++E E   KTN G+SFTDV +VLGEKWKK+S E+KEPYEAK AR+DKK Y DE
Sbjct: 561 SGFMFFSKLERENLKKTNPGISFTDVSRVLGEKWKKLSVEEKEPYEAK-AREDKKRYKDE 619


>Glyma03g03780.1 
          Length = 606

 Score =  541 bits (1393), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 300/480 (62%), Positives = 335/480 (69%), Gaps = 61/480 (12%)

Query: 19  KDSFREKSFHMPNSNTQYVSDEIMPMADVGDEIMPMADVGDVIMPMADVGDEIMPMADVD 78
           KDS  E SFH+PNSNTQ+V DE  P A V                     D+IM MADV 
Sbjct: 162 KDSLMEISFHIPNSNTQFVGDENRPPAQV-------------------FRDKIMSMADVG 202

Query: 79  AGGEDAVVTFEGIGIFTPRGRYSVELHLSFFRLRGPANDFKIQYSSIVRLYLLPKLNQPR 138
           AGGEDA+VTFEGI I TPRGRYSVELH+SF RL+G ANDFKIQYSS+VRL+LLPK NQP 
Sbjct: 203 AGGEDAIVTFEGIAILTPRGRYSVELHMSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 262

Query: 139 TFVVISLDPPIREGQTLYPHIVMQFESDFVVQCELAINEDLYNTKYNDKLELSYKGLIHG 198
           TFV+ISLDPPIR+GQTLYPHIVMQFE+D+VV+ ELAINEDLYNTK+ DKLELSYKGLIH 
Sbjct: 263 TFVIISLDPPIRKGQTLYPHIVMQFETDYVVESELAINEDLYNTKFKDKLELSYKGLIHE 322

Query: 199 VFTTILCGLSGSKVTKPGTFRSFVHGYAVKSSLKAEEGYLYPLEKSFFFLPKPPTLILHE 258
           VFTTIL GLSG+KVTKPG FRS   GYAVKSSLKAE+G LYPLEKSFFFLPKPPTLILHE
Sbjct: 323 VFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHE 382

Query: 259 EIDYLGFEQHIARGSKICYFHLLIRLKSEQEHLFCNIQRNEFNKLTAFIISKGLKLMDLR 318
           EIDY+ FE+H A GS + YF LLIRLKSEQEHLF NIQRNE++ L  FI SKGLK+M+L 
Sbjct: 383 EIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYEFISSKGLKIMNL- 441

Query: 319 SAHAQPAVALARILGN--DDAVDPHLERIKNEAXXXXXXXXXXXXXXXXXXXXSPTDDCG 376
              AQP V + ++L N  DDAVDPHLERIKNEA                    SPTDD G
Sbjct: 442 -GDAQPTVGIKKVLENDDDDAVDPHLERIKNEAGEDESDEEDSDFVADKDDEGSPTDDSG 500

Query: 377 GENSDANDGGDXXXXXXXXXXXXDLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAM 436
            ++SDA D GD                                              RAM
Sbjct: 501 ADDSDATDSGD----------------------------------EKEAKKDPNAPKRAM 526

Query: 437 SGFMVFSQMETE---KTNSGMSFTDVGKVLGEKWKKMSAEDKEPYEAKAARDDKKFYMDE 493
           SGFM FS++E E   KTN G+SFTDVG+VLGEKWKK+SAE+KEPYEAK AR+DKK YMDE
Sbjct: 527 SGFMFFSKLERENLKKTNPGISFTDVGRVLGEKWKKLSAEEKEPYEAK-AREDKKRYMDE 585


>Glyma13g05140.1 
          Length = 562

 Score =  388 bits (996), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 210/335 (62%), Positives = 234/335 (69%), Gaps = 54/335 (16%)

Query: 19  KDSFREKSFHMPNSNTQYVSDEIMPMADVGDEIMPMADVGDVIMPMADVGDEIMPMADVD 78
           KDS  E SFH+PNSNTQ+V DE  P A V                               
Sbjct: 88  KDSLMEISFHIPNSNTQFVGDENRPPAQVF------------------------------ 117

Query: 79  AGGEDAVVTFEGIGIFTPRGRYSVELHLSF--FRLRGPANDFKIQYSSIVRLYLLPKLNQ 136
               D ++                 LH  F  F L+G ANDFKIQYSS+VRL+LLPK NQ
Sbjct: 118 ---RDKIIN---------------NLHWFFLSFLLQGQANDFKIQYSSVVRLFLLPKSNQ 159

Query: 137 PRTFVVISLDPPIREGQTLYPHIVMQFESDFVVQCELAINEDLYNTKYNDKLELSYKGLI 196
           P TFV+ISLDPPIR+GQTLYPHIVMQFE+D+VVQ ELA+NEDLYNTKY DKLELSYKGLI
Sbjct: 160 PHTFVIISLDPPIRKGQTLYPHIVMQFETDYVVQSELAMNEDLYNTKYKDKLELSYKGLI 219

Query: 197 HGVFTTILCGLSGSKVTKPGTFRSFVHGYAVKSSLKAEEGYLYPLEKSFFFLPKPPTLIL 256
           H VFTTIL GLSG+KVTKPG FRS   GYAVKSSLKAE+G LYPLEKSFFFLPKPPTL L
Sbjct: 220 HEVFTTILHGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLSL 279

Query: 257 HEEIDYLGFEQHIARGSKICYFHLLIRLKSEQEHLFCNIQRNEFNKLTAFIISKGLKLMD 316
           HEEIDY+ FE+H   GS + YF LLIRLKSEQEHLF NIQRNE++ L  FI SKGLK+M+
Sbjct: 280 HEEIDYVEFERHAGGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYEFISSKGLKIMN 339

Query: 317 LRSAHAQPAVALARILGN--DDAVDPHLERIKNEA 349
           L    AQP V + ++L N  DDAVDPHLERIKNEA
Sbjct: 340 L--GDAQPTVGIKKVLENDDDDAVDPHLERIKNEA 372



 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/42 (71%), Positives = 35/42 (83%), Gaps = 3/42 (7%)

Query: 434 RAMSGFMVFSQMETE---KTNSGMSFTDVGKVLGEKWKKMSA 472
           RAMSGFM FS++E E   KTN G+SFTD G+VLGEKWKK+SA
Sbjct: 480 RAMSGFMFFSKLERENLKKTNPGISFTDAGRVLGEKWKKLSA 521


>Glyma01g08120.1 
          Length = 323

 Score =  163 bits (413), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 90/164 (54%), Positives = 101/164 (61%), Gaps = 18/164 (10%)

Query: 224 GYAVKSSLKAEEGYLYPLEKSFFFLPKPPTLILHEEIDYLGFEQHIARGSKICYFHLLIR 283
           GYA+KSSLKAE+G LYPLEK FFFLPKPPTLILHEEIDY+ FE+H+A GS + YF L IR
Sbjct: 69  GYALKSSLKAEDGVLYPLEKRFFFLPKPPTLILHEEIDYVEFERHVAGGSNMHYFDLSIR 128

Query: 284 LKSEQEHLFCNIQRNEFNKLTAFIISKGLKLMDLRSAHAQPAVALARILGNDDAVDPHLE 343
           LKSEQEHL CNIQRNE++ L  FI          R            +  +DD VDPHLE
Sbjct: 129 LKSEQEHLCCNIQRNEYHNLYEFI----------RRCLTYCWYKEGSLFEDDDVVDPHLE 178

Query: 344 RIKNEAXXXXXXXXXXXXXXXXXXXXSPTDDCGGENSDANDGGD 387
           RIKNEA                    SPTDD G  NS  +D GD
Sbjct: 179 RIKNEA--------GGDESDEEDDEGSPTDDSGANNSKGSDNGD 214


>Glyma11g21340.1 
          Length = 333

 Score =  146 bits (369), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/142 (59%), Positives = 98/142 (69%), Gaps = 9/142 (6%)

Query: 212 VTKPGTFRSFVHGYAVKSSLKAEEGYLYPLEKSFFFLPKPPTLILHEEIDYLGFE----- 266
           VTKP   RS   GYAVKSSL+AE+G LYPLEK+FFFLPKPPTLILH+   Y  +      
Sbjct: 65  VTKPRKLRSRQDGYAVKSSLEAEDGILYPLEKNFFFLPKPPTLILHKSDLYDIYTVEILI 124

Query: 267 QHIARGSKICYFHLLIRLKSEQEHLFCNIQRNEFNKLTAFIISKGLKLMDLRSAHAQPAV 326
            H   GS + YF LL RLKSEQEHLF NIQRNE++ L  FI SKGLK+ +L    AQP V
Sbjct: 125 WHAGGGSNMHYFDLLFRLKSEQEHLFRNIQRNEYHNLYEFISSKGLKITNL--GDAQPTV 182

Query: 327 ALARILGN--DDAVDPHLERIK 346
            + ++L N  DDAVD HL+ IK
Sbjct: 183 GIKKVLENDDDDAVDTHLKHIK 204


>Glyma12g12980.1 
          Length = 236

 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/132 (56%), Positives = 87/132 (65%), Gaps = 9/132 (6%)

Query: 218 FRSFVHGYAVKSSLKAEEGYLYPLEKSFFFLPKPPTLILHEEIDYLGFEQHIARGSKICY 277
           FR     YAVKSSLKAE+G LYPL+KSFFFLPKP TLILH+       E+H A GS + Y
Sbjct: 1   FRISQDSYAVKSSLKAEDGILYPLKKSFFFLPKPLTLILHK-------ERHAAGGSNMHY 53

Query: 278 FHLLIRLKSEQEHLFCNIQRNEFNKLTAFIISKGLKLMDLRSAHAQPAVALARILGNDDA 337
           F LLIRLK EQE+LF NIQRN ++ L  F   KGL+  +LR            +  +DDA
Sbjct: 54  FDLLIRLKFEQENLFHNIQRNVYHNLYEFF--KGLEDYELRRCPTYCWYKEGSLFEDDDA 111

Query: 338 VDPHLERIKNEA 349
            DPHLERIKNEA
Sbjct: 112 FDPHLERIKNEA 123


>Glyma01g06920.1 
          Length = 158

 Score = 62.0 bits (149), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 46/105 (43%), Gaps = 15/105 (14%)

Query: 283 RLKSEQEHLFCNIQRNEFNKLTAFIISKGLKLMDLRSAHAQPAVALARILGNDDAVDPHL 342
           RLK EQEH F NIQRNE++ L  FI          R            +  +DDAVDPHL
Sbjct: 15  RLKFEQEHFFRNIQRNEYHNLYEFI----------RRRQTYCWYKEGSLFKDDDAVDPHL 64

Query: 343 ERIKNEAXXXXXXXXXXXXXXXXXXXXSPTDDCGGENSDANDGGD 387
           ERIKNE                     SPTDD     S AND  D
Sbjct: 65  ERIKNEVGGDESDEEDSDFVADKDDEGSPTDD-----SRANDFDD 104