Miyakogusa Predicted Gene

Lj1g3v3554780.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3554780.2 tr|A9TT83|A9TT83_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,32.32,5e-18, ,CUFF.30837.2
         (432 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g02470.1                                                       514   e-146
Glyma06g02510.1                                                       219   4e-57

>Glyma04g02470.1 
          Length = 410

 Score =  514 bits (1324), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 268/441 (60%), Positives = 323/441 (73%), Gaps = 40/441 (9%)

Query: 1   MDPVGVVFDHFKAFAKSGHDFFDGVFRRRNPIEILKRLQRESFSDLMKLRDRQEKVEKIL 60
           M+PV    D   AFAKSG DFFDG+FRRRNP+EILKRLQRE+FSDLMKLR+RQ+KVE++L
Sbjct: 1   MEPV---LDKLNAFAKSGQDFFDGLFRRRNPVEILKRLQREAFSDLMKLRERQDKVERVL 57

Query: 61  SFYKSSNEGPFHEATTRVRGQVDLLGALLFMDNLNQQNVDATNRSGIRSGVNSNFIFETT 120
           SFY+SS  GPF E TT VRGQVD LGALL + NL     DA ++ GIR+GV+S FIFETT
Sbjct: 58  SFYQSSKVGPFQETTTHVRGQVDFLGALLVLGNL-----DAVDKLGIRTGVDSRFIFETT 112

Query: 121 IRQKDTLSAEFVATKKGKEVLDDHDVEVPLSLRKVCYTANVNDFLSLMAIPMGAQCRDVA 180
           +  K T +AEFVA+  G+    +H  E PLSL K+ +TANVND+ S +A+P+GA+CRDVA
Sbjct: 113 MGDKATGAAEFVASHGGRR---EHCEEKPLSLAKLSFTANVNDWFSFVAMPIGARCRDVA 169

Query: 181 VASNSVDQLGKGLTDFSSFGPPLLNLHNGSGIGITVRKSNFIASLAQFVVGLRSSSGSNT 240
           +ASNS  Q+GKGLTDFS FGPPLLNLHNG+  GITVRKSN  ASLAQ V GL     S+ 
Sbjct: 170 IASNSFHQVGKGLTDFSYFGPPLLNLHNGTAFGITVRKSNVTASLAQIVTGLGMPPSSSI 229

Query: 241 MENISSTFGQLVCQFTKGTKLSVLGLHQVPFSSKQHRNFGALAFPIVLSNQDEE--TELV 298
            +N SSTFGQLV QF++G+KLS+LGLH +P SSK+   FGAL  P+++S QDE+  +E V
Sbjct: 230 TDNRSSTFGQLVYQFSRGSKLSILGLHHMPLSSKKLGRFGALTIPLLVSKQDEDEVSEAV 289

Query: 299 RE------RTTQVSAGSIAVMVESELDGFTKIGGWVEMNKLNPKSIQWAITMSDVSEEDV 352
            E        T+V AGSIA+M ESELD FTKIGGWVEM+KLNPK +Q             
Sbjct: 290 PEVLPLIGTKTRVPAGSIALMAESELDDFTKIGGWVEMDKLNPKYLQL------------ 337

Query: 353 LIFLDNLRAITMSDVSEDSFGWGMSLGG-MIGDSASSDHFQAETYLKFNLGDKFCLKPGF 411
                    +T+SDVSEDSFGWG SL G MIG+SA+  HFQAE+YLKFN+G+ FCLKPG 
Sbjct: 338 --------GVTISDVSEDSFGWGTSLSGRMIGNSANEAHFQAESYLKFNMGNNFCLKPGL 389

Query: 412 AYVIDGSSKIGALMIRSNWSL 432
              IDG SK  AL++RSNWSL
Sbjct: 390 VLGIDGKSKTAALVLRSNWSL 410


>Glyma06g02510.1 
          Length = 198

 Score =  219 bits (559), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 124/242 (51%), Positives = 145/242 (59%), Gaps = 46/242 (19%)

Query: 190 GKGLTDFSSFGPPLLNLHNGSGIGITVRKSNFIASLAQFVVGLRSSSGSNTMENISSTFG 249
           GK LTD   FG PLLNLHNG+ IGITVR S                      EN  STFG
Sbjct: 1   GKVLTDLPYFGSPLLNLHNGTAIGITVRNSYMT-------------------ENRCSTFG 41

Query: 250 QLVCQFTKGTKLSVLGLHQVPFSSKQHRNFGALAFPIVLSNQ--DEETELVRERTTQVSA 307
           Q V QF++GTKLS+LGLH +P SSK+  NFGA   P+VLS Q  DE +E VRE       
Sbjct: 42  QPVYQFSRGTKLSILGLHHMPLSSKELGNFGAFTIPLVLSKQYEDEVSEAVREVLP---- 97

Query: 308 GSIAVMVESELDGFTKIGGWVEMNKLNPKSIQWAITMSDVSEEDVLIFLDNLRAITMSDV 367
            S+   ++SE+D FTKIGGWVEM+KLNPK  Q  +T+SDVSE                  
Sbjct: 98  -SMGTKMKSEIDDFTKIGGWVEMDKLNPKYFQLGVTISDVSE------------------ 138

Query: 368 SEDSFGWGMSLGGMIGDSASSDHFQAETYLKFNLGDKFCLKPGFAYVIDGSSKIGALMIR 427
             DSFGWG SL GMIG+S +  HFQAE+YLKFN+G+  CLKP     IDG SK  A M+R
Sbjct: 139 --DSFGWGTSLSGMIGNSINEAHFQAESYLKFNMGNNSCLKPSLVLGIDGKSKTAASMLR 196

Query: 428 SN 429
           SN
Sbjct: 197 SN 198