Miyakogusa Predicted Gene

Lj1g3v3529530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3529530.1 Non Chatacterized Hit- tr|I1HP97|I1HP97_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,35.09,0.001,SUBFAMILY NOT NAMED,NULL; SINGLE STRANDED DNA BINDING
PROTEIN,Sequence-specific single-strand
DNA-bi,NODE_35589_length_721_cov_87.274620.path2.1
         (200 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g46910.2                                                       316   1e-86
Glyma18g36890.1                                                       307   6e-84
Glyma08g46910.1                                                       303   5e-83
Glyma10g18620.1                                                       246   1e-65
Glyma17g30910.1                                                       157   5e-39
Glyma14g16040.1                                                       157   6e-39
Glyma06g07580.1                                                       157   6e-39
Glyma04g07460.1                                                       157   6e-39
Glyma05g08110.1                                                       134   9e-32
Glyma17g12900.1                                                       124   5e-29

>Glyma08g46910.2 
          Length = 769

 Score =  316 bits (810), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 154/200 (77%), Positives = 164/200 (82%), Gaps = 1/200 (0%)

Query: 1   MKPTLAQAQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYE 60
           MK T+AQ QSNWEADKMLDVYI+DY +KRKLH AAKAF+ EGKVSTDPVAIDAPGGFLYE
Sbjct: 1   MKSTMAQNQSNWEADKMLDVYIYDYLMKRKLHAAAKAFVAEGKVSTDPVAIDAPGGFLYE 60

Query: 61  WWSVFWDIFISRTNEKHSEAAASYIETQQIKXXXXXXXXXXXXXXXXXXXX-XXXDPNHP 119
           WWSVFWDIFISRTNEKHSEAAA+YIETQQ K                        DPNHP
Sbjct: 61  WWSVFWDIFISRTNEKHSEAAAAYIETQQTKAREQQLQMQQLQLMQQRSAQLQRRDPNHP 120

Query: 120 ALGGSLNAMNSEGMLGQPPASVLAMKMYEEQMKHPQSMDSDPSPTLSDANRIALLKSATS 179
            LGGS+NAMNSEGMLGQPPASVLAMKMYEE+MKHP SMDS+ SPTL D NR+ALLKSA S
Sbjct: 121 VLGGSINAMNSEGMLGQPPASVLAMKMYEERMKHPHSMDSEASPTLIDPNRMALLKSAAS 180

Query: 180 HQGQLVHGNSGNISTALQQI 199
           HQGQLVHGNSGN+STALQQI
Sbjct: 181 HQGQLVHGNSGNMSTALQQI 200


>Glyma18g36890.1 
          Length = 772

 Score =  307 bits (786), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 149/198 (75%), Positives = 162/198 (81%), Gaps = 1/198 (0%)

Query: 1   MKPTLAQAQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYE 60
           MK T+AQ QSNWEADK LDVYI+DY +KRKLH AAKAF+TEGKVSTDPVAIDAPGGFLYE
Sbjct: 1   MKSTMAQNQSNWEADKRLDVYIYDYLMKRKLHAAAKAFVTEGKVSTDPVAIDAPGGFLYE 60

Query: 61  WWSVFWDIFISRTNEKHSEAAASYIETQQIKXXXXXXXXXXXXXXXXXXXXXXXDPNHPA 120
           WWSVFWDIFISRTNEKHSEAAA+YIE  + +                       DPNHP+
Sbjct: 61  WWSVFWDIFISRTNEKHSEAAAAYIEQTKAR-EQQLQMQQLQLMQQRSAQLQRRDPNHPS 119

Query: 121 LGGSLNAMNSEGMLGQPPASVLAMKMYEEQMKHPQSMDSDPSPTLSDANRIALLKSATSH 180
           LGGS+NAMNSEGMLGQPPASVLAMKMYEE+MKHP SMDS+ SPTL D NR+ALLKSA SH
Sbjct: 120 LGGSINAMNSEGMLGQPPASVLAMKMYEERMKHPHSMDSEASPTLIDPNRMALLKSAASH 179

Query: 181 QGQLVHGNSGNISTALQQ 198
           QGQLVHGNSGN+STALQQ
Sbjct: 180 QGQLVHGNSGNMSTALQQ 197


>Glyma08g46910.1 
          Length = 774

 Score =  303 bits (777), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 147/195 (75%), Positives = 159/195 (81%), Gaps = 1/195 (0%)

Query: 5   LAQAQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSV 64
           +AQ QSNWEADKMLDVYI+DY +KRKLH AAKAF+ EGKVSTDPVAIDAPGGFLYEWWSV
Sbjct: 1   MAQNQSNWEADKMLDVYIYDYLMKRKLHAAAKAFVAEGKVSTDPVAIDAPGGFLYEWWSV 60

Query: 65  FWDIFISRTNEKHSEAAASYIETQQIKXXXXXXXXXXXXXXXXXXXXXXXDPNHPALGGS 124
           FWDIFISRTNEKHSEAAA+YIE  + +                       DPNHP LGGS
Sbjct: 61  FWDIFISRTNEKHSEAAAAYIEQTKAR-EQQLQMQQLQLMQQRSAQLQRRDPNHPVLGGS 119

Query: 125 LNAMNSEGMLGQPPASVLAMKMYEEQMKHPQSMDSDPSPTLSDANRIALLKSATSHQGQL 184
           +NAMNSEGMLGQPPASVLAMKMYEE+MKHP SMDS+ SPTL D NR+ALLKSA SHQGQL
Sbjct: 120 INAMNSEGMLGQPPASVLAMKMYEERMKHPHSMDSEASPTLIDPNRMALLKSAASHQGQL 179

Query: 185 VHGNSGNISTALQQI 199
           VHGNSGN+STALQQI
Sbjct: 180 VHGNSGNMSTALQQI 194


>Glyma10g18620.1 
          Length = 785

 Score =  246 bits (627), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 122/189 (64%), Positives = 141/189 (74%), Gaps = 2/189 (1%)

Query: 8   AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
           AQSNWEADKMLDVYI+DY VK+KLHN AKAFMTEGKVS DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2   AQSNWEADKMLDVYIYDYLVKKKLHNTAKAFMTEGKVSPDPVAIDAPGGFLFEWWSVFWD 61

Query: 68  IFISRTNEKHSEAAASYIETQQIKXXXXXXXXXXXXXXXXXXXXXXXDPNHPALGGSLNA 127
           IFI+RTNEKHSE AA+Y+E QQIK                       D NHP LGG +NA
Sbjct: 62  IFIARTNEKHSETAAAYLEAQQIKAKEQQQLQMQQLQLMRQAQMQRRDSNHPPLGGPVNA 121

Query: 128 MNSEGMLGQPPASVLAMKMYEEQMKHPQSMDSDPSPTLSDANRIALLKSATSHQGQLVHG 187
           + +EG+LGQ  AS LA KMYEE+MKH   MD++ S  L DA R+ALLKS T+H GQ+V G
Sbjct: 122 ITTEGVLGQSTASALAAKMYEERMKHSNPMDTETSQPLLDA-RMALLKS-TNHPGQMVQG 179

Query: 188 NSGNISTAL 196
           NSG+++ AL
Sbjct: 180 NSGSVTAAL 188


>Glyma17g30910.1 
          Length = 903

 Score =  157 bits (398), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 69/84 (82%), Positives = 76/84 (90%)

Query: 8  AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
          +Q+NWEADKMLDVYIHDY VKR L  +A+AF  EGKVS+DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2  SQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWD 61

Query: 68 IFISRTNEKHSEAAASYIETQQIK 91
          IFI+RTNEKHSE AASYIETQ IK
Sbjct: 62 IFIARTNEKHSEVAASYIETQLIK 85


>Glyma14g16040.1 
          Length = 893

 Score =  157 bits (398), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 69/84 (82%), Positives = 76/84 (90%)

Query: 8  AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
          +Q+NWEADKMLDVYIHDY VKR L  +A+AF  EGKVS+DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2  SQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWD 61

Query: 68 IFISRTNEKHSEAAASYIETQQIK 91
          IFI+RTNEKHSE AASYIETQ IK
Sbjct: 62 IFIARTNEKHSEVAASYIETQLIK 85


>Glyma06g07580.1 
          Length = 883

 Score =  157 bits (398), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 69/84 (82%), Positives = 76/84 (90%)

Query: 8  AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
          +Q+NWEADKMLDVYIHDY VKR L  +A+AF  EGKVS+DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2  SQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWD 61

Query: 68 IFISRTNEKHSEAAASYIETQQIK 91
          IFI+RTNEKHSE AASYIETQ IK
Sbjct: 62 IFIARTNEKHSEVAASYIETQLIK 85


>Glyma04g07460.1 
          Length = 903

 Score =  157 bits (398), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 69/84 (82%), Positives = 76/84 (90%)

Query: 8  AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
          +Q+NWEADKMLDVYIHDY VKR L  +A+AF  EGKVS+DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2  SQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWD 61

Query: 68 IFISRTNEKHSEAAASYIETQQIK 91
          IFI+RTNEKHSE AASYIETQ IK
Sbjct: 62 IFIARTNEKHSEVAASYIETQLIK 85


>Glyma05g08110.1 
          Length = 842

 Score =  134 bits (336), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 56/84 (66%), Positives = 68/84 (80%)

Query: 8  AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
          +Q  WEADKMLD+YIHDY +KR+LH  A+ F  EG VST+P+AIDAPGGFL+EWWSVFWD
Sbjct: 2  SQFKWEADKMLDLYIHDYLMKRQLHATARTFQAEGNVSTNPIAIDAPGGFLFEWWSVFWD 61

Query: 68 IFISRTNEKHSEAAASYIETQQIK 91
          I+I+  N+KH EAA S  + QQIK
Sbjct: 62 IYIAMVNQKHPEAAVSCSKNQQIK 85


>Glyma17g12900.1 
          Length = 866

 Score =  124 bits (312), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 53/81 (65%), Positives = 61/81 (75%), Gaps = 7/81 (8%)

Query: 11 NWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWDIFI 70
          NWEADKMLD+YIHDY  KR+LH  A+ F  EG VSTDP+ IDAP GFL+EWWSVFWDI+I
Sbjct: 5  NWEADKMLDLYIHDYLTKRQLHATARIFQAEGNVSTDPIVIDAPSGFLFEWWSVFWDIYI 64

Query: 71 SRTN-------EKHSEAAASY 84
          +R N       +KH EAA SY
Sbjct: 65 ARANQKLQDTAQKHQEAAVSY 85