Miyakogusa Predicted Gene

Lj1g3v3464960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3464960.1 Non Chatacterized Hit- tr|I1JWE9|I1JWE9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.31,0,RAD50-INTERACTING PROTEIN 1 (PROTEIN RINT-1),NULL;
RINT1_TIP20,RINT-1/TIP-1; seg,NULL; RINT1_TIP1,RI,CUFF.30777.1
         (642 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g25590.1                                                      1028   0.0  
Glyma08g47180.1                                                      1019   0.0  
Glyma15g23960.1                                                       383   e-106
Glyma13g04020.1                                                       352   1e-96
Glyma12g15300.1                                                       337   3e-92

>Glyma04g25590.1 
          Length = 796

 Score = 1028 bits (2659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/621 (80%), Positives = 548/621 (88%), Gaps = 4/621 (0%)

Query: 23  SITKTHHQWKHLVSAVDHRVDRALAMLRPHAVADHRAXXXXXXXXXXXXXXXXXXXDARI 82
           SITK H QWKHLVSAVDHRVDRALA+LRP A+A+HRA                   DA  
Sbjct: 179 SITKAHPQWKHLVSAVDHRVDRALAILRPQAIAEHRALLTSLGWPPPLSALTSSNSDAST 238

Query: 83  GNQVLNPLMSMQANLKLKYTENFLALCHLQELQRQRKCRQLKGHHREVALRQPLWVIEEL 142
            NQV+NPL+SM  +LK++Y+ENFLALC+LQELQRQRK RQL+GH REVALRQPLWVIEEL
Sbjct: 239 ANQVVNPLLSMHVDLKVQYSENFLALCNLQELQRQRKARQLEGHDREVALRQPLWVIEEL 298

Query: 143 VNPLTLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDEMLQPLVDEANLVGYSCREEWI 202
           VNPL+LASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDE+LQPLVDEA L+GYSCREEWI
Sbjct: 299 VNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDELLQPLVDEAKLLGYSCREEWI 358

Query: 203 SAMVSSLSTYLAKEIFPSYINQLDEESVTDIQSSARISWLHLIDLMIAFDKRIKSLVECS 262
           SAMV+SL+TYLAKEIFPSYI+QLD ESVT IQSSARISWLHLIDLMIAFDKRIKSLVE S
Sbjct: 359 SAMVTSLTTYLAKEIFPSYISQLDGESVTGIQSSARISWLHLIDLMIAFDKRIKSLVEHS 418

Query: 263 GISLSFDDDDILQRISSLSVFCDCPEWLDQWAKIELADALDKLKPDIENENTWRRKVEVV 322
           GI LSFDDD I+Q+ISSLSVFCD P+WLD WA+IEL D LDKLKPDI++EN WR+KVE V
Sbjct: 419 GILLSFDDD-IMQKISSLSVFCDRPDWLDLWAEIELGDVLDKLKPDIQDENNWRKKVEGV 477

Query: 323 VLSSCTDDHKSPLISSAFLHQLASVVDRCRSLPSITLRSKFLRLVGVPIIRKFFDSILIR 382
           VLSS TDDHKSPL+S+AFL  LASV+DRCRSLPS++LRSKFLRL G+PIIR FFDSILIR
Sbjct: 478 VLSSYTDDHKSPLVSNAFLRHLASVIDRCRSLPSVSLRSKFLRLAGIPIIRNFFDSILIR 537

Query: 383 CQEAEGLTALTDDDAVTKVAISINAAHYFESVLKEWSEDVFFLEMEMGMDEDDKPELSSN 442
           CQEAEGLTALTDDDAV KV IS+NAAHYFESVLKEWSEDVFFLEM  GMDEDDK EL SN
Sbjct: 538 CQEAEGLTALTDDDAVIKVTISVNAAHYFESVLKEWSEDVFFLEM--GMDEDDKTELESN 595

Query: 443 ANT-DEGSPESSRRVIFDXXXXXXXXFRTEWVEKISVVILRGFDARSREYVKNKRQWQKG 501
           +N+  E  PESSRRVIFD        FRTEWVEKIS+VILRGFD+ SR+YVKNKRQWQKG
Sbjct: 596 SNSYGEVLPESSRRVIFDDEIKKLEEFRTEWVEKISLVILRGFDSHSRDYVKNKRQWQKG 655

Query: 502 EEGWAVSKTLIEALDYLQGKMSVVEVGLNSKDFVGVWRSLAAGIDRLIFNGILISNVKFH 561
           EEGWAVSKTLI+ALDYLQ KMSVVEV LN +DF+GVWRSLAAGID+LIFNGILISNVKFH
Sbjct: 656 EEGWAVSKTLIQALDYLQSKMSVVEVSLNGRDFIGVWRSLAAGIDQLIFNGILISNVKFH 715

Query: 562 NGGVERFSSDLDVLFGVFGSWCLRPEGFFPKTSEGLKLLKIDENRVQECMAGGTRWLKEN 621
           N GVERF SDLDVLFGVFG+WCLRPEGFFPK+SEGLKLLK+DENR+QECM GG RWLKEN
Sbjct: 716 NSGVERFGSDLDVLFGVFGAWCLRPEGFFPKSSEGLKLLKMDENRLQECMGGGKRWLKEN 775

Query: 622 GIRHLSLTEAEKVLKSRVFTT 642
           G+R LS+TEAEK+LKSRVFT+
Sbjct: 776 GLRRLSVTEAEKILKSRVFTS 796


>Glyma08g47180.1 
          Length = 796

 Score = 1019 bits (2634), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/619 (80%), Positives = 542/619 (87%), Gaps = 4/619 (0%)

Query: 23  SITKTHHQWKHLVSAVDHRVDRALAMLRPHAVADHRAXXXXXXXXXXXXXXXXXXXDARI 82
           SITK H QWKHLVSAVDHRVDRALA+LRP A+A+HRA                   DAR 
Sbjct: 179 SITKAHPQWKHLVSAVDHRVDRALAILRPQAIAEHRALLASLGWPPPLFALNSLDSDART 238

Query: 83  GNQVLNPLMSMQANLKLKYTENFLALCHLQELQRQRKCRQLKGHHREVALRQPLWVIEEL 142
            NQV NPL++MQ +LK++Y+ENFLALC+LQELQRQRK RQL+GH REVALRQ LWVIEEL
Sbjct: 239 ANQVANPLLTMQVDLKVQYSENFLALCNLQELQRQRKARQLEGHDREVALRQSLWVIEEL 298

Query: 143 VNPLTLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDEMLQPLVDEANLVGYSCREEWI 202
           VNPL+LASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDE+LQPLVDEA L+GYSCREEWI
Sbjct: 299 VNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDELLQPLVDEAKLLGYSCREEWI 358

Query: 203 SAMVSSLSTYLAKEIFPSYINQLDEESVTDIQSSARISWLHLIDLMIAFDKRIKSLVECS 262
           SAMV+SL+TYLAKEIFPSYI+QLDEESV  IQSSARISWLHLIDL IAFDKRIKSLVE S
Sbjct: 359 SAMVTSLTTYLAKEIFPSYISQLDEESVIGIQSSARISWLHLIDLTIAFDKRIKSLVEHS 418

Query: 263 GISLSFDDDDILQRISSLSVFCDCPEWLDQWAKIELADALDKLKPDIENENTWRRKVEVV 322
           GI LSFDDD I+Q+ISSLSVFCD P+WLD WA+IEL DAL KLKPDI++EN WR+KVE V
Sbjct: 419 GILLSFDDD-IMQKISSLSVFCDRPDWLDLWAEIELGDALGKLKPDIQDENNWRKKVEGV 477

Query: 323 VLSSCTDDHKSPLISSAFLHQLASVVDRCRSLPSITLRSKFLRLVGVPIIRKFFDSILIR 382
           VLSS TDDHKSPLIS+AFL  LASV+DRCRSLPS+ LRSKFLR  GVPIIR FFDSILIR
Sbjct: 478 VLSSYTDDHKSPLISNAFLRHLASVIDRCRSLPSVILRSKFLRFAGVPIIRNFFDSILIR 537

Query: 383 CQEAEGLTALTDDDAVTKVAISINAAHYFESVLKEWSEDVFFLEMEMGMDEDDKPELSSN 442
           CQEAEGLTALTDDDAV KV IS+NAAHYFESVLKEWSEDVFFLEM  GMDEDDK EL SN
Sbjct: 538 CQEAEGLTALTDDDAVIKVTISVNAAHYFESVLKEWSEDVFFLEM--GMDEDDKTELESN 595

Query: 443 ANT-DEGSPESSRRVIFDXXXXXXXXFRTEWVEKISVVILRGFDARSREYVKNKRQWQKG 501
           +N+  E  PESSRRVIFD        FRTEWVEKIS+VILRGFD+ SR+YVKNKRQWQKG
Sbjct: 596 SNSYGELLPESSRRVIFDDEIKKLEEFRTEWVEKISLVILRGFDSHSRDYVKNKRQWQKG 655

Query: 502 EEGWAVSKTLIEALDYLQGKMSVVEVGLNSKDFVGVWRSLAAGIDRLIFNGILISNVKFH 561
           EEGW VSKTLIEALDYLQ KMSVVEV LN +DFVGVWRSLAAGIDRLIFNGILISNVKFH
Sbjct: 656 EEGWTVSKTLIEALDYLQSKMSVVEVSLNDRDFVGVWRSLAAGIDRLIFNGILISNVKFH 715

Query: 562 NGGVERFSSDLDVLFGVFGSWCLRPEGFFPKTSEGLKLLKIDENRVQECMAGGTRWLKEN 621
           N GVERF SDL+VLFGVFG+WCLRPEGFFPK+SEGLKLLK+DENRVQECM GG RWLKEN
Sbjct: 716 NSGVERFGSDLEVLFGVFGAWCLRPEGFFPKSSEGLKLLKMDENRVQECMGGGKRWLKEN 775

Query: 622 GIRHLSLTEAEKVLKSRVF 640
           GIR LS+TEAEK+LK+RVF
Sbjct: 776 GIRRLSVTEAEKILKNRVF 794


>Glyma15g23960.1 
          Length = 316

 Score =  383 bits (984), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/256 (74%), Positives = 211/256 (82%), Gaps = 3/256 (1%)

Query: 333 SPLISSAFLHQLASVVDRCRSLPSITLRSKFLRLVGVPIIRKFFDSILIRCQEAEGLTAL 392
           S +I +AFL  LASV+DRCRSLPS+ LRSKFLR   + IIR FFDSILI CQEAEGLTAL
Sbjct: 62  SLMIYNAFLCHLASVIDRCRSLPSVFLRSKFLRFASICIIRNFFDSILIHCQEAEGLTAL 121

Query: 393 TDDDAVTKVAISINAAHYFESVLKEWSEDVFFLEMEMGMDEDDKPELSSNANT-DEGSPE 451
           TDDD V KV ISIN AHYFESVLKEWS+DVFFLEM  GMDEDDK E+ SN+N+  E  PE
Sbjct: 122 TDDDVVIKVTISINVAHYFESVLKEWSKDVFFLEM--GMDEDDKIEMESNSNSYGEFLPE 179

Query: 452 SSRRVIFDXXXXXXXXFRTEWVEKISVVILRGFDARSREYVKNKRQWQKGEEGWAVSKTL 511
           SS+RVIF         +RT+WVEKI +VILRGFD  SR+YVKNKRQWQKG EGW VSKTL
Sbjct: 180 SSKRVIFYDEIKKLEEYRTQWVEKIYLVILRGFDCHSRDYVKNKRQWQKGIEGWIVSKTL 239

Query: 512 IEALDYLQGKMSVVEVGLNSKDFVGVWRSLAAGIDRLIFNGILISNVKFHNGGVERFSSD 571
           IEALDYLQ KMSVVEV L+  DFVGVWRSLAAGIDR IFNGILISNVKFHN GVE+F S+
Sbjct: 240 IEALDYLQSKMSVVEVSLDGGDFVGVWRSLAAGIDRFIFNGILISNVKFHNFGVEKFGSE 299

Query: 572 LDVLFGVFGSWCLRPE 587
           L+VLFG+F +WCLRPE
Sbjct: 300 LEVLFGIFRAWCLRPE 315



 Score =  102 bits (254), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 50/61 (81%), Positives = 57/61 (93%)

Query: 205 MVSSLSTYLAKEIFPSYINQLDEESVTDIQSSARISWLHLIDLMIAFDKRIKSLVECSGI 264
           MV+SL+TYLAKEIFPSYI+QLDEE VT IQSSAR+ WLH+IDLMIAFDKRIKSLV+ SGI
Sbjct: 1   MVTSLTTYLAKEIFPSYISQLDEERVTGIQSSARVLWLHVIDLMIAFDKRIKSLVDHSGI 60

Query: 265 S 265
           +
Sbjct: 61  T 61


>Glyma13g04020.1 
          Length = 825

 Score =  352 bits (902), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 216/644 (33%), Positives = 344/644 (53%), Gaps = 42/644 (6%)

Query: 24  ITKTHHQWKHLVSAVDHRVDRALAMLRPHAVADHRAXXXXXXXXXXXXXXXXXXXDARIG 83
           + K H QW  L+ +VD RVD+ L+ LRP A+ADHRA                        
Sbjct: 197 VVKFHPQWHCLLKSVDTRVDKILSALRPQALADHRALLISLGWPPKLISLKNGSDHI--- 253

Query: 84  NQVLNPLMSMQANLKLKYTENFLALCHLQELQRQRKCRQLKGH--HREVALRQPLWVIEE 141
             + NPL+ MQ + +  Y+++F+ALC LQ LQ +R+ RQL  +   R+    Q LW I+E
Sbjct: 254 TSLPNPLILMQEDKRRNYSQSFIALCALQHLQNRREERQLNSNLIKRDTQNIQ-LWAIDE 312

Query: 142 LVNPLTLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDEMLQPLVDEANLVGYSCREEW 201
           LV+P+    + HF+KW ++PE++F L YK+TRD++  +D++LQPL+D+A L+  S ++ W
Sbjct: 313 LVSPIASRMECHFTKWSEQPEYMFALAYKVTRDFISGIDDVLQPLIDKARLISCSAKDAW 372

Query: 202 ISAMVSSLSTYLAKEIFPSYINQLDEESVTDIQSSARISWLHLIDLMIAFDKRIKSLVEC 261
           +SAMV  LS +L K++F     +     V  ++     SWLHL+DL+IAFDK+++SL+  
Sbjct: 373 VSAMVQMLSGFLEKKVFRFLTERY---KVKHLKPDVSSSWLHLVDLIIAFDKKMQSLLNL 429

Query: 262 SGISLSFDD--DDILQRISSLSVFCDCPEWLDQWAKIELADALDKLKPDIENENTWRRKV 319
               L+     + + + +S LS+FC+ P+WL  WAKIE  +A  KLKP++  E  W    
Sbjct: 430 DTCFLAVPGSFEGLSRGVSVLSIFCNRPDWLKVWAKIEFKNAWKKLKPELIEEKAWITSK 489

Query: 320 EVV--------VLSSCTDDHKSPLISSAFLHQLASVVDRCRSLPSITLRSKFLRLVGVPI 371
           + +         L    +D K+P I+  FL  +  +++RC+++PS    ++F+R      
Sbjct: 490 KCISGIDTEQEFLLLTVEDLKAPPIAEFFLKIIWEMIERCQTMPSSLSHAQFIRFTAGRF 549

Query: 372 IRKFFDSILIRCQEAEGLTALTDDDAVTKVAISINAAHYFESVLKEWSEDVFFLEMEMGM 431
           +  FF  +L R +  E     +DD A+ +V   INAA Y    L+EWS+   FLEM++  
Sbjct: 550 LWYFFKQLLFRFKATELCIDSSDDVAIVRVCGLINAARYIWIKLQEWSDVADFLEMKIVE 609

Query: 432 DEDDKPELSSNANTDEGSPESSRRVIFDXXXXXXXXFRTEWVEKISVVILRGFDARSREY 491
           ++  KP      + D           FD          T W+ +I  V+LR F+  S +Y
Sbjct: 610 NDSSKPTQDDTMDND---------CFFDEEIRSLSEMETNWLMEIIAVVLRQFEMLSWKY 660

Query: 492 VKNKRQWQKGEE--------GWAVSKTLIEALDYLQGKMSVVEVGLNSKDFVGVWRSLAA 543
           V+N   ++  ++           VS   +EALD L   +  V++ LN KDF+ +WRS+A 
Sbjct: 661 VQNNDSFEDDQDYTNPVEDVDLVVSNDFVEALDALDSWLHTVKISLNKKDFLDLWRSIAE 720

Query: 544 GIDRLIFNGILISNVKFHNGGVERFSSDLDVLFGVFGSWCLRPEGFFPKTSE---GLKLL 600
           G+D  I   I+ S   F   GV +F +D+  L  +F  +C RP+ FFP  +E    LKL 
Sbjct: 721 GLDHYISCSIVRSENWFSKMGVYQFEADMQALIFIFQPYCARPQAFFPCINEILKLLKLK 780

Query: 601 KIDENRVQECMA---GGTRWLKENGIRHLSLTEAEKVLKSRVFT 641
           K +   +Q  ++    G+  L   GI HLS+ +  +VL+ +++ 
Sbjct: 781 KEEVKLMQTFLSNNQNGSECLHLYGIYHLSVNQILQVLRYKIWV 824


>Glyma12g15300.1 
          Length = 224

 Score =  337 bits (864), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 173/225 (76%), Positives = 193/225 (85%), Gaps = 3/225 (1%)

Query: 215 KEIFPSYINQLDEESVTDIQSSARISWLHLIDLMIAFDKRIKSLVECSGISLSFDDDDIL 274
           KEIFPSYI QLDEESVT IQSSAR+SWLHLIDL IAF+KRIKSLV+ SGI LSFDDD I+
Sbjct: 1   KEIFPSYIGQLDEESVTGIQSSARLSWLHLIDLKIAFEKRIKSLVDHSGILLSFDDD-IM 59

Query: 275 QRISSLSVFCDCPEWLDQWAKIELADALDKLKPDIENENTWRRKVEVVVLSSCTDDHKSP 334
           Q+ SSLSVFCD P+WLD WA+IEL DAL KLKPDI++EN  R+KV+ VVLSS +DDHKSP
Sbjct: 60  QKNSSLSVFCDHPDWLDLWAEIELGDALGKLKPDIQDENNCRKKVQSVVLSSYSDDHKSP 119

Query: 335 LISSAFLHQLASVVDRCRSLPSITLRSKFLRLVGVPIIRKFFDSILIRCQEAEGLTALTD 394
           LIS+AFL  LAS++DRCRSLPS+ LRSKFLR  GV IIR FFDSILIRCQEA+GLT LTD
Sbjct: 120 LISNAFLRHLASIIDRCRSLPSVFLRSKFLRFRGVSIIRNFFDSILIRCQEAKGLTTLTD 179

Query: 395 DDAVTKVAISINAAHYFESVLKEWSEDVFFLEMEMGMDEDDKPEL 439
           DD+V KV IS+N AH F+ VLKEW EDVFFL  EMGMDEDDK EL
Sbjct: 180 DDSVIKVTISVNVAHSFQFVLKEWFEDVFFL--EMGMDEDDKTEL 222