Miyakogusa Predicted Gene

Lj1g3v3457460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3457460.1 Non Chatacterized Hit- tr|Q9SR26|Q9SR26_ARATH
Putative MYB family transcription factor
OS=Arabidopsi,66.67,0.0000000000001,seg,NULL,
NODE_89199_length_161_cov_19.422359.path2.1
         (63 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g39740.1                                                        81   3e-16
Glyma07g15820.3                                                        79   1e-15
Glyma07g15820.2                                                        79   1e-15

>Glyma18g39740.1 
          Length = 521

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/60 (66%), Positives = 42/60 (70%)

Query: 4  VKSEECCLENKQTTXXXXXXXXXXXXXXLRKSPGICSPASTSTSHRRTTGPIRRAKGGWT 63
          VKSEECC ENKQ+T              + KSP ICSPASTS SHRRTTGPIRRAKGGWT
Sbjct: 5  VKSEECCQENKQSTAASCSSVSEGSGSAIHKSPAICSPASTSPSHRRTTGPIRRAKGGWT 64


>Glyma07g15820.3 
          Length = 200

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/60 (66%), Positives = 42/60 (70%)

Query: 4  VKSEECCLENKQTTXXXXXXXXXXXXXXLRKSPGICSPASTSTSHRRTTGPIRRAKGGWT 63
          VKSEECC ENKQ+T              + KSPG CSPASTS SHRRTTGPIRRAKGGWT
Sbjct: 5  VKSEECCQENKQSTAASCSSVSEGSGSAIHKSPGRCSPASTSPSHRRTTGPIRRAKGGWT 64


>Glyma07g15820.2 
          Length = 153

 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/60 (66%), Positives = 42/60 (70%)

Query: 4  VKSEECCLENKQTTXXXXXXXXXXXXXXLRKSPGICSPASTSTSHRRTTGPIRRAKGGWT 63
          VKSEECC ENKQ+T              + KSPG CSPASTS SHRRTTGPIRRAKGGWT
Sbjct: 5  VKSEECCQENKQSTAASCSSVSEGSGSAIHKSPGRCSPASTSPSHRRTTGPIRRAKGGWT 64