Miyakogusa Predicted Gene

Lj1g3v3446330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3446330.1 Non Chatacterized Hit- tr|I1BP95|I1BP95_RHIO9
Uncharacterized protein OS=Rhizopus delemar (strain
RA,25.14,0.00000000000006,SUBFAMILY NOT NAMED,NULL; NUCLEOPORIN
P54,Nucleoporin Nup54; seg,NULL; Nup54,Nucleoporin Nup54,
alph,CUFF.30820.1
         (360 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g01150.1                                                       556   e-159
Glyma11g37200.1                                                       489   e-138

>Glyma18g01150.1 
          Length = 391

 Score =  556 bits (1434), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 291/389 (74%), Positives = 306/389 (78%), Gaps = 29/389 (7%)

Query: 1   MFG-AQPSSSP-----------SPS---LFGTPSAS----TPAFGTPSSTPAFGTPSSTP 41
           MFG AQPSSSP           +PS    FGTPS++    TP+FGTPSSTPAFGTPSSTP
Sbjct: 1   MFGSAQPSSSPFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPSFGTPSSTPAFGTPSSTP 60

Query: 42  AFGSSLFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXX 91
           AFGSSLFS                                                    
Sbjct: 61  AFGSSLFSTPFSSQPQQQQQQQQQQQQTPLFQQQQTSSAFGFQNSLALAAPQPSLFPNAQ 120

Query: 92  LTTQMANVAPVPYSLPDRDVQAIVDAYKEDPGNPKFAFKHLLFSVTEPQFRMKPAGISDI 151
           LTTQMANVAPVP+SL DRDVQ IVDAYKEDPGNPK+AFKHLLFSVTEPQFR+KPAG+SDI
Sbjct: 121 LTTQMANVAPVPFSLADRDVQTIVDAYKEDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDI 180

Query: 152 MWAEAMGKLEGMESADRERLWPQVVQGFKDLSQRLKIQDEVIASDAERLRVTQSNVKMLQ 211
           MWAEAMGKLEGMESADRERLWPQ+VQGFKDLSQRLKIQDEVI SDAERLR+TQSNVKMLQ
Sbjct: 181 MWAEAMGKLEGMESADRERLWPQLVQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMLQ 240

Query: 212 RHFQADTLPWIQRLKQKEQILQQRLLRVMRIVEALEGKGCRIPLTKGEAELAEKLATITR 271
           RHFQADTLPWI+RLKQKEQILQQRLLRVMRIVEALE KGCRIPLTKGEAELAEKLATITR
Sbjct: 241 RHFQADTLPWIKRLKQKEQILQQRLLRVMRIVEALEEKGCRIPLTKGEAELAEKLATITR 300

Query: 272 QLKGSGAELTRRVQNLLTVSRVQAKSNGFGGPVYLPGSTKIHEQSLTDLQEVLQQQMEAI 331
           QLKGSGAEL+RRVQNLLTVSRV+A SNGFG  VYLPGSTKIHEQSL DLQEVLQQQMEAI
Sbjct: 301 QLKGSGAELSRRVQNLLTVSRVKANSNGFGSSVYLPGSTKIHEQSLGDLQEVLQQQMEAI 360

Query: 332 ARLGSVLKRDVRDMEIMIAEDTGATENGN 360
           ARLGSVLKRD+RDMEIM+ EDT  TENGN
Sbjct: 361 ARLGSVLKRDIRDMEIMMTEDTARTENGN 389


>Glyma11g37200.1 
          Length = 349

 Score =  489 bits (1259), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 234/262 (89%), Positives = 250/262 (95%)

Query: 92  LTTQMANVAPVPYSLPDRDVQAIVDAYKEDPGNPKFAFKHLLFSVTEPQFRMKPAGISDI 151
           LTTQMANVAPVP+SL DRDVQ IVDAYK+DPGNPK+AFKHLLFSVTEPQFR+KPAG+SDI
Sbjct: 86  LTTQMANVAPVPFSLADRDVQTIVDAYKDDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDI 145

Query: 152 MWAEAMGKLEGMESADRERLWPQVVQGFKDLSQRLKIQDEVIASDAERLRVTQSNVKMLQ 211
           MWAEA+GKL+GMES DRERLWPQ+VQGFKDLSQRLKIQDEVI SDAERLR+TQSNVKMLQ
Sbjct: 146 MWAEAIGKLQGMESPDRERLWPQLVQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMLQ 205

Query: 212 RHFQADTLPWIQRLKQKEQILQQRLLRVMRIVEALEGKGCRIPLTKGEAELAEKLATITR 271
           RHFQADTLPWIQRLKQKEQILQQ LLRVMRIVEALE KGCRIPLTKGEAELAEKLATITR
Sbjct: 206 RHFQADTLPWIQRLKQKEQILQQHLLRVMRIVEALEEKGCRIPLTKGEAELAEKLATITR 265

Query: 272 QLKGSGAELTRRVQNLLTVSRVQAKSNGFGGPVYLPGSTKIHEQSLTDLQEVLQQQMEAI 331
           +LKGSGAEL+RRVQNLL VSRV+A SNGFG  VYLPGSTKIHEQSL DLQEVLQQQ+EAI
Sbjct: 266 KLKGSGAELSRRVQNLLIVSRVKANSNGFGSSVYLPGSTKIHEQSLGDLQEVLQQQLEAI 325

Query: 332 ARLGSVLKRDVRDMEIMIAEDT 353
           ARLG+VLKRD+RDMEIM+ EDT
Sbjct: 326 ARLGNVLKRDIRDMEIMMTEDT 347