Miyakogusa Predicted Gene

Lj1g3v3443760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3443760.1 Non Chatacterized Hit- tr|D8TIS6|D8TIS6_VOLCA
Putative uncharacterized protein (Fragment) OS=Volvox
,35.37,0.00000000000001,seg,NULL; PRA1,Prenylated rab acceptor PRA1;
PRA1 PROTEIN,NULL,CUFF.30721.1
         (209 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g16630.1                                                       377   e-105
Glyma18g41120.1                                                       271   4e-73
Glyma07g16630.2                                                       270   9e-73

>Glyma07g16630.1 
          Length = 209

 Score =  377 bits (969), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 188/209 (89%), Positives = 191/209 (91%)

Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRFALPRSSSKWNSRLKCNLYYYRTNYFI 60
           MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRF +PRSSSKWNSRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRFTVPRSSSKWNSRLKCNLYYYRTNYFI 60

Query: 61  LIVSVLILGFLRRPXXXXXXXXXXXXXXXXNDSFAGTFSEKVTRTVRQFSPHLAAKMRPP 120
           LIVSVLILGFLRRP                NDSFAGTFSEKVTRTVRQFSPHLAAKMRPP
Sbjct: 61  LIVSVLILGFLRRPLAIVAALLTALNIAFLNDSFAGTFSEKVTRTVRQFSPHLAAKMRPP 120

Query: 121 LTPVIRGRPAAKRAIYICGRPRWVFVLIFSSASFILWFVSAGLLTVLWALAIGLLATILH 180
           LTPVIRGRP++KRAIYICGRPRWVFVLIFSSASF LWFVSAGLLTVLWALAIGLLATILH
Sbjct: 121 LTPVIRGRPSSKRAIYICGRPRWVFVLIFSSASFFLWFVSAGLLTVLWALAIGLLATILH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209
           ASFRTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209


>Glyma18g41120.1 
          Length = 170

 Score =  271 bits (693), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 137/156 (87%), Positives = 139/156 (89%)

Query: 54  YRTNYFILIVSVLILGFLRRPXXXXXXXXXXXXXXXXNDSFAGTFSEKVTRTVRQFSPHL 113
           YRTNYFILIVSVLILGFLRRP                NDSFAGTFSEKVTRTVRQFSPHL
Sbjct: 15  YRTNYFILIVSVLILGFLRRPLAIVAALLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHL 74

Query: 114 AAKMRPPLTPVIRGRPAAKRAIYICGRPRWVFVLIFSSASFILWFVSAGLLTVLWALAIG 173
           AAKMRPPLTPVIRGRP++KRAIYICGRPRWVFVLIFSSASF LWFVSAGLLTVLWALAIG
Sbjct: 75  AAKMRPPLTPVIRGRPSSKRAIYICGRPRWVFVLIFSSASFFLWFVSAGLLTVLWALAIG 134

Query: 174 LLATILHASFRTPNLKARLNTFREEFRAVWRNYSEL 209
           LLATILHASFRTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 135 LLATILHASFRTPNLKARLNTFREEFRAVWRNYSEL 170


>Glyma07g16630.2 
          Length = 162

 Score =  270 bits (690), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 132/153 (86%), Positives = 135/153 (88%)

Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRFALPRSSSKWNSRLKCNLYYYRTNYFI 60
           MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRF +PRSSSKWNSRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRFTVPRSSSKWNSRLKCNLYYYRTNYFI 60

Query: 61  LIVSVLILGFLRRPXXXXXXXXXXXXXXXXNDSFAGTFSEKVTRTVRQFSPHLAAKMRPP 120
           LIVSVLILGFLRRP                NDSFAGTFSEKVTRTVRQFSPHLAAKMRPP
Sbjct: 61  LIVSVLILGFLRRPLAIVAALLTALNIAFLNDSFAGTFSEKVTRTVRQFSPHLAAKMRPP 120

Query: 121 LTPVIRGRPAAKRAIYICGRPRWVFVLIFSSAS 153
           LTPVIRGRP++KRAIYICGRPRWVFVLIFSS S
Sbjct: 121 LTPVIRGRPSSKRAIYICGRPRWVFVLIFSSVS 153