Miyakogusa Predicted Gene

Lj1g3v3404330.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3404330.1 tr|C1N088|C1N088_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_4148,36.48,1e-17,no description,Mog1/PsbP,
alpha/beta/alpha sandwich; PsbP,Photosystem II PsbP, oxygen evolving
compl,CUFF.30632.1
         (250 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g01610.2                                                       381   e-106
Glyma04g01610.1                                                       372   e-103
Glyma06g01690.1                                                       343   1e-94
Glyma06g01690.2                                                       337   7e-93

>Glyma04g01610.2 
          Length = 244

 Score =  381 bits (978), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 193/254 (75%), Positives = 213/254 (83%), Gaps = 14/254 (5%)

Query: 1   MASISWSCCLHRRPTISDRTASAADKGFSPPITL--EHHKKTPCLLSARNSSIEEGHAVN 58
           MASIS  CC+H R ++ + TA    KG SPP TL  EHHK TPCLLS    SIEEG AVN
Sbjct: 1   MASISRFCCVHMRASLCNFTA---QKGPSPPTTLDLEHHKTTPCLLS----SIEEGRAVN 53

Query: 59  RRQLVFYTSLAAFAAAPSTVLKALALNDVVEDVRIYIDDENKFKIEIPQDWEVGTGD--S 116
           RRQL+ +T +A  A A   V  ALALNDV EDVR+Y DDENKFKIEIPQ+W+VGTGD  S
Sbjct: 54  RRQLILHTPVAVAAFA---VPNALALNDVSEDVRVYTDDENKFKIEIPQEWQVGTGDGES 110

Query: 117 SGFKSLTAFYPKEASSSNVSVAITGLGPDFTKMESFGKVDEFAETLVSGLDRSWRKPPGV 176
           SGFKS+TAFYP  AS+SNVSV ITGLGPDFT+MESFGKVDEFA+TLVSGLDRSWRKPPGV
Sbjct: 111 SGFKSITAFYPTVASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPPGV 170

Query: 177 AAKLINSKSSKGIYYIEYSLQNPGESRRHLYSAIGMATNGWYNRLYTVTGQYVEEETDKY 236
           AAKLI+ KSS GIYYIEYSLQNPGESRR+LYSAIGMA+NGWYNRLYTVTGQYVEEETDKY
Sbjct: 171 AAKLIDCKSSDGIYYIEYSLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQYVEEETDKY 230

Query: 237 ASEIQKAVTSFKFI 250
           AS++QK V SF+FI
Sbjct: 231 ASKVQKVVASFRFI 244


>Glyma04g01610.1 
          Length = 255

 Score =  372 bits (955), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/254 (74%), Positives = 210/254 (82%), Gaps = 14/254 (5%)

Query: 1   MASISWSCCLHRRPTISDRTASAADKGFSPPITL--EHHKKTPCLLSARNSSIEEGHAVN 58
           MASIS  CC+H R ++ + TA    KG SPP TL  EHHK TPCLLS    SIEEG AVN
Sbjct: 1   MASISRFCCVHMRASLCNFTA---QKGPSPPTTLDLEHHKTTPCLLS----SIEEGRAVN 53

Query: 59  RRQLVFYTSLAAFAAAPSTVLKALALNDVVEDVRIYIDDENKFKIEIPQDWEVGTGD--S 116
           RRQL+ +T +A  A A   V  ALALNDV EDVR+Y DDENKFKIEIPQ+W+VGTGD  S
Sbjct: 54  RRQLILHTPVAVAAFA---VPNALALNDVSEDVRVYTDDENKFKIEIPQEWQVGTGDGES 110

Query: 117 SGFKSLTAFYPKEASSSNVSVAITGLGPDFTKMESFGKVDEFAETLVSGLDRSWRKPPGV 176
           SGFKS+TAFYP  AS+SNVSV ITGLGPDFT+MESFGKVDEFA+TLVSGLDRSWRKPPGV
Sbjct: 111 SGFKSITAFYPTVASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPPGV 170

Query: 177 AAKLINSKSSKGIYYIEYSLQNPGESRRHLYSAIGMATNGWYNRLYTVTGQYVEEETDKY 236
           AAKLI+ KSS GIYYIEYSLQNPGESRR+LYSAIGMA+NGWYNRLYTVTGQYVEEETDKY
Sbjct: 171 AAKLIDCKSSDGIYYIEYSLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQYVEEETDKY 230

Query: 237 ASEIQKAVTSFKFI 250
           AS++QK +  F  I
Sbjct: 231 ASKVQKVIFFFFVI 244


>Glyma06g01690.1 
          Length = 248

 Score =  343 bits (880), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 185/256 (72%), Positives = 208/256 (81%), Gaps = 14/256 (5%)

Query: 1   MASISWSCCLHRRPTISDRTASAADKGFSP--PITL--EHHKKTPCLLSARNSSIEEGHA 56
           MA I W  C     ++ + TAS A KG SP  PITL  EHH  TP LLS+     EEG A
Sbjct: 1   MAFI-WRFC---GVSLCNFTASNAQKGPSPSLPITLDLEHHITTPSLLSSIEE--EEGRA 54

Query: 57  VNRRQLVFYTSLAAFAAAPSTVLKALALNDVVEDVRIYIDDENKFKIEIPQDWEVGTGD- 115
           VNRRQL+ +T +AA AA       ALALNDV EDVR+Y DDENKFKIEIP++W+VGTGD 
Sbjct: 55  VNRRQLILHTPVAAAAAFAVP--NALALNDVSEDVRVYTDDENKFKIEIPEEWQVGTGDG 112

Query: 116 -SSGFKSLTAFYPKEASSSNVSVAITGLGPDFTKMESFGKVDEFAETLVSGLDRSWRKPP 174
            SSGFKS+TAFYP +AS+SNVSV ITGLGPDFT+MESFGKVDEFA+TLVSGLDRSWRKPP
Sbjct: 113 ESSGFKSITAFYPTQASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLVSGLDRSWRKPP 172

Query: 175 GVAAKLINSKSSKGIYYIEYSLQNPGESRRHLYSAIGMATNGWYNRLYTVTGQYVEEETD 234
           GVAAKLI+ KSS GIYYIEY LQNPGESRR+LYSAIGMA+NGWYNRLYTVTGQYVEE+TD
Sbjct: 173 GVAAKLIDCKSSNGIYYIEYLLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQYVEEDTD 232

Query: 235 KYASEIQKAVTSFKFI 250
           KYAS++QK V SF+FI
Sbjct: 233 KYASKVQKVVASFRFI 248


>Glyma06g01690.2 
          Length = 247

 Score =  337 bits (864), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 184/256 (71%), Positives = 207/256 (80%), Gaps = 15/256 (5%)

Query: 1   MASISWSCCLHRRPTISDRTASAADKGFSP--PITL--EHHKKTPCLLSARNSSIEEGHA 56
           MA I W  C     ++ + TAS A KG SP  PITL  EHH  TP LLS+     EEG A
Sbjct: 1   MAFI-WRFC---GVSLCNFTASNAQKGPSPSLPITLDLEHHITTPSLLSSIEE--EEGRA 54

Query: 57  VNRRQLVFYTSLAAFAAAPSTVLKALALNDVVEDVRIYIDDENKFKIEIPQDWEVGTGD- 115
           VNRRQL+ +T +AA AA       ALALNDV EDVR+Y DDENKFKIEIP++W+VGTGD 
Sbjct: 55  VNRRQLILHTPVAAAAAFAVP--NALALNDVSEDVRVYTDDENKFKIEIPEEWQVGTGDG 112

Query: 116 -SSGFKSLTAFYPKEASSSNVSVAITGLGPDFTKMESFGKVDEFAETLVSGLDRSWRKPP 174
            SSGFKS+TAFYP +AS+SNVSV ITGLGPDFT+MESFGKVDEFA+TLV GLDRSWRKPP
Sbjct: 113 ESSGFKSITAFYPTQASNSNVSVVITGLGPDFTRMESFGKVDEFAQTLV-GLDRSWRKPP 171

Query: 175 GVAAKLINSKSSKGIYYIEYSLQNPGESRRHLYSAIGMATNGWYNRLYTVTGQYVEEETD 234
           GVAAKLI+ KSS GIYYIEY LQNPGESRR+LYSAIGMA+NGWYNRLYTVTGQYVEE+TD
Sbjct: 172 GVAAKLIDCKSSNGIYYIEYLLQNPGESRRYLYSAIGMASNGWYNRLYTVTGQYVEEDTD 231

Query: 235 KYASEIQKAVTSFKFI 250
           KYAS++QK V SF+FI
Sbjct: 232 KYASKVQKVVASFRFI 247