Miyakogusa Predicted Gene

Lj1g3v3388990.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3388990.1 tr|Q015Z1|Q015Z1_OSTTA Chloroplast channel
forming outer membrane protein (ISS) (Fragment)
OS=Ostreo,35.2,0.000000000000007, ,CUFF.32014.1
         (167 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g01780.1                                                       308   2e-84

>Glyma06g01780.1 
          Length = 167

 Score =  308 bits (788), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 143/167 (85%), Positives = 159/167 (95%)

Query: 1   METSLRYAGDSKALRIHAKEKLRIDTNTFFQVQGELDTRYGQPNSLRALIRHFYPNLSAT 60
           METSLRY  DSKALRIHAK+KLRID+NT+FQ++GELDTR GQP+S  ALIRHFYP+LSAT
Sbjct: 1   METSLRYGEDSKALRIHAKQKLRIDSNTYFQLRGELDTRLGQPSSSSALIRHFYPSLSAT 60

Query: 61  LGVGMRYDKHEKLRYTVVAKKTFPVTINGLVNFKIKGGCDVDKEFKERKSRGAAEFSWSV 120
           LGVG+RYDK +KLRYTV AKKTFPVT++GL+NFKIKGGCDVDK+FKERKSRGAAEFSW+V
Sbjct: 61  LGVGVRYDKRDKLRYTVSAKKTFPVTVDGLLNFKIKGGCDVDKDFKERKSRGAAEFSWNV 120

Query: 121 FNFQKDQDVRLRVGYEIFDQVPYLQIRENNWTFNADYKGRWNVRYDL 167
           FNFQKDQDVRLR+GYE+FDQVPYLQIRENNWT NADYKGRWNVRYDL
Sbjct: 121 FNFQKDQDVRLRIGYEVFDQVPYLQIRENNWTVNADYKGRWNVRYDL 167