Miyakogusa Predicted Gene

Lj1g3v3385850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3385850.1 Non Chatacterized Hit- tr|J3M0S4|J3M0S4_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G2,40.94,0.00000000000002,seg,NULL,TC62369.path1.1
         (171 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g01810.1                                                       254   4e-68
Glyma04g01720.1                                                       251   2e-67

>Glyma06g01810.1 
          Length = 659

 Score =  254 bits (648), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 127/171 (74%), Positives = 137/171 (80%), Gaps = 1/171 (0%)

Query: 1   MSNFSSPQVSNFAPSPGLKPDLNRDHFNPMYQQPSGNQSPSSAKESERNVNPVHENGARV 60
           MSN SSPQVSN  PSP  +P LNRDHFNPMYQQPSGNQSPSS K  E N+NPVH+N AR 
Sbjct: 488 MSNISSPQVSNLTPSPMQRPSLNRDHFNPMYQQPSGNQSPSSGKGIEGNINPVHDNVARA 547

Query: 61  PMRSNRLAIPENRRSSVFWDQAAGRFVXXXXXXXXXXXXXXTELLYTGRNIFFGSPVVNE 120
           PMRSN L + +NRRSSVFWDQ AGRFV              TELLYTGR+IFFGSPVVNE
Sbjct: 548 PMRSNTLGVSDNRRSSVFWDQEAGRFVSSSSRGPGSSQIPGTELLYTGRSIFFGSPVVNE 607

Query: 121 QPTTGTRNSSSVVAGISDRDSMS-RDFQQGRSHRGAQLPVFVPGYSQQNKF 170
           QP+TGTR+SSSVVAGI DRDS + RDFQQGRSHRG QLPVFVPGY+QQNKF
Sbjct: 608 QPSTGTRSSSSVVAGIPDRDSSTLRDFQQGRSHRGGQLPVFVPGYAQQNKF 658


>Glyma04g01720.1 
          Length = 642

 Score =  251 bits (642), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 131/173 (75%), Positives = 142/173 (82%), Gaps = 9/173 (5%)

Query: 1   MSNFSSPQVSNFAPSPGLKPDLNRDHFNPMYQQPSGNQSPSSAKESERNVNPVHENGARV 60
           MSNFSSP+VSN  PSP  +P LNRDHFNPMYQQPSGNQSPSSAK SE N+NPVH+N  RV
Sbjct: 475 MSNFSSPRVSNLTPSPMQRPGLNRDHFNPMYQQPSGNQSPSSAKGSEGNINPVHDNVPRV 534

Query: 61  PMRSNRLAIPENRRSSVFWDQAAGRFVXXXXXXXXXXXXXXTELLYTGRNIFFGSPVVNE 120
           PMRSN LA+ +NRRSSVFWDQAAGRFV              TELLYTGR+IFFGSPVVNE
Sbjct: 535 PMRSNTLAVSDNRRSSVFWDQAAGRFV------SSSSRGPGTELLYTGRSIFFGSPVVNE 588

Query: 121 QPTTGTRNSSSVVAGISDRDSMS-RDFQQGRSHRGAQLPVFVP--GYSQQNKF 170
           QP+TGTR+SSSVVAGI DRDS + RDFQQGRSHRG QLPVFVP  GY+QQNKF
Sbjct: 589 QPSTGTRSSSSVVAGIPDRDSSTLRDFQQGRSHRGGQLPVFVPGCGYAQQNKF 641