Miyakogusa Predicted Gene

Lj1g3v3385820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3385820.1 Non Chatacterized Hit- tr|B9S263|B9S263_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,44.36,4e-18,coiled-coil,NULL; seg,NULL,CUFF.30603.1
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g01740.1                                                       201   2e-52
Glyma11g09260.1                                                       120   8e-28
Glyma01g36180.1                                                       118   2e-27
Glyma06g01840.1                                                        76   2e-14
Glyma11g01080.1                                                        54   7e-08
Glyma01g44450.2                                                        54   7e-08
Glyma01g44450.3                                                        54   8e-08
Glyma01g44450.1                                                        49   3e-06

>Glyma04g01740.1 
          Length = 163

 Score =  201 bits (512), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 106/147 (72%), Positives = 111/147 (75%), Gaps = 1/147 (0%)

Query: 18  INKVDHSRVMIKPSGLSQNLNCQGRTQLSLTRRPLTVQATYSDGGRPXXXXXXXXXXXXX 77
           INKVDHS V IKP   S NLN QG  Q SLTRRPLT+QATYSDGGRP             
Sbjct: 17  INKVDHSLVKIKPYNFSLNLNRQGTMQTSLTRRPLTIQATYSDGGRPSSASVFVGGFLLG 76

Query: 78  XXXXXXXXXXYAPQISKALAGADKKELMRKLPKFIYDEEKALEKTRKVLAEKIEQLNAAI 137
                     YAPQISKALAGAD+KELMRKLPKFIYDEEKALEKTRKVLAEKIEQLNAAI
Sbjct: 77  GLIVGTLGCVYAPQISKALAGADRKELMRKLPKFIYDEEKALEKTRKVLAEKIEQLNAAI 136

Query: 138 DEVSSQLRSEDEGPNGVAVNSDELEAA 164
           D+VS+QLRSE E  NGVAVNSDE+EAA
Sbjct: 137 DDVSAQLRSE-EASNGVAVNSDEIEAA 162


>Glyma11g09260.1 
          Length = 165

 Score =  120 bits (300), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 65/115 (56%), Positives = 79/115 (68%), Gaps = 2/115 (1%)

Query: 50  RPLTVQATYSDGGRPXXXXXXXXXXXXXXXXXXXXXXXYAPQISKALAGADKKELMRKLP 109
           +PL ++A   DGGRP                       YAPQIS+ALAGAD K+LMRKLP
Sbjct: 52  QPLVIRAG-GDGGRPSSGSGFVGGFVLGGLIVGALGCLYAPQISRALAGADSKDLMRKLP 110

Query: 110 KFIYDEEKALEKTRKVLAEKIEQLNAAIDEVSSQLRSEDEGPNGVAVNSDELEAA 164
           KF+YDEEKALE+TRKVL EKI QLN+AID VS+QLR  DE  N +A+NS+E+EA+
Sbjct: 111 KFMYDEEKALERTRKVLTEKIAQLNSAIDGVSAQLR-PDEDSNEIALNSEEIEAS 164


>Glyma01g36180.1 
          Length = 176

 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 5/142 (3%)

Query: 21  VDHSRVMIKPSGLSQNLNCQGRTQLSLTRRPLTVQATYSDGGRPXXXXXXXXXXXXXXXX 80
           +D   + I  SG   + + + +   + + +PL ++A   DGGRP                
Sbjct: 27  MDKCFLKISTSGHFTDFSLRAK---ATSNQPLVIRAG-GDGGRPSSGSIFVGGFVLGGLI 82

Query: 81  XXXXXXXYAPQISKALAGADKKELMRKLPKFIYDEEKALEKTRKVLAEKIEQLNAAIDEV 140
                  YAPQIS+ALAGAD K+LMRKLPKF+YDEEKALE+TR+VL EKI QLN+AID V
Sbjct: 83  AGALGCLYAPQISRALAGADSKDLMRKLPKFMYDEEKALERTREVLTEKIAQLNSAIDGV 142

Query: 141 SSQLRSEDEGPNGVAVNSDELE 162
           S+QLR  DE  N +AVNS+E+E
Sbjct: 143 SAQLR-PDEDSNEIAVNSEEIE 163


>Glyma06g01840.1 
          Length = 102

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 42/75 (56%)

Query: 18 INKVDHSRVMIKPSGLSQNLNCQGRTQLSLTRRPLTVQATYSDGGRPXXXXXXXXXXXXX 77
          INK+DHS V IKP   S NLN  GR + SLTRRPLT+QATYSDGGRP             
Sbjct: 17 INKLDHSLVKIKPYSFSLNLNRLGRMETSLTRRPLTIQATYSDGGRPSSASVFVGGFLLG 76

Query: 78 XXXXXXXXXXYAPQI 92
                    YAPQ+
Sbjct: 77 GLIVGTLGCVYAPQV 91


>Glyma11g01080.1 
          Length = 154

 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 2/76 (2%)

Query: 88  YAPQISKALAGADKKELMRKLPKFIYDEEKALEKTRKVLAEKIEQLNAAIDEVSSQLRSE 147
           +APQI ++L   D+    +      YDE   LE+TR+ L EKI QLN+AID VSS+LR  
Sbjct: 79  FAPQIRRSLLNEDEYGFRKAKRPIYYDE--GLERTRQTLNEKIGQLNSAIDNVSSRLRGG 136

Query: 148 DEGPNGVAVNSDELEA 163
           +  P     +  E+EA
Sbjct: 137 NNVPAAKIESDPEVEA 152


>Glyma01g44450.2 
          Length = 153

 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 2/76 (2%)

Query: 88  YAPQISKALAGADKKELMRKLPKFIYDEEKALEKTRKVLAEKIEQLNAAIDEVSSQLRSE 147
           +APQI ++L   D+    +      YDE   LE+TR+ L EKI QLN+AID VSS+LR  
Sbjct: 78  FAPQIRRSLLNEDEYGFRKAKRPIYYDE--GLERTRQTLNEKIGQLNSAIDNVSSRLRGG 135

Query: 148 DEGPNGVAVNSDELEA 163
           +  P     +  E+EA
Sbjct: 136 NNVPAAKIESDPEVEA 151


>Glyma01g44450.3 
          Length = 150

 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 2/76 (2%)

Query: 88  YAPQISKALAGADKKELMRKLPKFIYDEEKALEKTRKVLAEKIEQLNAAIDEVSSQLRSE 147
           +APQI ++L   D+    +      YDE   LE+TR+ L EKI QLN+AID VSS+LR  
Sbjct: 75  FAPQIRRSLLNEDEYGFRKAKRPIYYDE--GLERTRQTLNEKIGQLNSAIDNVSSRLRGG 132

Query: 148 DEGPNGVAVNSDELEA 163
           +  P     +  E+EA
Sbjct: 133 NNVPAAKIESDPEVEA 148


>Glyma01g44450.1 
          Length = 157

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 2/76 (2%)

Query: 88  YAPQISKALAGADKKELMRKLPKFIYDEEKALEKTRKVLAEKIEQLNAAIDEVSSQLRSE 147
           +  QI ++L   D+    +      YDE   LE+TR+ L EKI QLN+AID VSS+LR  
Sbjct: 82  FVMQIRRSLLNEDEYGFRKAKRPIYYDE--GLERTRQTLNEKIGQLNSAIDNVSSRLRGG 139

Query: 148 DEGPNGVAVNSDELEA 163
           +  P     +  E+EA
Sbjct: 140 NNVPAAKIESDPEVEA 155