Miyakogusa Predicted Gene

Lj1g3v3384780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3384780.1 Non Chatacterized Hit- tr|D8TWF0|D8TWF0_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,35.8,8e-16,seg,NULL; DUF3456,Domain of unknown function DUF3456;
MIR-INTERACTING SAPOSIN-LIKE PROTEIN,NULL,CUFF.30619.1
         (187 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g01880.1                                                       246   1e-65
Glyma04g01780.1                                                        78   5e-15

>Glyma06g01880.1 
          Length = 191

 Score =  246 bits (628), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 123/166 (74%), Positives = 131/166 (78%)

Query: 22  SNAIDDKCAACKAVAEELEIGLSREKPRNHLDMRHRLDSKGQRQGKLIDYRVSDLRVVEL 81
           S+A+DDKCAACKAVAEELEIGLS E+PRNHLDMRHRLDSKGQR+GKLIDYRVS+LRVVEL
Sbjct: 26  SDAVDDKCAACKAVAEELEIGLSTERPRNHLDMRHRLDSKGQREGKLIDYRVSELRVVEL 85

Query: 82  LDGLCEKMQDYTLMIDTDTYEWFKVDSWDNLTKNKQEARAYSKDISSYCGRXXXXXXXXX 141
           LDGLCEKMQDYTL IDT+TYEWFKVDSWDNLT NKQEARAYSKDISSYCGR         
Sbjct: 86  LDGLCEKMQDYTLKIDTNTYEWFKVDSWDNLTTNKQEARAYSKDISSYCGRLLEETEDEF 145

Query: 142 XXXIXXXXXXXXXXXXXLCQDLSKHCSRTRVSHEAEVVDDGDKEEL 187
              I             LCQDLSKHCS+  VS+ AEV DDG   EL
Sbjct: 146 AELIKKGSVKVGGVSKVLCQDLSKHCSQMSVSYAAEVDDDGHDGEL 191


>Glyma04g01780.1 
          Length = 38

 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 35/37 (94%), Positives = 36/37 (97%)

Query: 96  IDTDTYEWFKVDSWDNLTKNKQEARAYSKDISSYCGR 132
           IDT+TYEWFKVDSWDNLT NKQEARAYSKDISSYCGR
Sbjct: 1   IDTNTYEWFKVDSWDNLTTNKQEARAYSKDISSYCGR 37