Miyakogusa Predicted Gene

Lj1g3v3384570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3384570.1 Non Chatacterized Hit- tr|F6I0L4|F6I0L4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,53.85,5e-19,CBS-domain,NULL; CBS,Cystathionine beta-synthase,
core; no description,NULL,CUFF.30584.1
         (78 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g01390.1                                                       118   1e-27

>Glyma06g01390.1 
          Length = 85

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/70 (78%), Positives = 63/70 (90%)

Query: 9  MDSPATNKENDTLKQVMEHMTQTNSSFSFVINDTKQVTGLLTLRDIILQFAPPGVNSTIH 68
          MD P  NKE +TLKQ+MEH T+TNSSFSF+IND +QVTGLLTLRDIILQFAPP +NS+I+
Sbjct: 1  MDLPVANKETETLKQIMEHTTETNSSFSFLINDNEQVTGLLTLRDIILQFAPPNMNSSIN 60

Query: 69 GGGFFEFALE 78
          GGGFFEFALE
Sbjct: 61 GGGFFEFALE 70