Miyakogusa Predicted Gene

Lj1g3v3329000.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3329000.1 Non Chatacterized Hit- tr|Q2JNV7|Q2JNV7_SYNJB
Putative membrane protein OS=Synechococcus sp.
(strain,32.54,1e-16,UNCHARACTERIZED,NULL; SNARE_assoc,SNARE associated
Golgi protein; seg,NULL,CUFF.30361.1
         (238 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g53640.1                                                       336   1e-92
Glyma08g47850.1                                                       305   4e-83
Glyma08g26000.2                                                        49   4e-06
Glyma08g26000.1                                                        49   4e-06

>Glyma18g53640.1 
          Length = 239

 Score =  336 bits (861), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 170/234 (72%), Positives = 194/234 (82%), Gaps = 2/234 (0%)

Query: 1   MGR-WWLKXXXXXXXXXXLWRTWNSNGSWDKEAALKWMSEWSERLGVWAIPLFISLHTLS 59
           MGR WW K          +WR W   G +DKEAA  ++ EWSE+LG+WAIPL++SLHT+S
Sbjct: 1   MGRGWWWKVAVLGVLVAVVWRGWQGGG-FDKEAAFSFVREWSEKLGIWAIPLYLSLHTVS 59

Query: 60  IALCLPSAIFLETGASILFGFFPSVLCVFSAKILAASLSFWIGRLVFRNSTSAMDWARRN 119
           IALCLPSAIF ET A +LFGF PSV CVFSAKILAASLSF IGRLVFR+S+SAM+WA+RN
Sbjct: 60  IALCLPSAIFFETTAPLLFGFLPSVFCVFSAKILAASLSFSIGRLVFRSSSSAMEWAQRN 119

Query: 120 KYFILLSKGVERDGWKFVLLARFSPVPSYIINYTLAATEVGFVLDFLLPTIIGCVPMILQ 179
           KYF L+S+GVERDGWKFVLLARFSPVPSY+INYTLAAT+V F+LDFLLPT IGC+PMILQ
Sbjct: 120 KYFHLISRGVERDGWKFVLLARFSPVPSYVINYTLAATDVRFLLDFLLPTAIGCLPMILQ 179

Query: 180 NTSIGSLAGAAYATASGSKKSQIWSYVFPMVGXXXXXXXXXRIKKYSTQVSLDK 233
           NTSIGSLAGAA ATASGSKKSQIWSY+FP+VG         RIKKYSTQVS+ +
Sbjct: 180 NTSIGSLAGAAVATASGSKKSQIWSYIFPVVGILSSVVISLRIKKYSTQVSVSE 233


>Glyma08g47850.1 
          Length = 239

 Score =  305 bits (780), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 165/234 (70%), Positives = 191/234 (81%), Gaps = 2/234 (0%)

Query: 1   MGR-WWLKXXXXXXXXXXLWRTWNSNGSWDKEAALKWMSEWSERLGVWAIPLFISLHTLS 59
           MGR WW K          +WR W   G  +KE+A  ++ EWSE+LG+WAIPL++SLHT+S
Sbjct: 1   MGRGWWWKVAVLAVVVAVVWRGWQVGG-LEKESAFNFVREWSEKLGIWAIPLYVSLHTVS 59

Query: 60  IALCLPSAIFLETGASILFGFFPSVLCVFSAKILAASLSFWIGRLVFRNSTSAMDWARRN 119
           IALCLPSAIF ET A +LFGF PSV CVFSAKILAASLSF IGRLVFR+S+SAM+WA+RN
Sbjct: 60  IALCLPSAIFFETAAPLLFGFLPSVFCVFSAKILAASLSFSIGRLVFRSSSSAMEWAQRN 119

Query: 120 KYFILLSKGVERDGWKFVLLARFSPVPSYIINYTLAATEVGFVLDFLLPTIIGCVPMILQ 179
           +YF L+S+GVERDGWKFVLLARFSPVPSY+INYTLAAT+V F+LDF LPT IGC+PMILQ
Sbjct: 120 RYFHLISRGVERDGWKFVLLARFSPVPSYVINYTLAATDVRFLLDFFLPTAIGCLPMILQ 179

Query: 180 NTSIGSLAGAAYATASGSKKSQIWSYVFPMVGXXXXXXXXXRIKKYSTQVSLDK 233
           NTSIGSLAGAA A+ASGSKKSQIWSY FP+VG         RIKKYSTQVS+ +
Sbjct: 180 NTSIGSLAGAAVASASGSKKSQIWSYFFPVVGILSSVVISLRIKKYSTQVSVSE 233


>Glyma08g26000.2 
          Length = 335

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 5/143 (3%)

Query: 34  LKWMSEWSERLGVWAIPLFISLHTLSIALCLPSAIFLETGASILFGFFPSVLCVFSAKIL 93
           L  +S + E  G     LF++++     L +P AI L   A +LFG     + V  +  +
Sbjct: 136 LNHLSVFIEGYGPAGYALFVAVYAGLEILAIP-AIPLTMSAGLLFGSVVGTIIVSISGTV 194

Query: 94  AASLSFWIGRLVFRNSTSAMDWARRNKYFILLSKGVERDGWKFVLLARFSP-VPSYIINY 152
           AAS++F I R   R     +     NK F+ + K +  +G++ V L R SP +P  + NY
Sbjct: 195 AASVAFLIARYFARERI--VKLVEGNKKFVAIDKAIGENGFRVVTLLRLSPLLPFSLGNY 252

Query: 153 TLAATEVGFVLDFLLPTIIGCVP 175
               T V F+  ++L + +G +P
Sbjct: 253 LYGLTSVKFI-PYVLGSWLGMLP 274


>Glyma08g26000.1 
          Length = 335

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 5/143 (3%)

Query: 34  LKWMSEWSERLGVWAIPLFISLHTLSIALCLPSAIFLETGASILFGFFPSVLCVFSAKIL 93
           L  +S + E  G     LF++++     L +P AI L   A +LFG     + V  +  +
Sbjct: 136 LNHLSVFIEGYGPAGYALFVAVYAGLEILAIP-AIPLTMSAGLLFGSVVGTIIVSISGTV 194

Query: 94  AASLSFWIGRLVFRNSTSAMDWARRNKYFILLSKGVERDGWKFVLLARFSP-VPSYIINY 152
           AAS++F I R   R     +     NK F+ + K +  +G++ V L R SP +P  + NY
Sbjct: 195 AASVAFLIARYFARERI--VKLVEGNKKFVAIDKAIGENGFRVVTLLRLSPLLPFSLGNY 252

Query: 153 TLAATEVGFVLDFLLPTIIGCVP 175
               T V F+  ++L + +G +P
Sbjct: 253 LYGLTSVKFI-PYVLGSWLGMLP 274