Miyakogusa Predicted Gene

Lj1g3v3328730.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3328730.1 tr|D7DVX0|D7DVX0_NOSA0 Probable 30S ribosomal
protein PSRP-3 OS=Nostoc azollae (strain 0708)
GN=Aazo,53.16,2e-19,PSRP-3_Ycf65,Ribosomal protein PSRP-3/Ycf65;
RRP3_SPIOL_P82412;,Ribosomal protein PSRP-3/Ycf65; seg,,CUFF.30431.1
         (175 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g47990.1                                                       193   6e-50
Glyma08g47990.2                                                       189   1e-48

>Glyma08g47990.1 
          Length = 158

 Score =  193 bits (491), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 92/98 (93%), Positives = 96/98 (97%)

Query: 78  SPPPQKLGVVVKPTDKPRLVLKFIWMEKNIGIALDQAVPGHGTIPLSPYYFWPRKDAWEE 137
           +P P+KLGVVVKPT+KPRLVLKFIWMEKNIGIALDQ VPGHGTIPLSPYYFWPRKDAWEE
Sbjct: 61  TPQPEKLGVVVKPTEKPRLVLKFIWMEKNIGIALDQMVPGHGTIPLSPYYFWPRKDAWEE 120

Query: 138 LKELLESKPWISQKQMIILLNQATDIINLWQQSGGNLS 175
           LKELLE+KPWISQKQMIILLNQATDIINLWQQSGGNLS
Sbjct: 121 LKELLENKPWISQKQMIILLNQATDIINLWQQSGGNLS 158


>Glyma08g47990.2 
          Length = 157

 Score =  189 bits (481), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 92/106 (86%), Positives = 98/106 (92%), Gaps = 3/106 (2%)

Query: 73  DDTSLSPPPQ---KLGVVVKPTDKPRLVLKFIWMEKNIGIALDQAVPGHGTIPLSPYYFW 129
           + T+ + PP    +LGVVVKPT+KPRLVLKFIWMEKNIGIALDQ VPGHGTIPLSPYYFW
Sbjct: 52  ETTAFAAPPTPQPELGVVVKPTEKPRLVLKFIWMEKNIGIALDQMVPGHGTIPLSPYYFW 111

Query: 130 PRKDAWEELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNLS 175
           PRKDAWEELKELLE+KPWISQKQMIILLNQATDIINLWQQSGGNLS
Sbjct: 112 PRKDAWEELKELLENKPWISQKQMIILLNQATDIINLWQQSGGNLS 157