Miyakogusa Predicted Gene

Lj1g3v3328720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3328720.1 tr|I0J3L1|I0J3L1_9EUGL Probable 30S ribosomal
protein PSRP-3 OS=Eutreptiella gymnastica GN=ycf65
PE=,56.58,2e-19,PSRP-3_Ycf65,Ribosomal protein PSRP-3/Ycf65;
RRP3_SPIOL_P82412;,Ribosomal protein PSRP-3/Ycf65,CUFF.30430.1
         (99 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g47990.1                                                       189   6e-49
Glyma08g47990.2                                                       187   3e-48

>Glyma08g47990.1 
          Length = 158

 Score =  189 bits (480), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 90/94 (95%), Positives = 93/94 (98%)

Query: 6   QKLGVVVKPTDKPRLVLKFIWMEKNIGIALDQAVPGHGTIPLSPYYFWPRKDAWEELKEL 65
           +KLGVVVKPT+KPRLVLKFIWMEKNIGIALDQ VPGHGTIPLSPYYFWPRKDAWEELKEL
Sbjct: 65  EKLGVVVKPTEKPRLVLKFIWMEKNIGIALDQMVPGHGTIPLSPYYFWPRKDAWEELKEL 124

Query: 66  LESKPWISQKQMIILLNQATDIINLWQQSGGNLS 99
           LE+KPWISQKQMIILLNQATDIINLWQQSGGNLS
Sbjct: 125 LENKPWISQKQMIILLNQATDIINLWQQSGGNLS 158


>Glyma08g47990.2 
          Length = 157

 Score =  187 bits (474), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 89/93 (95%), Positives = 92/93 (98%)

Query: 7   KLGVVVKPTDKPRLVLKFIWMEKNIGIALDQAVPGHGTIPLSPYYFWPRKDAWEELKELL 66
           +LGVVVKPT+KPRLVLKFIWMEKNIGIALDQ VPGHGTIPLSPYYFWPRKDAWEELKELL
Sbjct: 65  ELGVVVKPTEKPRLVLKFIWMEKNIGIALDQMVPGHGTIPLSPYYFWPRKDAWEELKELL 124

Query: 67  ESKPWISQKQMIILLNQATDIINLWQQSGGNLS 99
           E+KPWISQKQMIILLNQATDIINLWQQSGGNLS
Sbjct: 125 ENKPWISQKQMIILLNQATDIINLWQQSGGNLS 157