Miyakogusa Predicted Gene

Lj1g3v3328690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3328690.1 Non Chatacterized Hit- tr|I1KZL0|I1KZL0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,66.27,4e-19,
,CUFF.30422.1
         (106 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g53480.1                                                       102   9e-23
Glyma08g48000.1                                                        99   1e-21
Glyma01g20860.1                                                        72   2e-13
Glyma08g29470.1                                                        62   1e-10

>Glyma18g53480.1 
          Length = 442

 Score =  102 bits (254), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 49/58 (84%), Positives = 53/58 (91%)

Query: 1  MGLLGKSFTSKFRSITTLAISRIAILMNQHKARASHARSDVAQFLNLGYQDRALLRVK 58
          MGLLGKSFTSKF+SIT LA+SRI IL NQHKARAS+ARSDVAQ LNLGY DRALLRV+
Sbjct: 1  MGLLGKSFTSKFKSITLLAVSRIVILKNQHKARASYARSDVAQLLNLGYHDRALLRVE 58


>Glyma08g48000.1 
          Length = 425

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/83 (66%), Positives = 62/83 (74%), Gaps = 1/83 (1%)

Query: 1  MGLLGKSFTSKFRSITTLAISRIAILMNQHKARASHARSDVAQFLNLGYQDRALLRVKLQ 60
          MGLLGKSFTSKF+SITTLA+SRI IL NQHKARAS+ARSDVAQ L+LGY DRALLRV+  
Sbjct: 1  MGLLGKSFTSKFKSITTLAVSRIVILKNQHKARASYARSDVAQLLDLGYHDRALLRVEQW 60

Query: 61 PFSSNNNLFFLRINSEFQKLLKE 83
              N    F  I S +   L+E
Sbjct: 61 VIEQNMLEVFAMIES-YSNFLRE 82


>Glyma01g20860.1 
          Length = 403

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 1/85 (1%)

Query: 2  GLLGKSF-TSKFRSITTLAISRIAILMNQHKARASHARSDVAQFLNLGYQDRALLRVKLQ 60
           LLG++F  SKF++I  LAISR+A+L NQ +AR  HARSDV + L LG+Q+RA LRV+  
Sbjct: 7  ALLGRTFKVSKFKAIVNLAISRLAVLKNQRQARLRHARSDVLELLQLGHQERASLRVEHV 66

Query: 61 PFSSNNNLFFLRINSEFQKLLKEVY 85
              N    + RI   F  L++ V+
Sbjct: 67 IKDQNMLDVYGRIEGYFNLLIERVH 91


>Glyma08g29470.1 
          Length = 396

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 2  GLLGKSF-TSKFRSITTLAISRIAILMNQHKARASHARSDVAQFLNLGYQDRALLRVKLQ 60
           LLG++F  +KF++I  LAISR+A+L NQ +AR   ARSD+ + L +G+ +RA LRV+  
Sbjct: 7  ALLGRTFKAAKFKAIVNLAISRLAVLKNQRQARLRQARSDILELLQIGHLERASLRVEHV 66

Query: 61 PFSSNNNLFFLRINSEFQKLLKEVY 85
              N    ++RI      L++ V+
Sbjct: 67 MKDQNMLDVYVRIEGYCNLLIERVH 91