Miyakogusa Predicted Gene

Lj1g3v3328680.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3328680.1 tr|F2EA50|F2EA50_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,46.91,3e-19,coiled-coil,NULL,CUFF.30418.1
         (182 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g53500.1                                                       228   3e-60
Glyma08g47960.1                                                       218   3e-57
Glyma08g47960.2                                                       216   7e-57
Glyma08g26370.1                                                        75   3e-14

>Glyma18g53500.1 
          Length = 175

 Score =  228 bits (581), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 120/179 (67%), Positives = 143/179 (79%), Gaps = 4/179 (2%)

Query: 4   FFRSSLRSFATTAKSAHHNNHRDNHKFLPPTSFLGSWEAPKDPKEAEAKLAQLRRDYAKQ 63
            FRSS R     A SA  + H +NH+FL   SFLGSWEAP+DPKEAEAKLA+LRR+YAKQ
Sbjct: 1   MFRSSFR----RAFSARASKHCENHEFLSRNSFLGSWEAPRDPKEAEAKLARLRREYAKQ 56

Query: 64  VKELRKEYIEEMELMRLEKQRKDEARREALRVATEERKRLKAQEAEIRAQQRNIEQQQFR 123
           VKE+RKEYI EME M++EK+RKDEA REALRVA EERK+LKAQ A++RAQ+R+IE+QQFR
Sbjct: 57  VKEVRKEYIREMEAMKIEKERKDEAHREALRVANEERKKLKAQAAQLRAQERDIERQQFR 116

Query: 124 ETLLKERAEKLEYWRRKVKMHEEKKAEKNELLRRQSSMWVDEAEIEKQIFDTVIATTHF 182
           ETLLKERAEKLE WR KVKM E KKAEK E LRRQSS W++E  +EK++ + +    H 
Sbjct: 117 ETLLKERAEKLENWRMKVKMLEGKKAEKKEFLRRQSSAWIEEGNLEKKVVEAMAEIMHL 175


>Glyma08g47960.1 
          Length = 190

 Score =  218 bits (554), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 120/181 (66%), Positives = 148/181 (81%), Gaps = 3/181 (1%)

Query: 3   TFFRSSLR-SFATTAKSAHHNNHRDNHKFLPPTSFLGSWEAPKDPKEAEAKLAQLRRDYA 61
           + FRS LR  F+TT  SA    H +NH+FL   SFLGSW+AP+DPKEAEAKL +LRR+YA
Sbjct: 12  SMFRSLLRRPFSTT--SARALKHCENHEFLSKNSFLGSWDAPRDPKEAEAKLTRLRREYA 69

Query: 62  KQVKELRKEYIEEMELMRLEKQRKDEARREALRVATEERKRLKAQEAEIRAQQRNIEQQQ 121
            QVKE+RKEYI EME+M++EK+RKDEARREALRVA EERK+LKAQ A++RAQ+R+IE+QQ
Sbjct: 70  LQVKEVRKEYIREMEVMKIEKERKDEARREALRVANEERKKLKAQAAQLRAQERDIERQQ 129

Query: 122 FRETLLKERAEKLEYWRRKVKMHEEKKAEKNELLRRQSSMWVDEAEIEKQIFDTVIATTH 181
           FRETLLKERAEKLE W+ KVKMHEEKKAEK E L RQSS W++E  +EK++ + ++   H
Sbjct: 130 FRETLLKERAEKLENWKMKVKMHEEKKAEKKEFLHRQSSAWIEEGNLEKKVVEAMVEIMH 189

Query: 182 F 182
            
Sbjct: 190 L 190


>Glyma08g47960.2 
          Length = 178

 Score =  216 bits (551), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 120/180 (66%), Positives = 147/180 (81%), Gaps = 3/180 (1%)

Query: 4   FFRSSLR-SFATTAKSAHHNNHRDNHKFLPPTSFLGSWEAPKDPKEAEAKLAQLRRDYAK 62
            FRS LR  F+TT  SA    H +NH+FL   SFLGSW+AP+DPKEAEAKL +LRR+YA 
Sbjct: 1   MFRSLLRRPFSTT--SARALKHCENHEFLSKNSFLGSWDAPRDPKEAEAKLTRLRREYAL 58

Query: 63  QVKELRKEYIEEMELMRLEKQRKDEARREALRVATEERKRLKAQEAEIRAQQRNIEQQQF 122
           QVKE+RKEYI EME+M++EK+RKDEARREALRVA EERK+LKAQ A++RAQ+R+IE+QQF
Sbjct: 59  QVKEVRKEYIREMEVMKIEKERKDEARREALRVANEERKKLKAQAAQLRAQERDIERQQF 118

Query: 123 RETLLKERAEKLEYWRRKVKMHEEKKAEKNELLRRQSSMWVDEAEIEKQIFDTVIATTHF 182
           RETLLKERAEKLE W+ KVKMHEEKKAEK E L RQSS W++E  +EK++ + ++   H 
Sbjct: 119 RETLLKERAEKLENWKMKVKMHEEKKAEKKEFLHRQSSAWIEEGNLEKKVVEAMVEIMHL 178


>Glyma08g26370.1 
          Length = 70

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 58/70 (82%)

Query: 48  EAEAKLAQLRRDYAKQVKELRKEYIEEMELMRLEKQRKDEARREALRVATEERKRLKAQE 107
           EAE KLAQL+R++A+QVK  RKEYI EME++++EK+ K + RRE LRVA EE K+L+AQ 
Sbjct: 1   EAETKLAQLQREHAEQVKGFRKEYIREMEVVKIEKECKAKNRREVLRVANEEHKKLEAQA 60

Query: 108 AEIRAQQRNI 117
           +++RAQ+ ++
Sbjct: 61  SQLRAQEHDL 70