Miyakogusa Predicted Gene
- Lj1g3v3289940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3289940.1 tr|B9NC75|B9NC75_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_747167 PE=4
SV=1,37.87,6e-19,seg,NULL; WAK_assoc,NULL,gene.g34336.t1.1
(186 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g53190.1 120 7e-28
Glyma02g09750.1 75 6e-14
Glyma18g53220.1 74 1e-13
Glyma18g53210.1 74 1e-13
Glyma08g04900.1 57 1e-08
Glyma09g31320.1 57 1e-08
Glyma05g34780.1 54 9e-08
Glyma07g10510.1 54 1e-07
Glyma07g10700.1 54 1e-07
Glyma09g31390.1 49 2e-06
Glyma18g53180.1 47 9e-06
>Glyma18g53190.1
Length = 261
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 106/185 (57%), Gaps = 16/185 (8%)
Query: 1 MNLNDVRYKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYD 60
+N+ND RYKVLE PD +LR+TR DYL+ +C FV TSLD +L+V +S Y+NLTLFY
Sbjct: 81 ININDFRYKVLEVNPDNHTLRITREDYLEGICQPKFVTTSLDTELYVHDSAYKNLTLFY- 139
Query: 61 CV--VPNAVPF--PCVPNSGSGQHVYAQLGSFDFTSMFCK-QSXXXXXXXXXXDITDVNK 115
C +P+ F CVPN G +VY + + + ++ D +D +K
Sbjct: 140 CANDLPSTTGFLPSCVPN---GNYVYPRFEPLPPPNYYASCKTVVVPVPPSLVDTSDADK 196
Query: 116 TLSAIRNGFVVNWIAGIQECEECR-KAGGVCGYDSIRP--TCYCRERDQTCPEELPSSDD 172
+AI +GFVV WI GI ECE+C AG VCG P TCYC RD C LP DD
Sbjct: 197 IHNAIIDGFVVRWIVGIGECEKCMISAGRVCGGIEWYPNQTCYC--RDGPCSNFLP--DD 252
Query: 173 QSYKS 177
++ +S
Sbjct: 253 KAPQS 257
>Glyma02g09750.1
Length = 682
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 3 LNDVRYKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYDCV 62
++ V Y+V+ + +L + R+D E C +++VN++ D F S QNLTLFY+C
Sbjct: 80 ISSVSYRVIHVNSEAHTLNLARLDLWNETCTNVYVNSTFDGPTFSYGSGNQNLTLFYECE 139
Query: 63 VPNAVP------FPCVPNSGSGQHVYAQLGSFDFTSMF----CKQSXXXXXXXXXXDITD 112
+ + F C N G + Y+ +G F + C + D
Sbjct: 140 ASSRITETPENLFHCWSN-GDKNNSYSLVGPFPLDPILEVVECDEHVKVPILIELADRLV 198
Query: 113 VNKTL--SAIRNGFVVNWIAGIQ-ECEECRKAGGVCGYDS--IRPTCYCRERDQTC 163
N++L + GF VN++ + EC EC +GGVCG+DS P C C DQ C
Sbjct: 199 KNRSLLGEVLMKGFNVNYMNPYETECFECLASGGVCGFDSDNDEPICIC--GDQLC 252
>Glyma18g53220.1
Length = 695
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 14/176 (7%)
Query: 1 MNLNDVRYKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYD 60
+N++ V Y+V++ ++ +L + R+D E C ++VN++ D +F S QNLTLFY+
Sbjct: 74 LNISSVSYRVIDIDSEDHTLTLARLDLWNETCTDVYVNSTFDGPVFSYGSGNQNLTLFYE 133
Query: 61 CVVPNAVP------FPCVPNSGSGQHVYAQLGSFDFTSMF----CKQSXXXXXXXXXXDI 110
C + + F C N G + Y+ +G F + C + D
Sbjct: 134 CKPTSRIIETPENLFNCWSN-GDKNNSYSLVGPFPLDPILEVVECDEHVKVPILKVQADR 192
Query: 111 TDVNKTL--SAIRNGFVVNWIAGIQ-ECEECRKAGGVCGYDSIRPTCYCRERDQTC 163
N++L + GF VN++ + EC EC +GGVCG+DS C D C
Sbjct: 193 LVENRSLLGEVLMKGFNVNYMNPYESECFECLDSGGVCGFDSDNDEHICICGDHLC 248
>Glyma18g53210.1
Length = 210
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 8 YKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYDC-----V 62
Y+VLE + +++ R DY CP+ N ++ F S +NLTL+YDC +
Sbjct: 28 YRVLEVNDSDHRIKLVRTDYWNNTCPTSLRNFTIGCTFFDYGSDSRNLTLYYDCSSPSFL 87
Query: 63 VPNAVP--FPCVPNSGSGQHVYAQLG-------SFDFTSMF--CKQSXXXXXXXXXXDIT 111
P++ P F C N + + S + + CK ++
Sbjct: 88 QPDSFPPKFNCSVNGTQMNNYFVDESMLANAETSVSISEILGACKSRVVVPILESEAEVL 147
Query: 112 DVNKTL----SAIRNGFVVNWIAGIQECEECRKAGGVCGYDSIRP--TCYCR 157
+ N T+ +A+ NGF V W A C+EC+ +GG CGYD I C+CR
Sbjct: 148 ETNSTVENLKAALENGFGVEWEANNSLCDECQNSGGHCGYDPISSEFACHCR 199
>Glyma08g04900.1
Length = 618
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 69/165 (41%), Gaps = 23/165 (13%)
Query: 7 RYKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYDC----- 61
R+ VL +LR+ R D + + C S F NTSL F QN+ +FY+C
Sbjct: 102 RFNVLNINQTASTLRMVRTDLVYDRCSSNFTNTSLSVSPFTFLPSVQNVIVFYECPSGIN 161
Query: 62 -VVPNAVPFPCVPNSGSGQHVY-----AQLGSFDFTSMFCKQSXXXXXXXXXXDITDVNK 115
VV N F C + + +HV+ QL F +C S
Sbjct: 162 SVVGNT--FTC--QNDTSKHVFYVVNGTQLNQFPDLHKYCGVSLQVQVSQGVV----WES 213
Query: 116 TLSAIRNGFVVNWIAGI-QECEECRKAGGVCGY---DSIRPTCYC 156
L + GF V + A + +C CR +GG CG DS + +CYC
Sbjct: 214 GLGVLEKGFDVRYDAELSSQCTACRDSGGTCGTNENDSPQFSCYC 258
>Glyma09g31320.1
Length = 300
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 21/188 (11%)
Query: 1 MNLNDVRYKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYD 60
+++ R+ V++ K L++ R+D + C + + N LD F S + TL YD
Sbjct: 78 IDMMSQRFHVIDIDQTSKVLKMARLDLWDDPCTNEYSNVKLDSDFFNYTSNDDDYTLLYD 137
Query: 61 CVVP----------NAVPFPCVPNSGSGQHVYAQLGSF-DFTSMFCKQSXXXXXXXXXXD 109
C P + F C +SG + + + CK S
Sbjct: 138 CGPPVTYTSSVNIKGTISFSCPIDSGFRDAFFVSSTDVGNLKDLGCKHSINVSVLREA-- 195
Query: 110 ITDVNKTLSAIRNGFVVNWIAGIQE--CEECRKAGGVCGYDSIRP--TCYC---RERDQT 162
+ D + + + GF V WI G+ E C+ C K+GG CG++ + TC C + D+
Sbjct: 196 VKDALQVENVLEKGFEVGWI-GVDEGQCDGCIKSGGRCGHNVSKDAFTCLCPNQQSYDEV 254
Query: 163 CPEELPSS 170
C + SS
Sbjct: 255 CSKSQTSS 262
>Glyma05g34780.1
Length = 631
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 63/148 (42%), Gaps = 16/148 (10%)
Query: 7 RYKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYDC----- 61
R+ VL +LR+ R D + + C S F NTSL F S QN+T+FY+C
Sbjct: 103 RFNVLNINQTASTLRMARTDLVYDRCSSNFTNTSLSVSPFSFPSTVQNVTIFYECPSGIN 162
Query: 62 -VVPNAVPFPCVPNSGSGQHVYAQLGS-FDFTSMFCKQSXXXXXXXXXXDITDVNKTLSA 119
VV N F C +S + Y G+ M Q I + K A
Sbjct: 163 SVVGN--NFTCQNDSNNKHAFYVVNGTQLKHVQM---QVSEGVVWDSEGGIGALEK---A 214
Query: 120 IRNGFVVNWIAGI-QECEECRKAGGVCG 146
+ GF V + A + +C CR +GG CG
Sbjct: 215 LEKGFDVRYDAELSSQCTACRDSGGACG 242
>Glyma07g10510.1
Length = 258
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 70/183 (38%), Gaps = 23/183 (12%)
Query: 7 RYKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYDCVVP-- 64
R+ V+E K L++ R+D + C + + LD F S TL YDC P
Sbjct: 55 RFHVIEIDQTYKVLKIARLDLWIDPCTDEYSDVKLDSDFFNYTSNDDEYTLLYDCGRPVL 114
Query: 65 --------NAVPFPCVPNSGSGQHVYAQLGS--FDFTSMFCKQSXXXXXXXXXXDITDVN 114
+PF C P G + + L + + CK + D
Sbjct: 115 NTSRVNIEGTIPFTC-PIGGGFPNAFCLLSKDVGNLKGLGCKNRINVSVLREA--MKDAL 171
Query: 115 KTLSAIRNGFVVNWIAGIQE--CEECRKAGGVCGYDSIRPTCYC-----RERDQTCPEEL 167
+ GF V W +G+ E C+ C K+GG CG++ + C + D+ C + L
Sbjct: 172 LVQKVLEGGFEVGW-SGVDEDRCDGCIKSGGRCGHNESKDAFMCLCLNQQSSDEVCSKSL 230
Query: 168 PSS 170
S
Sbjct: 231 ARS 233
>Glyma07g10700.1
Length = 254
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 70/183 (38%), Gaps = 23/183 (12%)
Query: 7 RYKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYDCVVP-- 64
R+ V+E K L++ R+D + C + + LD F S TL YDC P
Sbjct: 51 RFHVIEIDQTYKVLKIARLDLWIDPCTDEYSDVKLDSDFFNYTSNDDEYTLLYDCGRPVL 110
Query: 65 --------NAVPFPCVPNSGSGQHVYAQLGS--FDFTSMFCKQSXXXXXXXXXXDITDVN 114
+PF C P G + + L + + CK + D
Sbjct: 111 NTSRVNIEGTIPFTC-PIGGGFPNAFCLLSKDVGNLKGLGCKNRINVSVLREA--MKDAL 167
Query: 115 KTLSAIRNGFVVNWIAGIQE--CEECRKAGGVCGYDSIRPTCYC-----RERDQTCPEEL 167
+ GF V W +G+ E C+ C K+GG CG++ + C + D+ C + L
Sbjct: 168 LVQKVLEGGFEVGW-SGVDEDRCDGCIKSGGRCGHNESKDAFMCLCLNQQSSDEVCSKSL 226
Query: 168 PSS 170
S
Sbjct: 227 ARS 229
>Glyma09g31390.1
Length = 243
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 26/150 (17%)
Query: 1 MNLNDVRYKVLEAKPDEKSLRVTRVDYLQELCPSIFVNTSLDPKLFVLESQYQNLTLFYD 60
+++ R+ V++ K L++ R+D + C + N LD F S + TL YD
Sbjct: 44 IDMMSQRFHVIDIDQTSKVLKMARLDLWDDPCTDEYSNVKLDSDFFNYNSNDDDYTLLYD 103
Query: 61 CVVPNAVPFPCVPNSGSGQHVYAQLGSFDFTSMFCKQSXXXXXXXXXXDITDVNKTLSAI 120
C P + + LG CK S + D + + +
Sbjct: 104 CGPPVT-------------YTSSDLG--------CKHSINVSVLREA--VKDALQVENVL 140
Query: 121 RNGFVVNWIAGIQE--CEECRKAGGVCGYD 148
GF V WI G+ E C+ C K+GG CG++
Sbjct: 141 EKGFEVGWI-GVDEGQCDGCIKSGGRCGHN 169
>Glyma18g53180.1
Length = 593
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 24/182 (13%)
Query: 1 MNLNDVRYKVLEAKPDEKSLRVTRVDYL-QELCPSIFVNTSLDPKLFVLE-SQYQNLTLF 58
+ +N ++Y+VL + + L+V R +Y +C + N++ D F + N+TLF
Sbjct: 31 ITINFIKYRVLGWENTSQILKVARDNYWDNNVCVNGDRNSTFDNTPFQYDYDGLVNVTLF 90
Query: 59 YDCVVPNAVP------------FPCVPNSGSGQHVYAQLGSFDFTSMFCKQSXXXXXXXX 106
YDC ++ P FPC G VY + S +
Sbjct: 91 YDCPASSSPPTISSLPASSVLTFPC------GGAVYYTVQPL--PSSYESPCNIVVIPIF 142
Query: 107 XXDITDVNKTLSAIRNGFVVNWIAGIQECEECRKAGGVCGYDSIRPTCYCRE--RDQTCP 164
+ ++ + A++ GF + W +CE+C +GG CG C+C++ +C
Sbjct: 143 NDSLYTPDRIIEALQGGFQIEWTGNYDKCEKCTGSGGECGSVDGNFQCFCKDGPHSASCK 202
Query: 165 EE 166
E+
Sbjct: 203 EK 204