Miyakogusa Predicted Gene

Lj1g3v3278870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3278870.1 Non Chatacterized Hit- tr|I1HFL5|I1HFL5_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,71.7,0.000000000000005,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; LISH,LisH dimerisation motif,CUFF.30296.1
         (58 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g09790.1                                                       117   2e-27
Glyma05g09170.1                                                       112   1e-25
Glyma19g00740.1                                                        50   6e-07

>Glyma02g09790.1 
          Length = 1160

 Score =  117 bits (294), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 54/57 (94%), Positives = 57/57 (100%)

Query: 1  MDVERSSLCNCVVNFLLEENYVLTAFELLHELLDDGRDDQAIRLKQYFSDPSLFPPD 57
          MDVERSSLCNCVVNFLLEENY+LTAFELLHELLDDGRDDQAIRLKQ+FSDP+LFPPD
Sbjct: 1  MDVERSSLCNCVVNFLLEENYLLTAFELLHELLDDGRDDQAIRLKQFFSDPNLFPPD 57


>Glyma05g09170.1 
          Length = 1176

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 51/58 (87%), Positives = 56/58 (96%)

Query: 1  MDVERSSLCNCVVNFLLEENYVLTAFELLHELLDDGRDDQAIRLKQYFSDPSLFPPDQ 58
          M+VERSSLCNCVVNFLLEENY+LTAFELLHELLDDGR DQAIRL+QYFSDP+ FPP+Q
Sbjct: 1  MEVERSSLCNCVVNFLLEENYLLTAFELLHELLDDGRHDQAIRLQQYFSDPARFPPNQ 58


>Glyma19g00740.1 
          Length = 223

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 30/51 (58%), Gaps = 18/51 (35%)

Query: 1  MDVERSSLCNCVVNFLLEENYVLTAFELLHELLDDGRDDQAIRLKQYFSDP 51
          M+VERSS CNCV                  ELLDDGR DQAIRL++Y SDP
Sbjct: 1  MEVERSSPCNCV------------------ELLDDGRHDQAIRLQEYLSDP 33