Miyakogusa Predicted Gene

Lj1g3v3255670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3255670.1 tr|B9GLX4|B9GLX4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_547790 PE=4 SV=1,47.06,2e-18,
,CUFF.30267.1
         (154 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g26110.1                                                       154   4e-38
Glyma15g36790.1                                                       139   1e-33
Glyma04g16720.1                                                       139   1e-33
Glyma11g25860.1                                                       124   3e-29
Glyma11g21580.3                                                        62   2e-10
Glyma11g21580.2                                                        62   2e-10
Glyma11g21580.1                                                        62   2e-10
Glyma08g19150.1                                                        62   3e-10
Glyma15g05850.1                                                        61   4e-10
Glyma05g24590.1                                                        59   2e-09
Glyma04g26800.2                                                        57   1e-08
Glyma15g37980.1                                                        53   1e-07
Glyma15g37980.2                                                        53   1e-07
Glyma13g26930.1                                                        47   9e-06

>Glyma13g26110.1 
          Length = 347

 Score =  154 bits (389), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 92/166 (55%), Positives = 103/166 (62%), Gaps = 27/166 (16%)

Query: 1   MHEESSVEESALQDLESIISQFTEKTRIGFRDALYRLARSTKQQHVREDLDGDLNMQQAM 60
           M E+ S+EE  LQ  E +I+QFTEKTRI FRDALYRLAR+TKQ HV EDLDGDLNM Q M
Sbjct: 183 MVEQLSLEEFTLQGFEMLIAQFTEKTRICFRDALYRLARNTKQ-HVVEDLDGDLNMHQEM 241

Query: 61  ARVVQNETRRFKDKKPMESETNSVDRAVANLMFRKMEINALETPDN-------------- 106
              V N+T R +D KPMESETNS+DRAVANLMF KMEIN ++ P                
Sbjct: 242 PDSVYNDTMRSEDSKPMESETNSIDRAVANLMFNKMEINIIDLPLTTLVNLKKEVIGSKG 301

Query: 107 -QGKCSKALNDAPKSHYPQ-----------RFGQMDQQTTTESDFA 140
            QGK SKAL+   KSH P            RF   DQQ  TES  A
Sbjct: 302 LQGKSSKALDVTKKSHSPHAEKLPADAEVPRFEPEDQQEATESYIA 347


>Glyma15g36790.1 
          Length = 314

 Score =  139 bits (350), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/104 (69%), Positives = 81/104 (77%), Gaps = 1/104 (0%)

Query: 1   MHEESSVEESALQDLESIISQFTEKTRIGFRDALYRLARSTKQQHVREDLDGDLNMQQAM 60
           M E+ S+EE  LQ  E +I+QFTEKTRI FRDALYRLAR+TKQ HV EDLDG LNM Q M
Sbjct: 183 MLEQLSLEEYTLQAFEMLIAQFTEKTRISFRDALYRLARNTKQ-HVIEDLDGGLNMHQEM 241

Query: 61  ARVVQNETRRFKDKKPMESETNSVDRAVANLMFRKMEINALETP 104
              V +ET R +D KPMESE+NSVDRAVANLMF KMEIN L+ P
Sbjct: 242 PDSVYHETMRSEDNKPMESESNSVDRAVANLMFNKMEINILDLP 285


>Glyma04g16720.1 
          Length = 220

 Score =  139 bits (350), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/178 (46%), Positives = 104/178 (58%), Gaps = 27/178 (15%)

Query: 3   EESSVEESALQDLESIISQFTEKTRIGFRDALYRLARSTKQQHVREDLDGDLNMQQAMAR 62
           + SS+EE  L+DLE +I QFTE+TRI FRDALYRLAR+T++QHV  D + DLN+Q+A+  
Sbjct: 42  QSSSLEEFILKDLEMVIGQFTERTRICFRDALYRLARNTEEQHVMLDQNEDLNIQKAIPH 101

Query: 63  VVQNETRRFKDKKPMESETNSVDRAVANLMFRKMEINALETPDN---------------- 106
              NET R +DKKPMES TN++DR +ANLMF+ ME N   +P                  
Sbjct: 102 TDHNETMRSQDKKPMESATNNIDRIIANLMFKSMEFNIHHSPITSSTNSIQQVIESNNGL 161

Query: 107 QGKCSKALNDAPKSHY--PQ---------RFGQMDQQTTTESDFANADPIKKSFMLEF 153
            G  SKA+N   K  Y  PQ         RFG  +Q   T S+     PIK SFM+ F
Sbjct: 162 HGNSSKAMNMEEKFCYSHPQKLLVDAEIPRFGLSNQPRDTGSNITCEGPIKTSFMIGF 219


>Glyma11g25860.1 
          Length = 268

 Score =  124 bits (312), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 70/142 (49%), Positives = 91/142 (64%), Gaps = 18/142 (12%)

Query: 3   EESSVEESALQDLESIISQFTEKTRIGFRDALYRLARSTKQQHVREDLDGDLNMQQAMAR 62
           + SS+EE  L+DLE +I QFTE+TRI FRDALYRLAR+T++Q V  D + DLN+Q+A+  
Sbjct: 104 QSSSLEEFILKDLEMVIGQFTERTRICFRDALYRLARNTEEQPVMLDQNEDLNIQKAIPH 163

Query: 63  VVQNETRRFKDKKPMESETNSVDRAVANLMFRKMEINALETP----------------DN 106
              NET R +DKKPMESETN++DR +ANLMF+ ME N   +P                  
Sbjct: 164 TDHNETMRSQDKKPMESETNNIDRIIANLMFKSMEFNIHHSPITSSTNSVQQVIGSNNGP 223

Query: 107 QGKCSKALNDAPKSHY--PQRF 126
           +G  SKA+N   KS Y  PQ+ 
Sbjct: 224 RGNNSKAMNMEDKSCYSHPQKL 245


>Glyma11g21580.3 
          Length = 637

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 15/134 (11%)

Query: 7   VEESALQDLESIISQFTEKTRIGFRDALYRLARSTKQQHVREDLDGDLNMQ----QAMAR 62
           VE++ L  L+ IIS+   K R+  RD+L+RLA+S  Q+H   D            +  AR
Sbjct: 457 VEDTVLYGLQHIISKLDIKIRLCIRDSLFRLAQSATQRHYASDTSSTNKSSREELEVAAR 516

Query: 63  VVQNETRRFKDKKPMESETNSVDRAVANLMF-RKMEI-----NALETP-DNQGKC-SKAL 114
              N   R+     +E+ETN +DR VA+L+F R ME+     + LE+P   + +C SKA 
Sbjct: 517 EESNSQNRYARMPDVETETNPIDRTVAHLLFHRPMELTQNYSDKLESPISTKVQCESKAA 576

Query: 115 NDAPKSHYPQRFGQ 128
           N     ++P  + Q
Sbjct: 577 NPV---NFPMSYSQ 587


>Glyma11g21580.2 
          Length = 637

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 15/134 (11%)

Query: 7   VEESALQDLESIISQFTEKTRIGFRDALYRLARSTKQQHVREDLDGDLNMQ----QAMAR 62
           VE++ L  L+ IIS+   K R+  RD+L+RLA+S  Q+H   D            +  AR
Sbjct: 457 VEDTVLYGLQHIISKLDIKIRLCIRDSLFRLAQSATQRHYASDTSSTNKSSREELEVAAR 516

Query: 63  VVQNETRRFKDKKPMESETNSVDRAVANLMF-RKMEI-----NALETP-DNQGKC-SKAL 114
              N   R+     +E+ETN +DR VA+L+F R ME+     + LE+P   + +C SKA 
Sbjct: 517 EESNSQNRYARMPDVETETNPIDRTVAHLLFHRPMELTQNYSDKLESPISTKVQCESKAA 576

Query: 115 NDAPKSHYPQRFGQ 128
           N     ++P  + Q
Sbjct: 577 NPV---NFPMSYSQ 587


>Glyma11g21580.1 
          Length = 637

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 15/134 (11%)

Query: 7   VEESALQDLESIISQFTEKTRIGFRDALYRLARSTKQQHVREDLDGDLNMQ----QAMAR 62
           VE++ L  L+ IIS+   K R+  RD+L+RLA+S  Q+H   D            +  AR
Sbjct: 457 VEDTVLYGLQHIISKLDIKIRLCIRDSLFRLAQSATQRHYASDTSSTNKSSREELEVAAR 516

Query: 63  VVQNETRRFKDKKPMESETNSVDRAVANLMF-RKMEI-----NALETP-DNQGKC-SKAL 114
              N   R+     +E+ETN +DR VA+L+F R ME+     + LE+P   + +C SKA 
Sbjct: 517 EESNSQNRYARMPDVETETNPIDRTVAHLLFHRPMELTQNYSDKLESPISTKVQCESKAA 576

Query: 115 NDAPKSHYPQRFGQ 128
           N     ++P  + Q
Sbjct: 577 NPV---NFPMSYSQ 587


>Glyma08g19150.1 
          Length = 589

 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 56/93 (60%)

Query: 3   EESSVEESALQDLESIISQFTEKTRIGFRDALYRLARSTKQQHVREDLDGDLNMQQAMAR 62
           +++S E ++   L+ I+ Q   KT++  RD+LYRLA+S +Q+H   + +G +   +    
Sbjct: 442 DQASPEANSFCHLQQIMDQLDIKTKMCIRDSLYRLAKSAEQRHNNSNANGCIGDDETCKA 501

Query: 63  VVQNETRRFKDKKPMESETNSVDRAVANLMFRK 95
           ++  +  R      ME++TN +DR+VA+L+F +
Sbjct: 502 MMAQDANRCAGLMDMETDTNPIDRSVAHLLFHR 534


>Glyma15g05850.1 
          Length = 432

 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 56/93 (60%)

Query: 3   EESSVEESALQDLESIISQFTEKTRIGFRDALYRLARSTKQQHVREDLDGDLNMQQAMAR 62
           +++S+E ++   L+ I+ Q   KT++  RD+LYRLA+S + +H   + +G +   +    
Sbjct: 286 DQASLEATSFCHLQQIMDQLDIKTKMCIRDSLYRLAKSAEHRHNNSNANGCIGDDETCKA 345

Query: 63  VVQNETRRFKDKKPMESETNSVDRAVANLMFRK 95
           ++  +  R      ME++TN +DR+VA+L+F +
Sbjct: 346 MMAQDANRCAGLMDMETDTNPIDRSVAHLLFHR 378


>Glyma05g24590.1 
          Length = 484

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 60/95 (63%), Gaps = 3/95 (3%)

Query: 3   EESSVEESALQDLESIISQFTEKTRIGFRDALYRLARSTKQQHVREDLDGDL--NMQQAM 60
           +E+S+E ++   L+ I+ Q   +T++  RD+LYRLA+S +Q+H   +  G +  +++   
Sbjct: 342 DEASLETTSFCQLQQIMDQLDIRTKLCIRDSLYRLAKSAEQRHNDTNASGQIGDDVEACK 401

Query: 61  ARVVQNETRRFKDKKPMESETNSVDRAVANLMFRK 95
           A ++Q ++ R      +E++TN VDR VA+L+F +
Sbjct: 402 AVMIQ-DSNRCTGFMHIETDTNPVDRTVAHLLFHR 435


>Glyma04g26800.2 
          Length = 666

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 30/147 (20%)

Query: 7   VEESALQDLESIISQFTEKTRIGFRDALYRLAR-------STKQQHVREDLDGDLNMQQA 59
           VE++ L  L+ IIS+   K R+  RD+L+RLA+       S+  +  RE+L       + 
Sbjct: 517 VEDTVLYRLQDIISKLDIKIRLCIRDSLFRLAQRHYTSDTSSTNKSSREEL-------EV 569

Query: 60  MAR---VVQNETRRFKDKKPMESETNSVDRAVANLMF-RKMEI-----NALETPDNQGKC 110
            AR   + QN   R  D   +E+ETN +DR VA+L+F R ME+     + LE+P +  KC
Sbjct: 570 AAREESISQNRYARMPD---VETETNPIDRTVAHLLFHRPMELTQNYSDKLESPIST-KC 625

Query: 111 -SKALN--DAPKSHYPQRFGQMDQQTT 134
            SKA N  + P S  P    + +QQ +
Sbjct: 626 ESKAANPLNFPVSCLPDEDSKNNQQLS 652


>Glyma15g37980.1 
          Length = 767

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 10/108 (9%)

Query: 7   VEESALQDLESIISQFTEKTRIGFRDALYRLARSTKQQHVREDLDGDLNMQ----QAMAR 62
           VE++ L  L+  IS+   K R+  RD+L+RLA+S  Q++   D     N      +  AR
Sbjct: 585 VEDTILYMLQDAISKLDVKIRLCIRDSLFRLAQSAMQRNYANDTSSTNNTSREELKVAAR 644

Query: 63  VVQNETRRFKDKKPMESETNSVDRAVANLMF-RKMEINA-----LETP 104
              N   R+     +E++TN +DR VA+L+F R +E+       LE+P
Sbjct: 645 EESNSQNRYARIADVETKTNPIDRTVAHLLFHRPLELTGNYPDKLESP 692


>Glyma15g37980.2 
          Length = 655

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 10/108 (9%)

Query: 7   VEESALQDLESIISQFTEKTRIGFRDALYRLARSTKQQHVREDLDGDLNMQ----QAMAR 62
           VE++ L  L+  IS+   K R+  RD+L+RLA+S  Q++   D     N      +  AR
Sbjct: 473 VEDTILYMLQDAISKLDVKIRLCIRDSLFRLAQSAMQRNYANDTSSTNNTSREELKVAAR 532

Query: 63  VVQNETRRFKDKKPMESETNSVDRAVANLMF-RKMEINA-----LETP 104
              N   R+     +E++TN +DR VA+L+F R +E+       LE+P
Sbjct: 533 EESNSQNRYARIADVETKTNPIDRTVAHLLFHRPLELTGNYPDKLESP 580


>Glyma13g26930.1 
          Length = 652

 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 10/108 (9%)

Query: 7   VEESALQDLESIISQFTEKTRIGFRDALYRLARSTKQQHVREDLDGDLNMQQAMARVVQN 66
           VE++ L  L+ +IS+     R+  RD+L+RLA+S  Q++   D     N  +   +V   
Sbjct: 470 VEDTILYMLQDVISKLDVNIRLCIRDSLFRLAQSAMQRNYASDTSSTNNSSREELKVAAR 529

Query: 67  ETR----RFKDKKPMESETNSVDRAVANLMF-RKMEINA-----LETP 104
           E R    R+     +E++TN +DR VA+L+F R +++       LE+P
Sbjct: 530 EERSSQNRYARIADVETKTNPIDRTVAHLLFHRPLDLTGNYPDKLESP 577