Miyakogusa Predicted Gene

Lj1g3v3244630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3244630.1 tr|G7KV95|G7KV95_MEDTR DNA ligase OS=Medicago
truncatula GN=MTR_7g082860 PE=4 SV=1,69.82,0,seg,NULL; DNA CROSS-LINK
REPAIR PROTEIN PSO2/SNM1,NULL; DNA CROSS-LINK REPAIR PROTEIN
PSO2/SNM1-RELA,CUFF.30264.1
         (550 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g53010.1                                                       536   e-152
Glyma02g09960.1                                                       462   e-130
Glyma06g06090.1                                                       125   1e-28
Glyma16g05020.2                                                       110   5e-24
Glyma16g05020.1                                                       110   5e-24
Glyma19g28170.1                                                        63   8e-10

>Glyma18g53010.1 
          Length = 486

 Score =  536 bits (1382), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 289/471 (61%), Positives = 330/471 (70%), Gaps = 53/471 (11%)

Query: 84  MEVLRVLGYGESSEFTEDGLETNIHVVGWNVLGETWPYFRPDFVKMKDIMTERG--YSKV 141
           MEVLRVLGYGE+ EFTEDG E+NIHVVGWN+LGETWPYFRP+FV+MK++M ERG  YSKV
Sbjct: 1   MEVLRVLGYGENGEFTEDGKESNIHVVGWNLLGETWPYFRPNFVRMKEVMAERGGSYSKV 60

Query: 142 VGFVPTGWTYEVKRSRFAVKSKDSCQIHLVPYSEHSNYEELREYVKFLKPKQVIPTVGLD 201
           VGFVPTGWTYEVKR+RFAVKSKD  +IHLVPYSEHSNY+ELREYVKFLKPK+V+PTVGLD
Sbjct: 61  VGFVPTGWTYEVKRNRFAVKSKDLFKIHLVPYSEHSNYDELREYVKFLKPKRVVPTVGLD 120

Query: 202 VEKSDSKHANKMRKYFAGLVDETANKQEFLKGFRRG---TSEVGLKGEKDVSDVLEQGQI 258
           VEKSDSKHA+KMRKYFA LVDETANKQ+FL+GF R      E G K EK VSD L  GQ 
Sbjct: 121 VEKSDSKHADKMRKYFARLVDETANKQDFLRGFLRDPGEKGEAGFKAEKVVSDALGPGQD 180

Query: 259 QEKE-------------VKPSDADG------ETCAKDPTLLNDEEKEKIIQELSCCLPSW 299
            E+E             + P  A G      ET A+DPTLLNDEEKEKIIQEL+ CLP+W
Sbjct: 181 MEEEEINALKKTEGDMGIGPVVAVGLSSFMEETYAQDPTLLNDEEKEKIIQELTFCLPTW 240

Query: 300 VTRSQVLDLISISGSNIVEAVSNFYERETEFHDQVNXXXXXXXXXXXXXXXXXXXLPKSC 359
           VTR+Q+LDLISISGSN++EAVSNFYERETEFH+QV                    L K C
Sbjct: 241 VTRNQLLDLISISGSNVIEAVSNFYERETEFHEQVISCQTPVSTSKCCSLNGMDSLAKPC 300

Query: 360 LNTNSTPLSVDIFPSQDSKLTKLRNTVPSRISPAKRXXXXXXXXXXXXXXXXXXX-XXXX 418
           LNTN+T  ++DIFP            +PS ISPAKR                        
Sbjct: 301 LNTNNTGKNIDIFP------------MPSPISPAKRKRSTDSKQNKKAKVKAKSEPSGSK 348

Query: 419 QSTITRFFGKVTPEVPGGTHSDHAGSKLDESPKVEELLQSDVEKLYKDEIDQFMQIINGN 478
           Q+TITRFF KV PE+PG                VE+LL +D  ++YKDEIDQFMQIING 
Sbjct: 349 QATITRFFSKVIPEMPG----------------VEDLLPTDDGQMYKDEIDQFMQIINGT 392

Query: 479 ESLKRDAITIIKKAKGDVNKALDIYYCNSGHLGENEISAQEECKIDRPLEK 529
           ESLK+ AITII+K KGD+NKALDIYY NS +LGE +IS Q E KIDRP+ K
Sbjct: 393 ESLKKYAITIIEKTKGDINKALDIYYGNSENLGEKQISVQVESKIDRPVVK 443


>Glyma02g09960.1 
          Length = 724

 Score =  462 bits (1188), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 277/539 (51%), Positives = 327/539 (60%), Gaps = 112/539 (20%)

Query: 1   MLAEPALAPFVGADAVFLDTTYCHPKFVFPAQEESVDYVVNVVGECDG---DDVLFLVAT 57
           M++EPALAPFVG DA+             P   ESV+       +C+    D VLFLVAT
Sbjct: 124 MVSEPALAPFVGVDAISSSPNKRSLLITLPTDVESVE------CKCENNSNDKVLFLVAT 177

Query: 58  YVVGKERILLELARRFNKKVLVDARKMEVLRVLGYGESSEFTEDGLETNIHVVGWNVLGE 117
           YV+GKE+IL +LARRF +K+ VDARKMEVLRVLGYGE+ EF +D  E+NIHVVGWNVLGE
Sbjct: 178 YVIGKEKILPKLARRFKRKIHVDARKMEVLRVLGYGENGEFIKDEKESNIHVVGWNVLGE 237

Query: 118 TWPYFRPDFVKMKDIMTERGYSKVVGFVPTGWTYEVKRSRFAVKSKDSCQIHLVPYSEHS 177
           TWPYFRP+F         R   +VV FVPT WTYEVKR++FAVKSKDS QI+L       
Sbjct: 238 TWPYFRPNF--------RRVIFQVVSFVPTQWTYEVKRNKFAVKSKDSFQINL------- 282

Query: 178 NYEELREYVKFLKPKQVIPTVGL-DVEKSDSKHANKMRKYFAGLVDETANKQEFLKGFR- 235
                                G+ DVEKSDSKHA+KMRKYF  LVDETANKQ+FL+GF  
Sbjct: 283 ---------------------GVCDVEKSDSKHADKMRKYFTWLVDETANKQDFLRGFHC 321

Query: 236 ----RGTSEVGLKGEKDVSDVLEQGQIQEKEVKPSDADGETCAKDPTLLNDEEKEKIIQE 291
               +G  EVG K EK VSD  E GQ  +KE+                            
Sbjct: 322 VPCEKG--EVGFKAEKVVSDAREPGQDMDKEL---------------------------- 351

Query: 292 LSCCLPSWVTRSQVLDLISISGSNIVEAVSNFYERETEFHDQVNXXXXXXXXXXXXXXXX 351
                         LDLISISGSN+VEAVSNFY+RETEFH+Q                  
Sbjct: 352 --------------LDLISISGSNVVEAVSNFYKRETEFHEQ-------------GCSLN 384

Query: 352 XXXLPKSCLNTNSTPLSVDIFPSQDSKLTKLRNTVPSRISPAKRXXXXXXXXXXXXXXXX 411
              L K CLNTN+T  +++IF SQDSKL  LR+TVPS ISPAKR                
Sbjct: 385 TDSLAKPCLNTNNTGKNINIFSSQDSKLNNLRHTVPSPISPAKRKRSSDSKQKKKKPKVK 444

Query: 412 XXX--XXXXQSTITRFFGKVTPEVPGGTHSDHAGSKLDESPKVEELLQSDVEKLYKDEID 469
                    Q+TITRFF K+ PE+PGG HS ++  KLD+S KVE+LL +D  +LYKDEID
Sbjct: 445 ARSEPSGSKQATITRFFSKLIPEMPGGAHSYNSEPKLDQSSKVEDLLPTDDRQLYKDEID 504

Query: 470 QFMQIINGNESLKRDAITIIKKAKGDVNKALDIYYCNSGHLGENEISAQEECKIDRPLE 528
           QFMQIINGNESLK+ AITII+K KGD+NKALDIYY NS +LGEN+IS   E KIDRP++
Sbjct: 505 QFMQIINGNESLKKYAITIIEKTKGDINKALDIYYGNSEYLGENKISV--ESKIDRPVK 561


>Glyma06g06090.1 
          Length = 641

 Score =  125 bits (313), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 113/203 (55%), Gaps = 17/203 (8%)

Query: 14  DAVFLDTTYCHPKFVFPAQEESVDYVVNVV-GECDGDDVLFLVATYVVGKERILLELARR 72
           + + LDTTYC+P++ FP QE  + +V++ V  E      LFL+ +Y +GKER+ LE+AR 
Sbjct: 440 NTLILDTTYCNPQYDFPKQESVIQFVIDAVQAETFNPKTLFLIGSYTIGKERLFLEVARS 499

Query: 73  FNKKVLVDARKMEVLRVLGYGESSE--FTEDGLETNIHVVGWNVLGETWPYFRPDFVKMK 130
             KKV V A K+ +L+ L   E     FT +  E+NIHV     L          F ++K
Sbjct: 500 LRKKVHVTAAKLRILKCLELKEEDMQWFTSNEHESNIHVAPMWTLAS--------FKRLK 551

Query: 131 DIMTE--RGYSKVVGFVPTGWTYEVKRSRFAVKSKDSCQI---HLVPYSEHSNYEELREY 185
            I ++    Y+ +V F PTGWT+   + +   +      I   + VPYSEHS++ EL+E+
Sbjct: 552 HISSQYKSQYNLIVAFSPTGWTFGKGKKKSTGRRWQQGTIIRWYEVPYSEHSSFTELKEF 611

Query: 186 VKFLKPKQVIPTVGLD-VEKSDS 207
           V+ + P  +IP+V  D  E SD+
Sbjct: 612 VRVVSPDNIIPSVNNDGPESSDA 634


>Glyma16g05020.2 
          Length = 505

 Score =  110 bits (274), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 117/211 (55%), Gaps = 18/211 (8%)

Query: 14  DAVFLDTTYCHPKFVFPAQEESVDYVVNVVGEC--DGDDVLFLVATYVVGKERILLELAR 71
           + ++LDTTYC+PK+ FP++EE ++YVV +           L +V  Y +GKE + L +++
Sbjct: 300 NVLYLDTTYCNPKYRFPSKEEVLNYVVKITKNHLKIHPRTLVVVGAYSIGKECVYLAISK 359

Query: 72  RFNKKVLVDARKMEVLRVLGYGE-SSEFTEDGLETNIHVVGWNVLGETWPYFRPDFVKMK 130
               K+  +A +  +L+  G+ + S +   +G  T +HV+  + L       R + +K  
Sbjct: 360 ALGVKIYANASRRRILQAFGWPDLSDKLCTNGNNTLLHVLPMSSL-------RVETLKDY 412

Query: 131 DIMTERGYSKVVGFVPTGWTYEVKRSR----FAVKSKDSCQIHLVPYSEHSNYEELREYV 186
               +  ++ ++ F PTGWT+  K S         SK +  I+ VPYSEHS++ EL+++V
Sbjct: 413 LKTYKEQFTAILAFRPTGWTFSEKISNDLELIKPVSKGNITIYGVPYSEHSSFSELQDFV 472

Query: 187 KFLKPKQVIPTVGLDVEKSDSKHANKMRKYF 217
           + L+P ++IPTV +     ++ +  KM+ YF
Sbjct: 473 QVLRPDKIIPTVNV----GNAANREKMQSYF 499


>Glyma16g05020.1 
          Length = 505

 Score =  110 bits (274), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 117/211 (55%), Gaps = 18/211 (8%)

Query: 14  DAVFLDTTYCHPKFVFPAQEESVDYVVNVVGEC--DGDDVLFLVATYVVGKERILLELAR 71
           + ++LDTTYC+PK+ FP++EE ++YVV +           L +V  Y +GKE + L +++
Sbjct: 300 NVLYLDTTYCNPKYRFPSKEEVLNYVVKITKNHLKIHPRTLVVVGAYSIGKECVYLAISK 359

Query: 72  RFNKKVLVDARKMEVLRVLGYGE-SSEFTEDGLETNIHVVGWNVLGETWPYFRPDFVKMK 130
               K+  +A +  +L+  G+ + S +   +G  T +HV+  + L       R + +K  
Sbjct: 360 ALGVKIYANASRRRILQAFGWPDLSDKLCTNGNNTLLHVLPMSSL-------RVETLKDY 412

Query: 131 DIMTERGYSKVVGFVPTGWTYEVKRSR----FAVKSKDSCQIHLVPYSEHSNYEELREYV 186
               +  ++ ++ F PTGWT+  K S         SK +  I+ VPYSEHS++ EL+++V
Sbjct: 413 LKTYKEQFTAILAFRPTGWTFSEKISNDLELIKPVSKGNITIYGVPYSEHSSFSELQDFV 472

Query: 187 KFLKPKQVIPTVGLDVEKSDSKHANKMRKYF 217
           + L+P ++IPTV +     ++ +  KM+ YF
Sbjct: 473 QVLRPDKIIPTVNV----GNAANREKMQSYF 499


>Glyma19g28170.1 
          Length = 91

 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 8/83 (9%)

Query: 138 YSKVVGFVPTGWTYEVKRSR----FAVKSKDSCQIHLVPYSEHSNYEELREYVKFLKPKQ 193
           ++ ++ F PTGWT+  + S         SK +  I+ VPYSEHS++ ELR++V+FLKP +
Sbjct: 9   FTAILAFRPTGWTFSERISNDLELIKPVSKRNITIYGVPYSEHSSFTELRDFVQFLKPDK 68

Query: 194 VIPTVGLDVEKSDSKHANKMRKY 216
           +IPTV +     ++ +  KM+ Y
Sbjct: 69  IIPTVNV----WNAANREKMQSY 87