Miyakogusa Predicted Gene

Lj1g3v3244510.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3244510.2 Non Chatacterized Hit- tr|G7KVA4|G7KVA4_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,60.2,0.000000000000005, ,CUFF.30254.2
         (134 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g10040.1                                                       223   4e-59
Glyma18g52910.1                                                        84   5e-17
Glyma05g23820.1                                                        67   6e-12
Glyma12g01940.1                                                        57   4e-09

>Glyma02g10040.1 
          Length = 134

 Score =  223 bits (569), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 107/134 (79%), Positives = 115/134 (85%)

Query: 1   MALSFCNNHLLHLNKIPFALQSQRTPSSNTTYTSLLQFPSIRCCSTLNQKNSINLNTCKN 60
           MAL F ++ LLH NK+  ALQSQR  SS    T    +PSIRCCS+LNQKNSINL TCKN
Sbjct: 1   MALFFSHHPLLHGNKLLLALQSQRITSSKPNNTCAFTYPSIRCCSSLNQKNSINLKTCKN 60

Query: 61  CKTQFDPALNHPRACRFHTAHYGGETKRKFESVYEGGTMNTPDSGKVLQYWHCCGSEDPF 120
           CKTQFDP+LNHP ACRFHT+H+GGETKRKFESVYEGGTMNTPDSGKV QYWHCCGSEDPF
Sbjct: 61  CKTQFDPSLNHPHACRFHTSHFGGETKRKFESVYEGGTMNTPDSGKVFQYWHCCGSEDPF 120

Query: 121 DPGCTASPHSSYDD 134
           DPGCTASPHSSYDD
Sbjct: 121 DPGCTASPHSSYDD 134


>Glyma18g52910.1 
          Length = 103

 Score = 83.6 bits (205), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/63 (69%), Positives = 48/63 (76%), Gaps = 2/63 (3%)

Query: 33 TSLLQFPSIRCCSTLNQKNS-INLNTCKNCKTQFDPALNHPRACRFHTAHYGGETKRKFE 91
          T    +PSIRCCS+LNQK+S INL TCKNCKTQFDPALNHP ACRFHTA + G T   F 
Sbjct: 4  TCTFTYPSIRCCSSLNQKSSSINLKTCKNCKTQFDPALNHPLACRFHTARF-GVTPTSFL 62

Query: 92 SVY 94
          S Y
Sbjct: 63 SSY 65


>Glyma05g23820.1 
          Length = 92

 Score = 67.0 bits (162), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 30/34 (88%)

Query: 51 NSINLNTCKNCKTQFDPALNHPRACRFHTAHYGG 84
          NSINL TCKNCKTQFDPALNHP ACRFHT H+G 
Sbjct: 51 NSINLKTCKNCKTQFDPALNHPLACRFHTTHFGS 84


>Glyma12g01940.1 
          Length = 92

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 3/81 (3%)

Query: 54  NLNTCKNCKTQFDPALNHPRACRFHTAHYGGETKRKFESVYEGGTMNTPDSGKVLQYWHC 113
           N   CK CK  +DP+ N   +CRFHT+ +        +  YE G  + P + K   ++ C
Sbjct: 14  NSKVCKRCKQNYDPSSNTSTSCRFHTSFFVCRRHDDQKRYYELGPDDPPYAAK---FYDC 70

Query: 114 CGSEDPFDPGCTASPHSSYDD 134
           CG+EDP   GCT + H SYD+
Sbjct: 71  CGAEDPEASGCTTNFHVSYDE 91