Miyakogusa Predicted Gene

Lj1g3v3219210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3219210.1 Non Chatacterized Hit- tr|B4FWV4|B4FWV4_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,33.95,2e-16,seg,NULL;
PROKAR_LIPOPROTEIN,NULL; coiled-coil,NULL,CUFF.30226.1
         (269 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g52620.1                                                       345   3e-95
Glyma02g10300.1                                                       286   1e-77
Glyma15g04440.1                                                       145   5e-35
Glyma04g13640.1                                                        56   4e-08

>Glyma18g52620.1 
          Length = 283

 Score =  345 bits (884), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 183/284 (64%), Positives = 202/284 (71%), Gaps = 16/284 (5%)

Query: 1   MKXXXXXXXXXXIVFGCXXXXXXXXXXXXXWWKKRIINREIENDYGSPVKELFNMFCWKR 60
           MK          I+FGC             WWKKRI NREIEN+YG+PVKELF MFCWKR
Sbjct: 1   MKSLSSVGLGLSIIFGCLLLALVAEVYYLLWWKKRITNREIENNYGNPVKELFYMFCWKR 60

Query: 61  PSSSSLRQNGFTPRELCSSVRIGENLVYNPELQAQSQTNKGFLFKPFGEDGLEEEYMRQQ 120
           PSSSSLRQ  FTP ELCSS+RIG+ LV+NPE Q QSQ+ K F+FKPFGEDG++ EYM QQ
Sbjct: 61  PSSSSLRQTSFTPPELCSSMRIGDTLVHNPE-QVQSQSGKDFVFKPFGEDGMDAEYMSQQ 119

Query: 121 GLFGPPRFLFPIIEESKEDLESQDSK---------SRGRSLGDLLVVETPYLXXXXXXXX 171
            L GPPRFLF I+EESKEDLES D K         SRGRSLGDLLVVETPY+        
Sbjct: 120 DLLGPPRFLFTIVEESKEDLESDDGKFKCDKSGKGSRGRSLGDLLVVETPYMTPTTSPPF 179

Query: 172 XXXXXXXXXX-XXQHGFNPLFESATDAEFNRMKSSPPPKFKFLQEAEEKLRRKLQ--DNE 228
                        Q GFNPLFE+ATDAEFNR+KSSPPPKFKFLQEAEEKLRRKLQ  +N+
Sbjct: 180 FTPPFTTPISPYNQRGFNPLFETATDAEFNRLKSSPPPKFKFLQEAEEKLRRKLQQDENK 239

Query: 229 GNGDEVS---ITVVVDKKSERDVNHQSHLPQYHSSTSQVLPLGS 269
           GNGDEV    IT+VVDKK+ER+VNHQ   PQYHS TSQVLPL S
Sbjct: 240 GNGDEVDGSFITIVVDKKTEREVNHQPRPPQYHSGTSQVLPLAS 283


>Glyma02g10300.1 
          Length = 231

 Score =  286 bits (733), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 156/232 (67%), Positives = 173/232 (74%), Gaps = 18/232 (7%)

Query: 55  MFCWKRPSSSSLRQNGFTPRELCSSVRIGENLVYNPELQAQSQTNKGFLFKPFGEDGLEE 114
           MFCWKRPSSSSLRQ  FTP E CSS+RIG+ LV++PE Q QSQ+ K F+FKPFGEDG + 
Sbjct: 1   MFCWKRPSSSSLRQTSFTPPEFCSSMRIGDTLVHDPE-QVQSQSGKEFVFKPFGEDGTDA 59

Query: 115 EYMRQQGLF--GPPRFLFPIIEESKEDLESQDSKS---------RGRSLGDLLVVETPYL 163
           EYMRQQ L   GPPRFLF I+EESKEDLES D KS         RGRSLGDLLVVETPY+
Sbjct: 60  EYMRQQDLLLLGPPRFLFTIVEESKEDLESDDGKSKCDKSGKGSRGRSLGDLLVVETPYM 119

Query: 164 XXXXXXXXXXXXXXXXXX-XXQHGFNPLFESATDAEFNRMKSSPPPKFKFLQEAEEKLRR 222
                                Q GFNPLFE+ATDAEFN++KSSPPPKFKFLQEAEEKLRR
Sbjct: 120 TPTTSPPFFTPPFTTPISPYNQRGFNPLFETATDAEFNKLKSSPPPKFKFLQEAEEKLRR 179

Query: 223 KLQ--DNEGNGDEVS---ITVVVDKKSERDVNHQSHLPQYHSSTSQVLPLGS 269
           KLQ  +N+GNGDEV    IT+VVDKK+ER+VNHQ   PQYHSSTSQVLPL S
Sbjct: 180 KLQEDENKGNGDEVDGSFITIVVDKKTEREVNHQPRPPQYHSSTSQVLPLAS 231


>Glyma15g04440.1 
          Length = 300

 Score =  145 bits (366), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/289 (38%), Positives = 142/289 (49%), Gaps = 47/289 (16%)

Query: 13  IVFGCXXXXXXXXXXXXXWWKKRIINREIENDYGSPVKELFNMFCWKRPSSSSLRQN--- 69
           +VFGC             WWKKR    +IE D     K  F   CWK P +  +  N   
Sbjct: 12  LVFGCLLLALCAQLYYFLWWKKRRTQMDIEMD----AKGAFYWGCWKTPCAMHVANNTGR 67

Query: 70  GFTPRELCSSVRIGENLVYNPELQAQSQTNKGFLFKPFGEDG-LEEEYMRQQGLFGPPRF 128
           G   R++  +    E     PE++         L KPFGE+G +E E MR   L GPPRF
Sbjct: 68  GGVNRDIERTTTSRE-----PEMELD------LLHKPFGEEGTVESELMRLHNLAGPPRF 116

Query: 129 LFPIIEESKEDLESQDSK---SRGRSLGDL-LVVETPYLXXXXXXXXXXXXXXXX--XXX 182
           LFPI EE+KEDLES+D     SR RSL DL L ++TP+L                     
Sbjct: 117 LFPIKEETKEDLESEDRSRKGSRTRSLSDLMLTIDTPFLTPVASSPLKCCSLPLDPLHSY 176

Query: 183 XQHGFNPLFESATDAEFNRMKSSPPPKFKFLQEAEEKLRRKLQD-------NEGNGDEVS 235
              GFNPLFES+ + E+NR +SSPPPKFKF+++AEEKL RKL +       +  N  E  
Sbjct: 177 KHQGFNPLFESSVELEYNRFRSSPPPKFKFMRDAEEKLHRKLMEEARRKAVDNNNVQECG 236

Query: 236 I------TVVVD------KKSERDVNH---QSHLPQYHSSTSQVLPLGS 269
           +      T+  D       K  +   H   Q +LPQ+ S +SQ+LPL S
Sbjct: 237 VKDCSNETLATDFRDGSFLKFIQTTEHKQPQQYLPQFPSGSSQILPLAS 285


>Glyma04g13640.1 
          Length = 254

 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 15/100 (15%)

Query: 157 VVETPYLXXXXXXXXXXXX-XXXXXXXXQHGFNPLFESATDAEFNRMKSSPPPKFKFLQE 215
           VVETPY+                     Q GFNPLFE++TDAEFNR+KSSPPP  +    
Sbjct: 132 VVETPYMTPTTSPLFFTPQFTTPISPYNQCGFNPLFETSTDAEFNRLKSSPPPNIQ---- 187

Query: 216 AEEKLRRKLQDNEGNGDEVS-ITVVVDKKSERDVNHQSHL 254
                     +++GNGDEV    + ++   + D   + H+
Sbjct: 188 ---------DESKGNGDEVDGCFITINTNFKYDYMDKQHM 218