Miyakogusa Predicted Gene

Lj1g3v3194690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3194690.1 Non Chatacterized Hit- tr|I1KCU9|I1KCU9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40917
PE,42.5,0.000000000003, ,gene.g34257.t1.1
         (139 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g21060.1                                                        76   1e-14

>Glyma06g21060.1 
          Length = 764

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 61/120 (50%), Gaps = 36/120 (30%)

Query: 15  AGQLAFVYEGEADVSQIPQ--------------------TPKFIRDDIDTESYWISVFEM 54
            GQ    Y+GE DVSQI                      TPK + DD  TE  W      
Sbjct: 591 TGQFVAGYKGEDDVSQITHWLANIISDGDSRDLPFFTLRTPKLVPDD--TEPIW------ 642

Query: 55  IHNFFADSPMSVRLKSLKQSILG---ELSVYREDPRIAPALLLGALFSFSTIWLRRSQRV 111
                + S  ++ L++LKQS+LG    LS YREDPR+ P LLLGAL S  TIWLRRSQ+V
Sbjct: 643 -----SMSAQNIPLQNLKQSVLGVLSGLSAYREDPRVGPFLLLGALISLGTIWLRRSQQV 697