Miyakogusa Predicted Gene

Lj1g3v3182300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3182300.1 Non Chatacterized Hit- tr|I1LYQ8|I1LYQ8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45965
PE,53.91,0.0000000000003,seg,NULL; coiled-coil,NULL,CUFF.30160.1
         (202 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g19060.1                                                        60   2e-09

>Glyma13g19060.1 
          Length = 634

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 71/149 (47%), Gaps = 46/149 (30%)

Query: 24  KKKGRKDIEVMDGNVADSEEVHVFDEKQQSKMKKRKNYDDVLPTGIREVGSSKRSKKGKM 83
           KKKGRKD EVM+ NVAD +EV   D+ Q+SKMKKRK  DD    GI+E+  SK SK  KM
Sbjct: 6   KKKGRKD-EVMNINVADDKEVQFLDDNQESKMKKRKK-DDSSLNGIQELVFSKPSK--KM 61

Query: 84  TEDGELKNSEGGHRTXXXXXXXXXXXXXXXXXXXXXXXHNEYDGFKSNEGGDDDQGXXXX 143
            +D  L                                       KSN+G DDDQG    
Sbjct: 62  MKDNRL---------------------------------------KSNKGKDDDQG---K 79

Query: 144 XXXXXXLSEESQQNECDRFKSNEGEDDDQ 172
                 LS E+Q  + + FKSNE +DD Q
Sbjct: 80  LMMKKKLSAENQHVDHNEFKSNEDKDDGQ 108