Miyakogusa Predicted Gene
- Lj1g3v3170080.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3170080.1 Non Chatacterized Hit- tr|I3SB83|I3SB83_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.49,0,seg,NULL;
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H,NULL; EUKARYOTIC
TRANSLATION INITIATI,CUFF.30143.1
(333 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g10760.1 638 0.0
Glyma18g52060.1 632 0.0
Glyma18g22830.1 143 2e-34
Glyma20g17030.1 123 3e-28
Glyma20g18880.1 107 2e-23
Glyma15g41720.1 97 2e-20
Glyma17g36230.1 54 3e-07
Glyma14g08940.2 54 3e-07
Glyma13g29660.1 54 3e-07
Glyma14g08940.1 54 3e-07
Glyma15g09410.1 54 3e-07
>Glyma02g10760.1
Length = 339
Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/335 (92%), Positives = 316/335 (94%), Gaps = 2/335 (0%)
Query: 1 MATTT--ARSFLQVAATEEVAPPLRVVQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGS 58
MATTT ARSFLQVAATEE APPLRVVQ+EGLVILKIIKHCKDHSPSLVTGQLLGLDVGS
Sbjct: 1 MATTTTPARSFLQVAATEEAAPPLRVVQIEGLVILKIIKHCKDHSPSLVTGQLLGLDVGS 60
Query: 59 VLEVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVEL 118
VLEVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVEL
Sbjct: 61 VLEVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVEL 120
Query: 119 IETFMNYQENIRRCVCIVYDPSRSDQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLS 178
IETFMNYQENIRRCVCI+YDPSRSDQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLS
Sbjct: 121 IETFMNYQENIRRCVCIIYDPSRSDQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLS 180
Query: 179 WVDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYDRLQLSTSSLLERNTEYLIECMDD 238
WVDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYDRLQLSTSSL+ERNTE+LIECMDD
Sbjct: 181 WVDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYDRLQLSTSSLMERNTEFLIECMDD 240
Query: 239 LSLEQQKFQFHYXXXXXXXXXXXXXXXKRRTENMARKAAGEEPLPEEDPSNPIFKPLPEP 298
LSLEQQKFQF+Y KRR ENMARKAAGEEPLPEEDPSNPIFKPLPEP
Sbjct: 241 LSLEQQKFQFYYRSLSRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPSNPIFKPLPEP 300
Query: 299 SRLESFLITNQISNYCNQINGVSGQSFNRLYLMKA 333
SRLESFLITNQISNYCNQINGVSGQSFNRLYLMKA
Sbjct: 301 SRLESFLITNQISNYCNQINGVSGQSFNRLYLMKA 335
>Glyma18g52060.1
Length = 337
Score = 632 bits (1629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/333 (91%), Positives = 314/333 (94%)
Query: 1 MATTTARSFLQVAATEEVAPPLRVVQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGSVL 60
MAT+ ARSFLQVAATEE APPLRVVQ+EGLVILKIIKHCKDHSPSLVTGQLLGLDVGSVL
Sbjct: 1 MATSPARSFLQVAATEEAAPPLRVVQIEGLVILKIIKHCKDHSPSLVTGQLLGLDVGSVL 60
Query: 61 EVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIE 120
EVTNCFPFP+REEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIE
Sbjct: 61 EVTNCFPFPVREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIE 120
Query: 121 TFMNYQENIRRCVCIVYDPSRSDQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWV 180
TFMNYQENIRRCVCI+YDPSRSDQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSDQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWV 180
Query: 181 DIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYDRLQLSTSSLLERNTEYLIECMDDLS 240
DIFEEIP+KVSNSALISAFMTELEPDTPVTQ DYDRLQLSTSSL+ERNTE+LIECMDDLS
Sbjct: 181 DIFEEIPVKVSNSALISAFMTELEPDTPVTQGDYDRLQLSTSSLMERNTEFLIECMDDLS 240
Query: 241 LEQQKFQFHYXXXXXXXXXXXXXXXKRRTENMARKAAGEEPLPEEDPSNPIFKPLPEPSR 300
LEQQK QF+Y KRRTENMARKAAGEEPLPEEDPSNPIFKPLPEPSR
Sbjct: 241 LEQQKVQFYYRSLSRQQAQQQAWLQKRRTENMARKAAGEEPLPEEDPSNPIFKPLPEPSR 300
Query: 301 LESFLITNQISNYCNQINGVSGQSFNRLYLMKA 333
LESFLITNQISNYCNQINGVSGQSFNRLYLMKA
Sbjct: 301 LESFLITNQISNYCNQINGVSGQSFNRLYLMKA 333
>Glyma18g22830.1
Length = 90
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/93 (80%), Positives = 79/93 (84%), Gaps = 7/93 (7%)
Query: 145 GVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWVDIFEEIPIK----VSNSALISAFM 200
GVLALKALKLSD FMELY SNNFTGEKLREKNLSWVDIFEEIP + SNSALISAFM
Sbjct: 1 GVLALKALKLSDYFMELYCSNNFTGEKLREKNLSWVDIFEEIPARFPKIFSNSALISAFM 60
Query: 201 TELEPDTPVTQCDYDRLQLSTSSLLERNTEYLI 233
TEL+PDTP CDYD LQLSTSSL+ERNT + I
Sbjct: 61 TELKPDTP---CDYDHLQLSTSSLMERNTNFFI 90
>Glyma20g17030.1
Length = 234
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 91/168 (54%), Gaps = 42/168 (25%)
Query: 82 ANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTV----ELIETFMNYQENIRRCVCIVY 137
A Y+L MM ++ N + + L F + L++T+ +QENIRRCVCI+Y
Sbjct: 3 AYYKLLMM----ISDISNRKISLLDAVLCALFLSNLVNDHLLQTWQCFQENIRRCVCIIY 58
Query: 138 DPSRSDQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWVDIFEEIPIKVSNSALIS 197
DPSRSDQ + N F L SNSA IS
Sbjct: 59 DPSRSDQEIW-----------------NIFVSRLLS-----------------SNSAFIS 84
Query: 198 AFMTELEPDTPVTQCDYDRLQLSTSSLLERNTEYLIECMDDLSLEQQK 245
A MTELEPDT V QCDYD LQLSTSSL+ERNT + I+CMDDLSLEQQK
Sbjct: 85 ALMTELEPDTLVNQCDYDHLQLSTSSLMERNTIFFIQCMDDLSLEQQK 132
>Glyma20g18880.1
Length = 174
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 83/158 (52%), Gaps = 17/158 (10%)
Query: 52 LGLDVGSVLEVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLG 111
G G L + +C +P A GA L + C+R + LG
Sbjct: 6 FGTRFGFFLVLESCGEWP---GTNLFVAMGALATLTFLPCIRT-----------RFMRLG 51
Query: 112 SFQTVELIETFMNYQENIR---RCVCIVYDPSRSDQGVLALKALKLSDSFMELYRSNNFT 168
+ T ++ M + + VCI+YDPSR DQGVLALK LKLSDSFMELYR+NNFT
Sbjct: 52 AATTTRILRLLMFLVKKKKLPLEAVCIIYDPSRPDQGVLALKDLKLSDSFMELYRNNNFT 111
Query: 169 GEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEPD 206
EKLREKNLSWV IFEEIP S L +++ P
Sbjct: 112 REKLREKNLSWVGIFEEIPTSFSKICLSLKMVSKFCPH 149
>Glyma15g41720.1
Length = 62
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/49 (93%), Positives = 46/49 (93%)
Query: 268 RTENMARKAAGEEPLPEEDPSNPIFKPLPEPSRLESFLITNQISNYCNQ 316
R ENMARK AGEEPL EEDPSNPIFKPLPEPSRLESFLITNQISNYCNQ
Sbjct: 11 RAENMARKVAGEEPLSEEDPSNPIFKPLPEPSRLESFLITNQISNYCNQ 59
>Glyma17g36230.1
Length = 312
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 25 VQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGS-VLEVTNCFPFPMREEDEEIEADGAN 83
V + L +LK++KH + P V G +LG V + V + F P +EA
Sbjct: 34 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHV 93
Query: 84 YQLEMMRCLREVNVDNNTVGWYQST-LLGSFQTVELIETFMNYQENIRRCVCIVYDPSRS 142
+Q M+ L++ VGWY S G + + I T +++ +R V +V DP +S
Sbjct: 94 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQS 153
Query: 143 DQGVLALKALKL 154
+G + + A +L
Sbjct: 154 VKGKVVIDAFRL 165
>Glyma14g08940.2
Length = 312
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 25 VQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGS-VLEVTNCFPFPMREEDEEIEADGAN 83
V + L +LK++KH + P V G +LG V + V + F P +EA
Sbjct: 34 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHV 93
Query: 84 YQLEMMRCLREVNVDNNTVGWYQST-LLGSFQTVELIETFMNYQENIRRCVCIVYDPSRS 142
+Q M+ L++ VGWY S G + + I T +++ +R V +V DP +S
Sbjct: 94 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQS 153
Query: 143 DQGVLALKALKL 154
+G + + A +L
Sbjct: 154 VKGKVVIDAFRL 165
>Glyma13g29660.1
Length = 309
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 25 VQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGS-VLEVTNCFPFPMREEDEEIEADGAN 83
V + L +LK++KH + P V G +LG V + V + F P +EA
Sbjct: 31 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHV 90
Query: 84 YQLEMMRCLREVNVDNNTVGWYQST-LLGSFQTVELIETFMNYQENIRRCVCIVYDPSRS 142
+Q M+ L++ VGWY S G + + I T +++ +R V +V DP +S
Sbjct: 91 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQS 150
Query: 143 DQGVLALKALKL 154
+G + + A +L
Sbjct: 151 VKGKVVIDAFRL 162
>Glyma14g08940.1
Length = 316
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 25 VQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGS-VLEVTNCFPFPMREEDEEIEADGAN 83
V + L +LK++KH + P V G +LG V + V + F P +EA
Sbjct: 34 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHV 93
Query: 84 YQLEMMRCLREVNVDNNTVGWYQST-LLGSFQTVELIETFMNYQENIRRCVCIVYDPSRS 142
+Q M+ L++ VGWY S G + + I T +++ +R V +V DP +S
Sbjct: 94 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQS 153
Query: 143 DQGVLALKALKL 154
+G + + A +L
Sbjct: 154 VKGKVVIDAFRL 165
>Glyma15g09410.1
Length = 309
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 25 VQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGS-VLEVTNCFPFPMREEDEEIEADGAN 83
V + L +LK++KH + P V G +LG V + V + F P +EA
Sbjct: 31 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHV 90
Query: 84 YQLEMMRCLREVNVDNNTVGWYQST-LLGSFQTVELIETFMNYQENIRRCVCIVYDPSRS 142
+Q M+ L++ VGWY S G + + I T +++ +R V +V DP +S
Sbjct: 91 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQS 150
Query: 143 DQGVLALKALKL 154
+G + + A +L
Sbjct: 151 VKGKVVIDAFRL 162