Miyakogusa Predicted Gene

Lj1g3v3150030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3150030.1 Non Chatacterized Hit- tr|C5X8F5|C5X8F5_SORBI
Putative uncharacterized protein Sb02g032890 OS=Sorghu,61.9,8e-19,no
description,Beta-grasp domain; seg,NULL; MoaD/ThiS,Molybdopterin
synthase/thiamin biosynthesis su,CUFF.30135.1
         (73 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g08690.1                                                       115   1e-26
Glyma03g02070.1                                                       114   3e-26

>Glyma07g08690.1 
          Length = 99

 Score =  115 bits (287), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 56/59 (94%)

Query: 15 CDSKKIHNVNVEQQNGEDKLTMKGLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCD 73
          CDSKKIHNVN+EQ NGEDKL MK LLSWV+TNLIKERPEMFMKGDTVRPGVLVLVNDCD
Sbjct: 15 CDSKKIHNVNIEQHNGEDKLIMKDLLSWVQTNLIKERPEMFMKGDTVRPGVLVLVNDCD 73


>Glyma03g02070.1 
          Length = 90

 Score =  114 bits (284), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 53/59 (89%), Positives = 56/59 (94%)

Query: 15 CDSKKIHNVNVEQQNGEDKLTMKGLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCD 73
          CDSKKIHNVN+EQ NGEDKL MK LL+WVRTNLIKERPEMFMKG+TVRPGVLVLVNDCD
Sbjct: 7  CDSKKIHNVNIEQHNGEDKLIMKDLLAWVRTNLIKERPEMFMKGNTVRPGVLVLVNDCD 65