Miyakogusa Predicted Gene

Lj1g3v3138970.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3138970.1 Non Chatacterized Hit- tr|I1P6A0|I1P6A0_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,55.81,1e-18,seg,NULL; RING FINGER PROTEIN,NULL,CUFF.30126.1
         (419 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g31610.1                                                        72   8e-13
Glyma10g30510.1                                                        71   2e-12
Glyma18g51870.1                                                        69   7e-12
Glyma10g03780.1                                                        68   2e-11
Glyma19g34440.1                                                        68   2e-11
Glyma20g36830.1                                                        67   5e-11
Glyma08g28970.1                                                        66   9e-11
Glyma02g15980.1                                                        64   2e-10
Glyma10g32360.1                                                        61   2e-09
Glyma20g35250.1                                                        59   9e-09

>Glyma03g31610.1 
          Length = 413

 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 55/105 (52%), Gaps = 4/105 (3%)

Query: 315 IWFMLQASQNQSKEPFLPQIPKNYLRIKDGRMTVRXXXXXXXXXXXXXXXXXIEITCRGQ 374
           IWF L AS+NQ  +  LPQIP +YLRIKDG ++V                  +EI C GQ
Sbjct: 305 IWFSLVASENQEGDAPLPQIPASYLRIKDGSISVSFIQKYLMKKLDLTSETEVEIKCMGQ 364

Query: 375 QLLPFLTLQHVRDNIWTQRDTT---RPLLSDSSTTDHVMVLHYGR 416
            +LP L L ++ + +W    +T    P    SS  D VMVL YGR
Sbjct: 365 PVLPTLQLYNLVE-LWLDMASTPQRIPATIGSSAKDFVMVLAYGR 408


>Glyma10g30510.1 
          Length = 432

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 310 RPHSGIWFMLQASQNQSKEPFLPQIPKNYLRIKDGRMTVRXXXXXXXXXXXXXXXXXIEI 369
           R +S IWF L AS++Q  +  LPQI   YLRIKDG + V                  +EI
Sbjct: 319 RKNSPIWFSLVASEDQKGDVPLPQISACYLRIKDGAVPVSFIQKYLVKKLNLACEAEVEI 378

Query: 370 TCRGQQLLPFLTLQHVRDNIWTQRDTTR---PLLSDSSTTDHVMVLHYGR 416
            CRGQ +LP L L ++ D +W +  +T    P    SS  D VMVL Y R
Sbjct: 379 MCRGQPVLPSLQLHNLVD-LWFRTASTSKKIPASVGSSAKDFVMVLSYCR 427


>Glyma18g51870.1 
          Length = 196

 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 35/44 (79%), Positives = 37/44 (84%), Gaps = 5/44 (11%)

Query: 287 GFDQLDVA---GPSSD--ITVRVVDPPKRPHSGIWFMLQASQNQ 325
           GFDQ DVA   GPSSD  +TVRVVDPP+RPHSGIWFMLQAS NQ
Sbjct: 153 GFDQYDVAAGPGPSSDNNVTVRVVDPPRRPHSGIWFMLQASPNQ 196


>Glyma10g03780.1 
          Length = 429

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 4/108 (3%)

Query: 312 HSGIWFMLQASQNQSKEPFLPQIPKNYLRIKDGRMTVRXXXXXXXXXXXXXXXXXIEITC 371
           +  IWF L AS+NQ  +  LPQIP NY+RIK+G + V                  +EI C
Sbjct: 318 NDSIWFSLAASENQEGDAPLPQIPSNYVRIKNGSIPVSFIQKLLMKKLGLNSEDEVEIKC 377

Query: 372 RGQQLLPFLTLQHVRDNIWTQRDTT---RPLLSDSSTTDHVMVLHYGR 416
            G  +LP L +Q++ D+ W     +    P    SS  D VM+L YGR
Sbjct: 378 MGHPVLPSLQVQNLVDS-WLDMAASGHRIPATIGSSGKDFVMILTYGR 424


>Glyma19g34440.1 
          Length = 428

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 52/105 (49%), Gaps = 4/105 (3%)

Query: 315 IWFMLQASQNQSKEPFLPQIPKNYLRIKDGRMTVRXXXXXXXXXXXXXXXXXIEITCRGQ 374
           IWF L AS+NQ  +  LPQIP +YLRIKDG + V                  +EI C GQ
Sbjct: 320 IWFSLVASENQEGDDPLPQIPASYLRIKDGSVPVSFIQKYLMKKLDLTSETEVEIKCVGQ 379

Query: 375 QLLPFLTLQHVRDNIWTQRDTTR---PLLSDSSTTDHVMVLHYGR 416
            +LP L L ++ + +W     T    P    SS  D VMVL Y R
Sbjct: 380 PVLPTLQLYNLVE-LWLDTAPTSQRIPATIGSSAKDFVMVLAYAR 423


>Glyma20g36830.1 
          Length = 372

 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query: 310 RPHSGIWFMLQASQNQSKEPFLPQIPKNYLRIKDGRMTVRXXXXXXXXXXXXXXXXXIEI 369
           R +S IWF L AS++Q  +  LPQI   YLRIKDG + V                  +EI
Sbjct: 259 RKNSPIWFSLVASEDQKGDFPLPQISACYLRIKDGTVPVSFIQKYLMKKLNLASEAEVEI 318

Query: 370 TCRGQQLLPFLTLQHVRDNIWTQRDTTR---PLLSDSSTTDHVMVLHYGR 416
            C GQ +LP L L ++ D +W +  +T    P    SS  D VMVL Y R
Sbjct: 319 MCGGQPVLPSLQLHNLVD-LWFRTASTSKKIPASVGSSAKDFVMVLSYCR 367


>Glyma08g28970.1 
          Length = 195

 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/44 (75%), Positives = 35/44 (79%), Gaps = 5/44 (11%)

Query: 287 GFDQLDVA----GPSSD-ITVRVVDPPKRPHSGIWFMLQASQNQ 325
           GFDQ DVA    GPSSD +TVRVVDPP+RPHSGIWFML  S NQ
Sbjct: 152 GFDQYDVAAAGAGPSSDNVTVRVVDPPRRPHSGIWFMLLVSPNQ 195


>Glyma02g15980.1 
          Length = 428

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 54/110 (49%), Gaps = 7/110 (6%)

Query: 312 HSGIWFMLQASQNQSKEPFLPQIPKNYLRIKDGRMTVRXXXXXXXXXXXXXXXXXIEITC 371
           +  IWF L AS+NQ  +  LPQIP NY+RIK+G + V                  +EI C
Sbjct: 316 NDSIWFSLAASENQEGDAPLPQIPSNYVRIKNGSIPVSFIQKLLMKKLGLKSEDEVEIKC 375

Query: 372 RGQQLLPFLTLQHVRDNIWTQRDTTR-----PLLSDSSTTDHVMVLHYGR 416
            G  +LP L +Q++ D +W   DT            SS  D VM+L YGR
Sbjct: 376 MGHPVLPSLQVQNLVD-LWGV-DTASLGHRISATIGSSGKDFVMILTYGR 423


>Glyma10g32360.1 
          Length = 428

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 3/107 (2%)

Query: 315 IWFMLQASQNQSKEPFLPQIPKNYLRIKDGRMTVRXXXXXXXXXXXXXXXXXIEITCRGQ 374
           IWF L A++ +     LPQ+  +YLR+KDG +TV                  +EIT +G+
Sbjct: 320 IWFCLVAAEEKKASARLPQLSSSYLRVKDGSVTVSYIKKYLVKKLGLGSEAEVEITLQGR 379

Query: 375 QLLPFLTLQHVRDNIWTQRDTTRPLLSD--SSTTDHVMVLHYGRATA 419
            LL  L L+++ D +W Q      + +   SS  D +MVL YGR   
Sbjct: 380 ALLSSLQLRNLVD-MWLQTVPKNGIQASVGSSAKDFIMVLSYGRKAC 425


>Glyma20g35250.1 
          Length = 357

 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 5/107 (4%)

Query: 315 IWFMLQASQNQSKEPFLPQIPKNYLRIKDGRMTVRXXXXXXXXXXXXXXXXXIEITCRGQ 374
           IWF L A++ +     LPQ+  +YLR+KDG +TV                  +EIT +G+
Sbjct: 253 IWFCLVAAEEKKASARLPQLYSSYLRVKDGSVTVSYIKKYLVKKLGLASEDEVEITLQGR 312

Query: 375 QLLPFLTLQHVRDNIWTQ---RDTTRPLLSDSSTTDHVMVLHYGRAT 418
            LL  L L+++ D +W     ++  +  +  SS  D +M L YGR T
Sbjct: 313 ALLSSLQLRNLVD-MWLHTVPKNKIQTFVG-SSAKDFIMALSYGRKT 357