Miyakogusa Predicted Gene

Lj1g3v3137960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3137960.1 Non Chatacterized Hit- tr|B9F7L8|B9F7L8_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,80.36,3e-18,no
description,Sterile alpha motif/pointed domain; STERILE ALPHA MOTIF
(SAM) DOMAIN-CONTAINING PROTE,CUFF.30125.1
         (249 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g28950.1                                                       307   6e-84
Glyma18g51850.1                                                       275   4e-74
Glyma06g17430.1                                                       127   1e-29
Glyma04g37670.1                                                       124   7e-29
Glyma05g38440.1                                                       116   2e-26
Glyma08g01230.1                                                        99   5e-21
Glyma15g10850.1                                                        73   3e-13
Glyma06g24180.1                                                        55   7e-08
Glyma06g06090.1                                                        55   1e-07

>Glyma08g28950.1 
          Length = 263

 Score =  307 bits (787), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 163/215 (75%), Positives = 182/215 (84%), Gaps = 14/215 (6%)

Query: 46  KRQRRPSVRLGEIGDQRATGHGNDSHHTRRPTIPPWSWRIPREPSRAASKARSATNPVNG 105
           KRQRRPSVRLGEIGDQRA+ HG++ H  RRP++PPWSWR P+E SR  SKARS TN  NG
Sbjct: 50  KRQRRPSVRLGEIGDQRASAHGHELH-MRRPSMPPWSWRTPKESSRT-SKARSVTNLTNG 107

Query: 106 GEEFGNSNSRRGKAKRGSTTKRLRSEFA-SRTIDEN--------FDDDH-ASPVHSVEEN 155
           GEEFGNSNSRRGKAKRG  TKRLR+ +A + TIDEN        F+ +H  SPVHSVE+N
Sbjct: 108 GEEFGNSNSRRGKAKRGPATKRLRTNWAPTATIDENGDEEGFRDFEHEHEQSPVHSVEDN 167

Query: 156 GLDCWNVDRSEDHRVRVS--DGVESESRERRKNEGVRSWLFELGLSRYAPMFEIHEVDDE 213
           G+D W+VDR+ED RVRVS  DGVESESRERRK++GVRSWL+ELGLSRYAPMFEIHEVDDE
Sbjct: 168 GVDYWHVDRNEDPRVRVSENDGVESESRERRKSDGVRSWLYELGLSRYAPMFEIHEVDDE 227

Query: 214 LLPMLTLEDLKDMGINAVGSRRKMYTAIQKLQKGF 248
           LLPMLTLEDLKDMGINAVGSRRKMYTAIQKL+K  
Sbjct: 228 LLPMLTLEDLKDMGINAVGSRRKMYTAIQKLRKCL 262


>Glyma18g51850.1 
          Length = 246

 Score =  275 bits (703), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 152/208 (73%), Positives = 168/208 (80%), Gaps = 15/208 (7%)

Query: 46  KRQRRPSVRLGEIGDQRAT-GHGNDSHHTRRPTIPPWSWRIPREPSRAASKARSATNPVN 104
           KRQRRPSVRLGEIGDQRA+  HG+DSH TRRP++PPWSWR P+E SR  SKAR+ TN  N
Sbjct: 50  KRQRRPSVRLGEIGDQRASSAHGHDSH-TRRPSMPPWSWRTPKESSRT-SKARTVTNLAN 107

Query: 105 GGEEFGNSNSRRGKAKRGSTTKRLRSEFASR-TIDENFDDDHASPVHSVEENGLDCWNVD 163
           GGEEFGNSNSRRGKAKRG  TKRLR+ +A R TIDEN D++         E         
Sbjct: 108 GGEEFGNSNSRRGKAKRGPATKRLRTNWAPRATIDENGDEEGFRDFEHEHE--------- 158

Query: 164 RSEDHRVRVS--DGVESESRERRKNEGVRSWLFELGLSRYAPMFEIHEVDDELLPMLTLE 221
           +S D RVRVS  DGVESES+ERRK++GVRSWL+ELGLSRYAPMFEIHEVDDELLPMLTLE
Sbjct: 159 QSPDPRVRVSENDGVESESQERRKSDGVRSWLYELGLSRYAPMFEIHEVDDELLPMLTLE 218

Query: 222 DLKDMGINAVGSRRKMYTAIQKLQKGFP 249
           DLKDMGINAVGSRRKMYTAIQKL+K  P
Sbjct: 219 DLKDMGINAVGSRRKMYTAIQKLRKCLP 246


>Glyma06g17430.1 
          Length = 262

 Score =  127 bits (318), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/248 (42%), Positives = 126/248 (50%), Gaps = 60/248 (24%)

Query: 46  KRQRRPSVRLGEIGDQRATGHGNDSHHTRRPTIPPW--SWRIPREPSRAA-----SKARS 98
           KRQRRPSVRLG+IGDQ       DSH  RR     W  ++  PR  S AA     SK R 
Sbjct: 29  KRQRRPSVRLGDIGDQPY-----DSH-PRRAAAKTWRLAFDHPRHSSSAAAAARPSKIRP 82

Query: 99  ATN--PVNGGEEFGNSNSRRGKA--------------KRGSTTKRLRSEFASRTIDE--- 139
            TN  P     E G +    G                KRG   KR+RS + SR       
Sbjct: 83  LTNLTPAAAVAELGETLESDGNVDSVLIGSWKVKDSKKRGGGAKRIRSNWISRIDGGEDD 142

Query: 140 --------------NFDDDHA-SPVHSVEENGLDCWNVDRSEDHRVRVSDGVESESRERR 184
                         +F  +H+ SP+   EE+     N+   E+  V+          ER 
Sbjct: 143 DDDIIVDEDGYHHRDFSAEHSESPMR--EEHSPIMENLGVDEEREVQ-------HYHERN 193

Query: 185 KN----EGVRSWLFELGLSRYAPMFEIHEVDDELLPMLTLEDLKDMGINAVGSRRKMYTA 240
            N    +GVR WL  LGL RYAP+FEIHEVDDE+LP+LTLEDLKDMGI+AVGSRRKM+ A
Sbjct: 194 GNSGSGDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPLLTLEDLKDMGISAVGSRRKMFCA 253

Query: 241 IQKLQKGF 248
           IQKL KGF
Sbjct: 254 IQKLGKGF 261


>Glyma04g37670.1 
          Length = 254

 Score =  124 bits (312), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/232 (42%), Positives = 121/232 (52%), Gaps = 38/232 (16%)

Query: 46  KRQRRPSVRLGEIGDQRATGHGNDSHHTRRPTIPPWSWRIPREPSRAA---SKARSATNP 102
           KRQRRPSVRLG+IGDQ       DSH  RR     W        + AA   SK R  TN 
Sbjct: 29  KRQRRPSVRLGDIGDQPY-----DSH-PRRAAAKTWRLAFDHPRNSAAVKPSKTRPLTNL 82

Query: 103 VNGGEEFGNSNSRRGK-------------AKRGSTTKRLRSEFASRTID------ENFDD 143
                EFG +    G              +K+   +KR+RS + SR ID      ++ D 
Sbjct: 83  TPAAAEFGETLESDGNVDSVVIGSWKVKDSKKRGGSKRIRSNWISR-IDGGEEDDKDVDV 141

Query: 144 DHASPVHSVEENGLDCWNVDRSEDHRVRVSDGVESE-----SRERRKN----EGVRSWLF 194
                 H  + +     +  R E   +  + GV+ E       ER  N    +GVR WL 
Sbjct: 142 GVVDGYHHRDFSAEHSQSPLREEQSPIMENLGVDEEREVLHYHERNGNSGRGDGVRVWLN 201

Query: 195 ELGLSRYAPMFEIHEVDDELLPMLTLEDLKDMGINAVGSRRKMYTAIQKLQK 246
            LGL RYAP+FEIHEVDDE+LP+LTLEDLKDMGI+AVGSRRKM+ AIQKL K
Sbjct: 202 GLGLGRYAPVFEIHEVDDEVLPLLTLEDLKDMGISAVGSRRKMFCAIQKLGK 253


>Glyma05g38440.1 
          Length = 276

 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/267 (37%), Positives = 124/267 (46%), Gaps = 85/267 (31%)

Query: 46  KRQRRPSVRLGEIGDQRATGHGNDSHHTRRPTIPPWSWRIP-------------REPSRA 92
           KRQRRPSVRLG+IG  +      D H  R P   PW                  ++P + 
Sbjct: 30  KRQRRPSVRLGDIGGDQPY----DPHARRNPK--PWKLAFDSHHHHHHHHRSKDKDPGKP 83

Query: 93  ASKARSATNPVNGGEEFGNSNSR---------------RGKAKRGST-TKRLRSEFASRT 136
            SK R  TN     E     N R               +   KRGS  TKR+RS +  R 
Sbjct: 84  -SKTRPLTNLSEFNETLEPCNDREPGNIDTVAIGSWKVKESKKRGSVATKRVRSNWVLRI 142

Query: 137 IDE----------------------------NFDDDHA-------SPVHSVEENGLDCWN 161
            D                              F+ +++       SP+H    + +    
Sbjct: 143 DDGGGDNGGDEGEGEKYNNGEEDGDDDDGYREFEVENSESPLKEQSPIHRKGNSIM---- 198

Query: 162 VDRSEDHRVRVSDGVESESRERRKNEGVRSWLFELGLSRYAPMFEIHEVDDELLPMLTLE 221
           +  S  HR+ +  GVE         +GVR WL  LGL RYAP+FE+HEVDDE+LPMLTLE
Sbjct: 199 MGLSYLHRL-ILMGVE---------DGVRVWLNGLGLGRYAPVFEVHEVDDEVLPMLTLE 248

Query: 222 DLKDMGINAVGSRRKMYTAIQKLQKGF 248
           DLKDMGI+AVGSRRKMYTAIQKL KGF
Sbjct: 249 DLKDMGISAVGSRRKMYTAIQKLGKGF 275


>Glyma08g01230.1 
          Length = 264

 Score = 99.0 bits (245), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 100/261 (38%), Positives = 124/261 (47%), Gaps = 85/261 (32%)

Query: 46  KRQRRPSVRLGEIGDQRATGHGNDSHHTRRPTIPPWSWRIP------------REPSRAA 93
           KRQRRPSVRLG+IG  +      DSH  RR T P   W++             ++P +  
Sbjct: 30  KRQRRPSVRLGDIGGDQPY----DSH-ARRNTKP---WKLAFDNHHHHHRSKDKDPGKP- 80

Query: 94  SKARSATNPVNGGEEFGNSNSR---------------RGKAKRGST-TKRLRSEFASRTI 137
           SK R  TN     E    SN R               +   KRGS  TKR+RS + SR I
Sbjct: 81  SKTRPLTNLSEFNETLEPSNDREPGNIDTVAIGSWKVKESKKRGSVATKRVRSNWVSR-I 139

Query: 138 DE-----------------------NFDDDHA-------SPVHSVEENGLDCWNVDRSED 167
           D                         F+ +++       SP+HS+E  G+D         
Sbjct: 140 DGGGEGEGEKYNNEDEDGDDDDGYREFEVENSESPLKEQSPIHSMENLGVDG-------- 191

Query: 168 HRVRVSDGVESESRERRKNEGVRSWLFELGLSRYAPMFEIHEVDDELLPMLTLEDLKDMG 227
           HR RV  G     R      GV     ++GL  +  M  +HEVDDE+LP+LTLEDLKDMG
Sbjct: 192 HR-RVFKGT---MRMVVGGLGV----VKMGLG-FGLMDWVHEVDDEVLPLLTLEDLKDMG 242

Query: 228 INAVGSRRKMYTAIQKLQKGF 248
           I+AVGSRRKMYTAIQKL KGF
Sbjct: 243 ISAVGSRRKMYTAIQKLGKGF 263


>Glyma15g10850.1 
          Length = 42

 Score = 72.8 bits (177), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/40 (77%), Positives = 38/40 (95%)

Query: 198 LSRYAPMFEIHEVDDELLPMLTLEDLKDMGINAVGSRRKM 237
           L RYAP+F+IH+VDDE+LP+L LEDLKD+GINAVGSRRK+
Sbjct: 1   LGRYAPVFKIHKVDDEVLPLLMLEDLKDVGINAVGSRRKI 40


>Glyma06g24180.1 
          Length = 81

 Score = 55.1 bits (131), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/46 (84%), Positives = 40/46 (86%)

Query: 195 ELGLSRYAPMFEIHEVDDELLPMLTLEDLKDMGINAVGSRRKMYTA 240
           E  LSRYAPMFEIHEVDDELL ML LEDLKDMG+N  GSRRKMYTA
Sbjct: 34  ESKLSRYAPMFEIHEVDDELLLMLNLEDLKDMGMNIFGSRRKMYTA 79


>Glyma06g06090.1 
          Length = 641

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 45/76 (59%)

Query: 172 VSDGVESESRERRKNEGVRSWLFELGLSRYAPMFEIHEVDDELLPMLTLEDLKDMGINAV 231
           V D  E  +++  K   V  WL  LGL++Y  +F   EVD + L  LT EDL  MGI A+
Sbjct: 137 VPDDNEKGAQQVPKVASVVDWLRGLGLNKYEDVFVREEVDWDTLQWLTEEDLLSMGIAAL 196

Query: 232 GSRRKMYTAIQKLQKG 247
           G RRK+  A+ +L+KG
Sbjct: 197 GPRRKIVHALSELRKG 212