Miyakogusa Predicted Gene
- Lj1g3v3137850.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3137850.1 Non Chatacterized Hit- tr|A9NXN9|A9NXN9_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,40.6,1e-18,coiled-coil,NULL; seg,NULL; MYB_LIKE,Myb-like domain;
Myb_DNA-bind_4,NULL,CUFF.30114.1
(330 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g51790.1 478 e-135
Glyma08g28880.1 473 e-133
Glyma10g44620.1 384 e-107
Glyma20g39410.1 374 e-104
Glyma08g01050.1 129 3e-30
Glyma05g38580.1 112 4e-25
Glyma20g32540.1 66 5e-11
Glyma01g35370.1 49 8e-06
Glyma16g32580.1 49 9e-06
Glyma10g07730.1 49 9e-06
>Glyma18g51790.1
Length = 329
Score = 478 bits (1231), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/336 (73%), Positives = 266/336 (79%), Gaps = 13/336 (3%)
Query: 1 MSSEQPSKPNITTVDGEIDGAVNGSPPFAAAS---DERPTARLPRWTRQEILVLIQGKAD 57
M+ +QPS PN +DGA NG+ P +AA D RP ARLPRWTRQEILVLIQGK+D
Sbjct: 1 MALDQPSNPNA------VDGAGNGATPCSAADGGDDGRPAARLPRWTRQEILVLIQGKSD 54
Query: 58 AESRFKPGRAAGSAFGSSEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWES 117
AESRF+PGR +GSAFGS EPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWES
Sbjct: 55 AESRFRPGRGSGSAFGSGEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWES 114
Query: 118 SVKDETESFWLMRNDLRRERKLPGYFDREVYXXXXXXXXXXXXXXXXXIEMAPEAV-ARE 176
V+DE ESFWLMRNDLRRERKLPGYFDREVY EA A +
Sbjct: 115 QVRDEAESFWLMRNDLRRERKLPGYFDREVYNILDSPSSTAAAAAAETPVAVAEAASAGD 174
Query: 177 EEVHIYDSNRRVAGEDGLFSDCEKDEV--LASVKSVVAPVPISEKQYLPLLRGCQVESNG 234
EEVH+YDSNRRV EDGLFSD EKDEV LA+ K V APVP+SEKQY P L GC+ E N
Sbjct: 175 EEVHLYDSNRRVGSEDGLFSDSEKDEVLLLAAAKDVPAPVPLSEKQYQPHLHGCEGEGNP 234
Query: 235 QGTPNEKQPASNPEVGSTSQGERKRKRLATDAAEEETLQTQLIDVLEKNGKMLRDQLEAQ 294
QGT N K+ NPE+GSTSQGERKRKRLATD EEETLQ+QLIDVLEKNGKML DQLEAQ
Sbjct: 235 QGTTNGKRATPNPEMGSTSQGERKRKRLATD-GEEETLQSQLIDVLEKNGKMLHDQLEAQ 293
Query: 295 NMNFQLDRQHQKDTASSIIAVLDKLADALGRIADKL 330
N+NFQLDRQ QKDTAS+I+AVLDKLADALGRIADKL
Sbjct: 294 NLNFQLDRQQQKDTASNIVAVLDKLADALGRIADKL 329
>Glyma08g28880.1
Length = 326
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/337 (73%), Positives = 267/337 (79%), Gaps = 18/337 (5%)
Query: 1 MSSEQPSKPNITTVDGEIDGAVNGSPPFAAAS----DERPTARLPRWTRQEILVLIQGKA 56
M+ +Q S PN +DGA NG+ P +A D RP ARLPRWTRQEILVLIQGK+
Sbjct: 1 MALDQLSNPNA------VDGAGNGATPCSAVDGGIEDGRPAARLPRWTRQEILVLIQGKS 54
Query: 57 DAESRFKPGRAAGSAFGSSEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWE 116
DAESRF+PGR +GSAFGSSEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWE
Sbjct: 55 DAESRFRPGRGSGSAFGSSEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWE 114
Query: 117 SSVKDETESFWLMRNDLRRERKLPGYFDREVYXXXXXXXXXXXXXXXXXIEMAPEAVAR- 175
S V+DETESFWLMRNDLRRERKLPGYFDREVY P VA
Sbjct: 115 SQVRDETESFWLMRNDLRRERKLPGYFDREVYNILDSPSSTAAAAAAE----TPVPVATV 170
Query: 176 EEEVHIYDSNRRVAGEDGLFSDCEKDEV--LASVKSVVAPVPISEKQYLPLLRGCQVESN 233
EEEVH+YDSNRRV EDGLFSD EKDEV LA+ K V APVPISEKQY P L+GC+ E N
Sbjct: 171 EEEVHLYDSNRRVGSEDGLFSDSEKDEVLLLATTKDVPAPVPISEKQYQPHLQGCEGEGN 230
Query: 234 GQGTPNEKQPASNPEVGSTSQGERKRKRLATDAAEEETLQTQLIDVLEKNGKMLRDQLEA 293
QGT NEK+ NPE+GSTSQGERKRK LATD EEETLQ+QLIDVLEKNGKMLRDQLEA
Sbjct: 231 PQGTTNEKRANPNPEMGSTSQGERKRKWLATD-GEEETLQSQLIDVLEKNGKMLRDQLEA 289
Query: 294 QNMNFQLDRQHQKDTASSIIAVLDKLADALGRIADKL 330
Q +NFQLDRQ QKDTAS+I+AVLDKLADALGRIADKL
Sbjct: 290 QKLNFQLDRQQQKDTASNIVAVLDKLADALGRIADKL 326
>Glyma10g44620.1
Length = 325
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/313 (66%), Positives = 230/313 (73%), Gaps = 18/313 (5%)
Query: 31 ASDERPTA-RLPRWTRQEILVLIQGKADAESRFKPGRAAGSAFGSS--EPKWALVSSYCK 87
A DE A RLPRWTRQEILVLIQGK DAE++F+ GR AG FGS EPKWA VSSYC+
Sbjct: 18 AGDEGGKAPRLPRWTRQEILVLIQGKRDAENKFRRGRTAGLPFGSGQVEPKWASVSSYCR 77
Query: 88 KHGVNREPVQCRKRWSNLAGDYKKIKEWESSVKDETESFWLMRNDLRRERKLPGYFDREV 147
KHGVNR PVQCRKRWSNLAGDYKKIKEWES +++ETESFW+MRNDLRRERKLPG+FD+EV
Sbjct: 78 KHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIREETESFWVMRNDLRRERKLPGFFDKEV 137
Query: 148 Y-----XXXXXXXXXXXXXXXXXIEMAPEAVAREEEVHIYDSNRRVAG--EDGLFSDCEK 200
Y A E H+YDSNR G EDGLFSD E+
Sbjct: 138 YDILDSPAALALALSSSSPPPPTTTKTITLPAEEPLPHLYDSNRSAPGDGEDGLFSDFEQ 197
Query: 201 DEVLASVK---SVVAPVPISEKQYLPLLRGCQVESNGQGTPNEKQPASNPEVGSTSQGER 257
DEV AS K + AP+PISEK Y PLLR CQ E NEKQ SNPE+GSTSQGER
Sbjct: 198 DEVAASSKKNKDIPAPIPISEKLYQPLLRRCQAED----VTNEKQSTSNPEMGSTSQGER 253
Query: 258 KRKRLATDAAEEETLQTQLIDVLEKNGKMLRDQLEAQNMNFQLDRQHQKDTASSIIAVLD 317
KRKRLATD EEETLQ QLIDVLE+NGKML QLEAQN+NFQLDR+ +KD AS+++AVLD
Sbjct: 254 KRKRLATDG-EEETLQYQLIDVLERNGKMLSAQLEAQNINFQLDREQRKDHASNLVAVLD 312
Query: 318 KLADALGRIADKL 330
KLADALGRIADKL
Sbjct: 313 KLADALGRIADKL 325
>Glyma20g39410.1
Length = 319
Score = 374 bits (960), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/301 (66%), Positives = 222/301 (73%), Gaps = 17/301 (5%)
Query: 39 RLPRWTRQEILVLIQGKADAESRFKPGRAAGSAFGSS--EPKWALVSSYCKKHGVNREPV 96
RLPRWTRQEILVLIQGK DAE++F+ GR AG AFGS EPKWA VSSYC+KHGVNR PV
Sbjct: 27 RLPRWTRQEILVLIQGKRDAENKFRRGRTAGLAFGSGQVEPKWASVSSYCRKHGVNRGPV 86
Query: 97 QCRKRWSNLAGDYKKIKEWESSVKDETESFWLMRNDLRRERKLPGYFDREVYXXXXXXXX 156
QCRKRWSNLAGDYKKIKEWES ++DETESFW+MRNDLRRERKL G+FD+EVY
Sbjct: 87 QCRKRWSNLAGDYKKIKEWESQIRDETESFWVMRNDLRRERKLAGFFDKEVYDILDSGSG 146
Query: 157 XXXXXXXXXIEMAPEAVAREEEV-----HIYDSNRRVAGEDGLFSDCEKDEVL--ASVKS 209
P V H+YDSNR GEDGLFSD E+DE S K
Sbjct: 147 PTTLALSLSSSPPPTTTITTTTVPDDPPHLYDSNRSAPGEDGLFSDFEQDEEKNPPSNKD 206
Query: 210 VVAPVPISEKQYLPLLRGCQVESNGQGTPNEKQPASNPEVGSTSQGERKRKRLATDAAEE 269
+ AP+PISEKQY LR CQ E G NEK SNPE+GSTSQGERKRKRL TD EE
Sbjct: 207 IPAPIPISEKQY---LRRCQAE----GVTNEKLSTSNPEMGSTSQGERKRKRLTTD-GEE 258
Query: 270 ETLQTQLIDVLEKNGKMLRDQLEAQNMNFQLDRQHQKDTASSIIAVLDKLADALGRIADK 329
ETLQ QLIDVLE+NGKML QLEAQN+NFQLDR+ +KD AS+++AVLDKLADALG+IADK
Sbjct: 259 ETLQYQLIDVLERNGKMLSAQLEAQNINFQLDREQRKDHASNLVAVLDKLADALGKIADK 318
Query: 330 L 330
L
Sbjct: 319 L 319
>Glyma08g01050.1
Length = 227
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 131/249 (52%), Gaps = 35/249 (14%)
Query: 68 AGSAFGSSEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESSVKDETESFW 127
+ S + ++PKW +VSS C++ GV R VQCRKRW NL D++KIK+WESSV++E+ESFW
Sbjct: 13 SASGYVQTDPKWDMVSSLCQQRGVKRGAVQCRKRWGNLLTDFRKIKKWESSVREESESFW 72
Query: 128 LMRNDLRRERKLPGYFDREVYXXXXXXXXXXXXXXXXXIEMAPEAVAREEEVHIYDSNRR 187
+MRND+R+E+KLPG+FD VY ++MAP +V I D
Sbjct: 73 IMRNDVRKEKKLPGFFDSVVYNVLDGGVCTTVAFPLTLVKMAP------NKVEILD---- 122
Query: 188 VAGEDGLFSDCEKDEVLASVKSVVAPVPISEKQYLPLLRGCQVESNGQGTPNEKQPASNP 247
GE +S E++ +++ P + K+ + +++P
Sbjct: 123 --GEKMGWSTEEENMETNITGNMINGFPKTPKKGI-----------------QREPIFQE 163
Query: 248 EVGSTSQGERKRKRLATDAAEEETLQTQLIDVLEKNGKMLRDQLEAQNMNFQLDRQHQKD 307
+G KRKRL++D +E+ T + +L +N +L+ + QN+N+QL R QK
Sbjct: 164 GMGY------KRKRLSSDISEDSTDFNNITKLLRRNSDILKAHIGTQNINYQLARDQQKQ 217
Query: 308 TASSIIAVL 316
I+A L
Sbjct: 218 QTDIIVAAL 226
>Glyma05g38580.1
Length = 306
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Query: 68 AGSAFGSSEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESSVKD-ETESF 126
+ S ++PKW +VSS C++ GV R VQCRKRW NL D++KIK+WES VK+ E+ESF
Sbjct: 13 SASGCVQTDPKWDMVSSLCQQRGVKRGAVQCRKRWGNLLTDFRKIKKWESGVKEVESESF 72
Query: 127 WLMRNDLRRERKLPGYFDREVYXXXXXXXXXXXXXXXXXIEMAPEA 172
W+MRND+R+E+KLPG+FD VY ++M P+
Sbjct: 73 WIMRNDVRKEKKLPGFFDSVVYNVLDGGVCTTVAFPLTLVKMVPKG 118
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 258 KRKRLATDAAEEET-LQTQLIDVLEKNGKMLRDQLEAQNMNFQLDRQHQKDTASSIIAVL 316
KRKRL D++E+ T + + ++L +N ML+ L AQN+N+QL R QK I+A L
Sbjct: 233 KRKRLPLDSSEDCTDFNSNITNLLRRNSDMLKAHLGAQNINYQLARDQQKQQTDIIVAAL 292
Query: 317 DKLADALGRIADKL 330
KL DAL +IADKL
Sbjct: 293 GKLTDALTKIADKL 306
>Glyma20g32540.1
Length = 270
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 24 GSPPFAAASDERPTARLPRWTRQEILVLIQGKA-DAESRFKPGRAAGSAFGSS----EPK 78
+ P ++++ R WT QE L+LI K D E R K A ++ ++ E +
Sbjct: 2 ATAPSSSSTTLAREYRKGNWTIQETLILITAKKLDDERRLKTPAACSTSTTTTRTSGELR 61
Query: 79 WALVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESSVKDETE-------SFWLMRN 131
W V +YC HG R QC +W NL DYKK++++ES D S+W +
Sbjct: 62 WKWVENYCWSHGCLRSQNQCNDKWDNLLRDYKKVRDYESKSNDNDNNNNKHFPSYWTLNK 121
Query: 132 DLRRERKLPGYFDREVY 148
R+E+ LP EVY
Sbjct: 122 QQRKEQNLPSNMVFEVY 138
>Glyma01g35370.1
Length = 277
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 25 SPPFAAASDERPTARLPRWTRQEILVLIQGKADAESRFKPGRAAGSAFGSSEPKWALVSS 84
SP AA +ER A+ P+W++QE I +A+ E F +A ++ W +VS+
Sbjct: 2 SPAVPAAREERGPAQ-PQWSQQETREFIAIRAELERDF-------TASKRNKTLWEVVSA 53
Query: 85 YCKKHGVNREPVQCRKRWSNLAGDYK 110
++ G R P QC+ +W NL YK
Sbjct: 54 KMRERGFRRSPEQCKCKWKNLVNRYK 79
>Glyma16g32580.1
Length = 944
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 82 VSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESSVKDET--ESFWLMRNDLRRERKL 139
V+ + K+HGVNR+ +W N+ G+++K+ EWE + E +S++ + R+ +L
Sbjct: 145 VAEFLKRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQIGKSYFRLSPYERKLHRL 204
Query: 140 PGYFDREVY 148
P FD +V+
Sbjct: 205 PASFDEDVF 213
>Glyma10g07730.1
Length = 594
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 42 RWTRQEILVLIQGKADAESRFKPGRAAGSAFGSSEPKWALVSS-YCKKHGVNREPVQCRK 100
RW RQE L L++ ++ + +FK G P W VS C++HG R +CR+
Sbjct: 128 RWPRQETLTLLEIRSRLDPKFKEANHKG-------PLWDEVSRIMCEEHGYQRSGKKCRE 180
Query: 101 RWSNLAGDYKKIKEWESSVKD 121
++ NL YKK KE ++ D
Sbjct: 181 KFENLYKYYKKTKEGKAGRHD 201