Miyakogusa Predicted Gene

Lj1g3v3103940.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3103940.1 tr|G7KSU9|G7KSU9_MEDTR Protein YIF1B-B
OS=Medicago truncatula GN=MTR_7g020800 PE=4 SV=1,85.39,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; YIP1 INTERACTING FACTOR HOMOLOG (YIF1
PROTEIN),Hrf1; YIF1,Hrf1,CUFF.30054.1
         (267 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g28500.1                                                       381   e-106
Glyma13g07120.1                                                       376   e-104
Glyma19g05590.1                                                       373   e-103
Glyma18g51410.1                                                       372   e-103
Glyma08g28500.2                                                       352   2e-97

>Glyma08g28500.1 
          Length = 273

 Score =  381 bits (978), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 190/267 (71%), Positives = 207/267 (77%)

Query: 1   MYNNVRPQLGMXXXXXXXXXXXXXNVLGSAFNTXXXXXXXXXXXXXXEKIFGSSSDYVQS 60
           MY N+    G+             N+ G+AFN+              EKI GSSS+YVQS
Sbjct: 1   MYTNIGMPPGVPQHHPQPPMSSQPNLFGNAFNSSGSGLIRGGLGAYGEKILGSSSEYVQS 60

Query: 61  NISRYFSDPQYYFQVNGHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120
           NISRYFSDPQYYFQVN HYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP
Sbjct: 61  NISRYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120

Query: 121 DLYIPMMAFGTYVILAGISLGFHGKFSPEALNWLFIKGLIGWVMQTALLKGTLVLLGSGE 180
           DLYIP+MAFGTYV+LAGISLG  GKFSPEALNWLFIKGL+GW MQTALLK TL+ LGSGE
Sbjct: 121 DLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIKGLVGWFMQTALLKVTLLSLGSGE 180

Query: 181 AAILDMVSYAGYAFPGLCLAVLGRILGGYSYYILMPWTCLCMGVFLVKTMKRVLFAEVRS 240
           A +LD+++YAGY FPGLCLAV GRI+  YSYY LM WTCLCM V+LVKTMKRVLFAEVRS
Sbjct: 181 APLLDIIAYAGYTFPGLCLAVSGRIIWSYSYYFLMLWTCLCMAVYLVKTMKRVLFAEVRS 240

Query: 241 YDSSKHHYVXXXXXXXXXXXXTWLGNI 267
           YDSSKHHY+            TWLGNI
Sbjct: 241 YDSSKHHYLLLLIALAQFPLFTWLGNI 267


>Glyma13g07120.1 
          Length = 269

 Score =  376 bits (965), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/267 (71%), Positives = 206/267 (77%), Gaps = 4/267 (1%)

Query: 1   MYNNVRPQLGMXXXXXXXXXXXXXNVLGSAFNTXXXXXXXXXXXXXXEKIFGSSSDYVQS 60
           MY+NV  Q G+             N  GSAFN                KI GSSS+YVQS
Sbjct: 1   MYSNVGSQPGVQQPQTSLPP----NPFGSAFNVAGSGLIRGGLGAYGGKILGSSSEYVQS 56

Query: 61  NISRYFSDPQYYFQVNGHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120
           NISRYFSDPQYYFQVN  YVKNKLKVVL PFLHRGHWTRITEPVGGRLSYKPPIYDINAP
Sbjct: 57  NISRYFSDPQYYFQVNDQYVKNKLKVVLLPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 116

Query: 121 DLYIPMMAFGTYVILAGISLGFHGKFSPEALNWLFIKGLIGWVMQTALLKGTLVLLGSGE 180
           DLYIP+MAFGTYVILAG+SLG HGKFSPEALN LFIKGL+GW MQ ALLK TL+ LGSGE
Sbjct: 117 DLYIPLMAFGTYVILAGLSLGLHGKFSPEALNLLFIKGLLGWFMQAALLKVTLLSLGSGE 176

Query: 181 AAILDMVSYAGYAFPGLCLAVLGRILGGYSYYILMPWTCLCMGVFLVKTMKRVLFAEVRS 240
           A +LD+++YAGY F G+CLAVLGRI+ GYSYY LMPWTCLCMGVFLVKTMKRVLFAEVRS
Sbjct: 177 APLLDIIAYAGYTFTGICLAVLGRIILGYSYYFLMPWTCLCMGVFLVKTMKRVLFAEVRS 236

Query: 241 YDSSKHHYVXXXXXXXXXXXXTWLGNI 267
           YDSS+HHY+            TWLGNI
Sbjct: 237 YDSSRHHYLLLFIALVQFPLFTWLGNI 263


>Glyma19g05590.1 
          Length = 269

 Score =  373 bits (958), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/267 (71%), Positives = 204/267 (76%), Gaps = 4/267 (1%)

Query: 1   MYNNVRPQLGMXXXXXXXXXXXXXNVLGSAFNTXXXXXXXXXXXXXXEKIFGSSSDYVQS 60
           MY NV  Q G+             N  GSAFN                KI GSSS+YVQS
Sbjct: 1   MYGNVGSQPGVQQSQTSLPP----NPFGSAFNVAGSGLIRGGLGAYGGKILGSSSEYVQS 56

Query: 61  NISRYFSDPQYYFQVNGHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120
           NISRYFSDPQYYFQVN  YVKNKLKVVL PFLHRGHWTRITEPVGGRLSYKPPIYDINAP
Sbjct: 57  NISRYFSDPQYYFQVNDQYVKNKLKVVLLPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 116

Query: 121 DLYIPMMAFGTYVILAGISLGFHGKFSPEALNWLFIKGLIGWVMQTALLKGTLVLLGSGE 180
           DLYIP+MAFGTYVILAG+SLG H KFSPEALN LFIKGL+GW MQ ALLK TL+ LGSGE
Sbjct: 117 DLYIPLMAFGTYVILAGLSLGLHRKFSPEALNLLFIKGLLGWFMQAALLKVTLLSLGSGE 176

Query: 181 AAILDMVSYAGYAFPGLCLAVLGRILGGYSYYILMPWTCLCMGVFLVKTMKRVLFAEVRS 240
           A +LD+++YAGY F G+CLAVLGRI+ GYSYY LMPWTCLCMGVFLVKTMKRVLFAEVRS
Sbjct: 177 APLLDIIAYAGYTFTGICLAVLGRIILGYSYYFLMPWTCLCMGVFLVKTMKRVLFAEVRS 236

Query: 241 YDSSKHHYVXXXXXXXXXXXXTWLGNI 267
           YDSS+HHY+            TWLGNI
Sbjct: 237 YDSSRHHYLLLFIALVQFPLFTWLGNI 263


>Glyma18g51410.1 
          Length = 293

 Score =  372 bits (955), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 185/267 (69%), Positives = 204/267 (76%)

Query: 1   MYNNVRPQLGMXXXXXXXXXXXXXNVLGSAFNTXXXXXXXXXXXXXXEKIFGSSSDYVQS 60
           MY N+    G+             N+ G+AFN+              EKI GSSS+YVQS
Sbjct: 21  MYTNIGMPPGVPQHHPQPPTSSQPNLFGNAFNSAGSGLIRGGLGAYGEKILGSSSEYVQS 80

Query: 61  NISRYFSDPQYYFQVNGHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120
           N+SRYFSDPQYYFQVN HYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP
Sbjct: 81  NVSRYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 140

Query: 121 DLYIPMMAFGTYVILAGISLGFHGKFSPEALNWLFIKGLIGWVMQTALLKGTLVLLGSGE 180
           DLYIP+MAFGTYV+LAGISLG  G FSPEALNWLFIKGL+GW MQTALLK TL+ LGSGE
Sbjct: 141 DLYIPLMAFGTYVVLAGISLGLRGMFSPEALNWLFIKGLVGWFMQTALLKVTLLSLGSGE 200

Query: 181 AAILDMVSYAGYAFPGLCLAVLGRILGGYSYYILMPWTCLCMGVFLVKTMKRVLFAEVRS 240
           A +LD+++ AGY F GLCLAV GR++  YSYY LM WTC+CM VFLVKTMKRVLFAEVRS
Sbjct: 201 APLLDIIANAGYTFAGLCLAVCGRMIWSYSYYFLMLWTCICMAVFLVKTMKRVLFAEVRS 260

Query: 241 YDSSKHHYVXXXXXXXXXXXXTWLGNI 267
           YDSSKHHY+            TWLGNI
Sbjct: 261 YDSSKHHYLLLFIALAQFPLFTWLGNI 287


>Glyma08g28500.2 
          Length = 214

 Score =  352 bits (904), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 169/206 (82%), Positives = 180/206 (87%)

Query: 62  ISRYFSDPQYYFQVNGHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPD 121
           ISRYFSDPQYYFQVN HYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPD
Sbjct: 3   ISRYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPD 62

Query: 122 LYIPMMAFGTYVILAGISLGFHGKFSPEALNWLFIKGLIGWVMQTALLKGTLVLLGSGEA 181
           LYIP+MAFGTYV+LAGISLG  GKFSPEALNWLFIKGL+GW MQTALLK TL+ LGSGEA
Sbjct: 63  LYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIKGLVGWFMQTALLKVTLLSLGSGEA 122

Query: 182 AILDMVSYAGYAFPGLCLAVLGRILGGYSYYILMPWTCLCMGVFLVKTMKRVLFAEVRSY 241
            +LD+++YAGY FPGLCLAV GRI+  YSYY LM WTCLCM V+LVKTMKRVLFAEVRSY
Sbjct: 123 PLLDIIAYAGYTFPGLCLAVSGRIIWSYSYYFLMLWTCLCMAVYLVKTMKRVLFAEVRSY 182

Query: 242 DSSKHHYVXXXXXXXXXXXXTWLGNI 267
           DSSKHHY+            TWLGNI
Sbjct: 183 DSSKHHYLLLLIALAQFPLFTWLGNI 208