Miyakogusa Predicted Gene

Lj1g3v3053750.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3053750.2 tr|F6KSN1|F6KSN1_FRAAN MADS-1 OS=Fragaria
ananassa PE=2 SV=1,53.93,4e-19, ,CUFF.29966.2
         (89 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g27670.1                                                       153   4e-38
Glyma18g50900.1                                                       151   2e-37
Glyma13g06730.2                                                       145   9e-36
Glyma13g06730.1                                                       145   1e-35
Glyma19g04320.2                                                       142   1e-34
Glyma19g04320.1                                                       142   1e-34
Glyma08g11120.1                                                        59   2e-09
Glyma05g28140.2                                                        58   2e-09
Glyma05g28140.1                                                        55   2e-08
Glyma11g36890.1                                                        54   4e-08
Glyma11g36890.3                                                        54   5e-08
Glyma11g36890.4                                                        54   5e-08
Glyma01g08130.1                                                        48   3e-06

>Glyma08g27670.1 
          Length = 250

 Score =  153 bits (386), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 76/91 (83%), Positives = 82/91 (90%), Gaps = 3/91 (3%)

Query: 1   MLDQLSDLQNKEQMLVEANRSLSVKLDDINSRNHYRQSWDQAGDQSMQY-GGSQNAHS-Q 58
           MLDQLSDLQ KEQMLVEANRSL+VKL++INSRNHYRQSW+ AGDQSM Y GG QN+HS Q
Sbjct: 146 MLDQLSDLQTKEQMLVEANRSLTVKLEEINSRNHYRQSWE-AGDQSMPYGGGPQNSHSHQ 204

Query: 59  GFFQPLECNPTLQIGSDYRYNGVASDQMAAT 89
           GFFQPLECNPTLQIG DYRYN VASDQ+ AT
Sbjct: 205 GFFQPLECNPTLQIGPDYRYNDVASDQITAT 235


>Glyma18g50900.1 
          Length = 255

 Score =  151 bits (381), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 73/95 (76%), Positives = 80/95 (84%), Gaps = 7/95 (7%)

Query: 1   MLDQLSDLQNKEQMLVEANRSLSVKLDDINSRNHYRQSWDQAGDQSMQYGGS------QN 54
           MLDQLSDLQ KEQMLVEANRSL+VKL++INSRNHYRQSW+ AGDQSM YGG        +
Sbjct: 147 MLDQLSDLQTKEQMLVEANRSLTVKLEEINSRNHYRQSWE-AGDQSMPYGGGGPENSHSH 205

Query: 55  AHSQGFFQPLECNPTLQIGSDYRYNGVASDQMAAT 89
           +HSQGFFQPLECNPTL IG DYRYN VASDQ+ AT
Sbjct: 206 SHSQGFFQPLECNPTLHIGPDYRYNAVASDQITAT 240


>Glyma13g06730.2 
          Length = 248

 Score =  145 bits (366), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 71/90 (78%), Positives = 82/90 (91%), Gaps = 3/90 (3%)

Query: 1   MLDQLSDLQNKEQMLVEANRSLSVKLDDINSRNHYRQSWDQAGDQSMQYGGSQNAHSQGF 60
           MLDQL+DLQNKE MLVEANRSL++KL++INSRN YRQ+W+ AG+QSM YG +QNAHSQGF
Sbjct: 146 MLDQLADLQNKEHMLVEANRSLTMKLEEINSRNQYRQTWE-AGEQSMSYG-TQNAHSQGF 203

Query: 61  FQPLECNPTLQIGSDYRYNGVASD-QMAAT 89
           FQPLECNPTLQIGSDYRYN  AS+ Q+AAT
Sbjct: 204 FQPLECNPTLQIGSDYRYNPEASEQQLAAT 233


>Glyma13g06730.1 
          Length = 249

 Score =  145 bits (366), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 71/90 (78%), Positives = 82/90 (91%), Gaps = 3/90 (3%)

Query: 1   MLDQLSDLQNKEQMLVEANRSLSVKLDDINSRNHYRQSWDQAGDQSMQYGGSQNAHSQGF 60
           MLDQL+DLQNKE MLVEANRSL++KL++INSRN YRQ+W+ AG+QSM YG +QNAHSQGF
Sbjct: 147 MLDQLADLQNKEHMLVEANRSLTMKLEEINSRNQYRQTWE-AGEQSMSYG-TQNAHSQGF 204

Query: 61  FQPLECNPTLQIGSDYRYNGVASD-QMAAT 89
           FQPLECNPTLQIGSDYRYN  AS+ Q+AAT
Sbjct: 205 FQPLECNPTLQIGSDYRYNPEASEQQLAAT 234


>Glyma19g04320.2 
          Length = 248

 Score =  142 bits (357), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/90 (77%), Positives = 81/90 (90%), Gaps = 3/90 (3%)

Query: 1   MLDQLSDLQNKEQMLVEANRSLSVKLDDINSRNHYRQSWDQAGDQSMQYGGSQNAHSQGF 60
           MLDQL+DLQNKE MLVEANRSL++KL++INSRN YRQ+W+ AG+QSM Y G+QNAHSQGF
Sbjct: 146 MLDQLADLQNKEHMLVEANRSLTMKLEEINSRNQYRQTWE-AGEQSMPY-GTQNAHSQGF 203

Query: 61  FQPLECNPTLQIGSDYRYNGVASD-QMAAT 89
           FQPLECNPTLQIGSDYRY   AS+ Q+AAT
Sbjct: 204 FQPLECNPTLQIGSDYRYIPEASEQQLAAT 233


>Glyma19g04320.1 
          Length = 249

 Score =  142 bits (357), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/90 (77%), Positives = 81/90 (90%), Gaps = 3/90 (3%)

Query: 1   MLDQLSDLQNKEQMLVEANRSLSVKLDDINSRNHYRQSWDQAGDQSMQYGGSQNAHSQGF 60
           MLDQL+DLQNKE MLVEANRSL++KL++INSRN YRQ+W+ AG+QSM Y G+QNAHSQGF
Sbjct: 147 MLDQLADLQNKEHMLVEANRSLTMKLEEINSRNQYRQTWE-AGEQSMPY-GTQNAHSQGF 204

Query: 61  FQPLECNPTLQIGSDYRYNGVASD-QMAAT 89
           FQPLECNPTLQIGSDYRY   AS+ Q+AAT
Sbjct: 205 FQPLECNPTLQIGSDYRYIPEASEQQLAAT 234


>Glyma08g11120.1 
          Length = 241

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 42/76 (55%), Gaps = 9/76 (11%)

Query: 1   MLDQLSDLQNKEQMLVEANRSLSVKLD--DINSRNHYRQSWDQAGDQSMQYG-GSQNAHS 57
           MLDQLSDLQ KE +L EANRSL  +L+   IN            G + M YG      H 
Sbjct: 148 MLDQLSDLQRKEHLLSEANRSLRQRLEGYQINPLQL------NPGVEEMGYGRNPAQTHG 201

Query: 58  QGFFQPLECNPTLQIG 73
           +  FQ +EC PTLQIG
Sbjct: 202 EALFQQMECEPTLQIG 217


>Glyma05g28140.2 
          Length = 241

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 42/76 (55%), Gaps = 9/76 (11%)

Query: 1   MLDQLSDLQNKEQMLVEANRSLSVKLD--DINSRNHYRQSWDQAGDQSMQYGG-SQNAHS 57
           MLDQLSDLQ KE +L EANRSL  +L+   IN            G + M YG      H 
Sbjct: 148 MLDQLSDLQRKEHLLSEANRSLRQRLEGYQINPLQL------NPGVEEMGYGRHPAQTHG 201

Query: 58  QGFFQPLECNPTLQIG 73
           +  FQ +EC PTLQIG
Sbjct: 202 EALFQQMECEPTLQIG 217


>Glyma05g28140.1 
          Length = 242

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 4/74 (5%)

Query: 1   MLDQLSDLQNKEQMLVEANRSLSVKLDDINSRNHYRQSWDQAGDQSMQYGG-SQNAHSQG 59
           MLDQLSDLQ KE +L EANRSL  +  +    N  + +    G + M YG      H + 
Sbjct: 148 MLDQLSDLQRKEHLLSEANRSLRQRQLEGYQINPLQLN---PGVEEMGYGRHPAQTHGEA 204

Query: 60  FFQPLECNPTLQIG 73
            FQ +EC PTLQIG
Sbjct: 205 LFQQMECEPTLQIG 218


>Glyma11g36890.1 
          Length = 243

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 7/75 (9%)

Query: 1   MLDQLSDLQNKEQMLVEANRSLSVKLDD--INSRNHYRQSWDQAGDQSMQYGGSQNAHSQ 58
           MLDQLSDLQ KE  L E+NR L  +L++  IN       S ++ G    +Y G    H+ 
Sbjct: 150 MLDQLSDLQRKEHFLGESNRDLIQRLEEFQINPL-QLNPSAEEMGHG--RYPGQPQGHA- 205

Query: 59  GFFQPLECNPTLQIG 73
             FQPL+C PTLQIG
Sbjct: 206 -LFQPLDCEPTLQIG 219


>Glyma11g36890.3 
          Length = 241

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 7/75 (9%)

Query: 1   MLDQLSDLQNKEQMLVEANRSLSVKLDD--INSRNHYRQSWDQAGDQSMQYGGSQNAHSQ 58
           MLDQLSDLQ KE  L E+NR L  +L++  IN       S ++ G    +Y G    H+ 
Sbjct: 148 MLDQLSDLQRKEHFLGESNRDLIQRLEEFQINPL-QLNPSAEEMGHG--RYPGQPQGHA- 203

Query: 59  GFFQPLECNPTLQIG 73
             FQPL+C PTLQIG
Sbjct: 204 -LFQPLDCEPTLQIG 217


>Glyma11g36890.4 
          Length = 179

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 7/75 (9%)

Query: 1   MLDQLSDLQNKEQMLVEANRSLSVKLDD--INSRNHYRQSWDQAGDQSMQYGGSQNAHSQ 58
           MLDQLSDLQ KE  L E+NR L  +L++  IN       S ++ G    +Y G    H+ 
Sbjct: 86  MLDQLSDLQRKEHFLGESNRDLIQRLEEFQINPL-QLNPSAEEMGHG--RYPGQPQGHA- 141

Query: 59  GFFQPLECNPTLQIG 73
             FQPL+C PTLQIG
Sbjct: 142 -LFQPLDCEPTLQIG 155


>Glyma01g08130.1 
          Length = 246

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 12/80 (15%)

Query: 1   MLDQLSDLQNKEQMLVEANRSLSVKLDDINSRNHYRQSWDQAGDQSMQYGGSQNAH---S 57
           MLDQLSDL  KE+ML+E N  L  KL++IN     + +W+ A +Q+  Y    N H   +
Sbjct: 147 MLDQLSDLHRKEEMLLETNNILRNKLEEINVA--LQPTWE-AREQNAPY----NCHPPQT 199

Query: 58  QGFFQ--PLECNPTLQIGSD 75
           +G+++     C+ TL+IG D
Sbjct: 200 EGYYETATAHCSSTLRIGYD 219