Miyakogusa Predicted Gene

Lj1g3v3028300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3028300.1 Non Chatacterized Hit- tr|F4Q4B9|F4Q4B9_DICFS
Putative uncharacterized protein OS=Dictyostelium
fasc,40.71,3e-19,KOW,KOW; no description,Ribosomal protein L24,
SH3-like; MITOCHONDRIAL RIBOSOMAL PROTEIN L24,Ribosom,CUFF.29937.1
         (159 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g31080.2                                                       295   1e-80
Glyma17g31080.1                                                       295   1e-80
Glyma07g29720.1                                                       291   2e-79
Glyma02g16450.1                                                       286   8e-78
Glyma18g14560.1                                                       207   3e-54
Glyma10g03380.1                                                       174   3e-44
Glyma18g12500.1                                                        96   2e-20
Glyma12g34400.1                                                        61   6e-10
Glyma13g36150.1                                                        60   7e-10
Glyma12g34400.2                                                        55   3e-08

>Glyma17g31080.2 
          Length = 159

 Score =  295 bits (755), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 146/159 (91%), Positives = 153/159 (96%)

Query: 1   MGWKAAEKLIRNWKIVRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQG 60
           MGWKAAEKLIR+WK+VRGDNVMIIRGKDKGETG IKRVIRSQNRVIVEGKNLVKKHIKQG
Sbjct: 1   MGWKAAEKLIRHWKVVRGDNVMIIRGKDKGETGTIKRVIRSQNRVIVEGKNLVKKHIKQG 60

Query: 61  QGHEGGIFTVEAPIHASNVQVRDPVTGNPCKIGIKYLEDGTRVRVSRGIGASGSIIPRPE 120
           QGHEGGIFTVEAPIHASNVQV DPVTG PCKIG KYLEDGT+VRVSRGIG+SGSIIPRPE
Sbjct: 61  QGHEGGIFTVEAPIHASNVQVLDPVTGKPCKIGHKYLEDGTKVRVSRGIGSSGSIIPRPE 120

Query: 121 ILKIRTTARPSVLGPRDTPMDLVVEKTYDAKTGRGMPEL 159
           IL IRTT RP+VLGP+DTPMDLV+EKTYDAKTGRGMPEL
Sbjct: 121 ILMIRTTPRPTVLGPKDTPMDLVLEKTYDAKTGRGMPEL 159


>Glyma17g31080.1 
          Length = 159

 Score =  295 bits (755), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 146/159 (91%), Positives = 153/159 (96%)

Query: 1   MGWKAAEKLIRNWKIVRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQG 60
           MGWKAAEKLIR+WK+VRGDNVMIIRGKDKGETG IKRVIRSQNRVIVEGKNLVKKHIKQG
Sbjct: 1   MGWKAAEKLIRHWKVVRGDNVMIIRGKDKGETGTIKRVIRSQNRVIVEGKNLVKKHIKQG 60

Query: 61  QGHEGGIFTVEAPIHASNVQVRDPVTGNPCKIGIKYLEDGTRVRVSRGIGASGSIIPRPE 120
           QGHEGGIFTVEAPIHASNVQV DPVTG PCKIG KYLEDGT+VRVSRGIG+SGSIIPRPE
Sbjct: 61  QGHEGGIFTVEAPIHASNVQVLDPVTGKPCKIGHKYLEDGTKVRVSRGIGSSGSIIPRPE 120

Query: 121 ILKIRTTARPSVLGPRDTPMDLVVEKTYDAKTGRGMPEL 159
           IL IRTT RP+VLGP+DTPMDLV+EKTYDAKTGRGMPEL
Sbjct: 121 ILMIRTTPRPTVLGPKDTPMDLVLEKTYDAKTGRGMPEL 159


>Glyma07g29720.1 
          Length = 159

 Score =  291 bits (745), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 143/159 (89%), Positives = 153/159 (96%)

Query: 1   MGWKAAEKLIRNWKIVRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQG 60
           MGWKAAEKLIR+WK++RGDNVMIIRGKDKGETG IKRVIR+QNRVIVEGKNLVKKHIKQG
Sbjct: 1   MGWKAAEKLIRHWKVLRGDNVMIIRGKDKGETGNIKRVIRTQNRVIVEGKNLVKKHIKQG 60

Query: 61  QGHEGGIFTVEAPIHASNVQVRDPVTGNPCKIGIKYLEDGTRVRVSRGIGASGSIIPRPE 120
           QGHEGGIFTVEAPIHASNVQV DPVT  PCK+G KYLEDG++VRVSRGIGASGSIIPRPE
Sbjct: 61  QGHEGGIFTVEAPIHASNVQVIDPVTRKPCKVGTKYLEDGSKVRVSRGIGASGSIIPRPE 120

Query: 121 ILKIRTTARPSVLGPRDTPMDLVVEKTYDAKTGRGMPEL 159
           ILKIRTT RP+VLGP+DTPMDLV+EKTYDAKTGRGMPEL
Sbjct: 121 ILKIRTTPRPTVLGPKDTPMDLVLEKTYDAKTGRGMPEL 159


>Glyma02g16450.1 
          Length = 159

 Score =  286 bits (731), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 138/159 (86%), Positives = 152/159 (95%)

Query: 1   MGWKAAEKLIRNWKIVRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQG 60
           MGWKAAEKLIR+WKI+RGDNVMI RGKDKGETG+IKRVIRSQNRVIVE KNLVKKHIKQG
Sbjct: 1   MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGIIKRVIRSQNRVIVESKNLVKKHIKQG 60

Query: 61  QGHEGGIFTVEAPIHASNVQVRDPVTGNPCKIGIKYLEDGTRVRVSRGIGASGSIIPRPE 120
           QGHEGGIFTVEAP+HASNVQV DPVTG PCK+G+KYLEDGT+VRVSRGIG SGSI+PRPE
Sbjct: 61  QGHEGGIFTVEAPLHASNVQVLDPVTGKPCKVGVKYLEDGTKVRVSRGIGTSGSIVPRPE 120

Query: 121 ILKIRTTARPSVLGPRDTPMDLVVEKTYDAKTGRGMPEL 159
           ILKIRTT RP+VLGP++TPM+LV+EKT +AKTGRGMPEL
Sbjct: 121 ILKIRTTPRPAVLGPKNTPMNLVLEKTCNAKTGRGMPEL 159


>Glyma18g14560.1 
          Length = 138

 Score =  207 bits (528), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 104/139 (74%), Positives = 118/139 (84%), Gaps = 6/139 (4%)

Query: 1   MGWKAAEKLIRNWKIVRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQG 60
           MGWKAAEKLIR+WKI+RGDNVMI R  DKGETG+IKRVIRSQN VIV      KKHIKQG
Sbjct: 1   MGWKAAEKLIRHWKILRGDNVMITRDIDKGETGIIKRVIRSQNYVIV------KKHIKQG 54

Query: 61  QGHEGGIFTVEAPIHASNVQVRDPVTGNPCKIGIKYLEDGTRVRVSRGIGASGSIIPRPE 120
           +GHEGGIFTVEAP+HASNVQV DPV G PCK+G+KYLEDGT+VRVSRGIG  GSI+PRP+
Sbjct: 55  KGHEGGIFTVEAPLHASNVQVLDPVIGYPCKVGVKYLEDGTKVRVSRGIGELGSIVPRPK 114

Query: 121 ILKIRTTARPSVLGPRDTP 139
           ILKIRT +RP++   +  P
Sbjct: 115 ILKIRTISRPTIFVDKTWP 133


>Glyma10g03380.1 
          Length = 170

 Score =  174 bits (441), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 87/107 (81%), Positives = 96/107 (89%), Gaps = 1/107 (0%)

Query: 1   MGWKAAEKLIRNWKIVRGDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIKQG 60
           MGWKAAEKLIR WKI+RGDNVMI RGKDKGETG+IKRVI SQNRVIVEGKNLVKKHIKQG
Sbjct: 1   MGWKAAEKLIRRWKILRGDNVMITRGKDKGETGIIKRVICSQNRVIVEGKNLVKKHIKQG 60

Query: 61  QGHEGGIFTVEAPIHASNVQVRDPVTGNPCKIGIKYLEDGTRVRVSR 107
           QGH+GGIFTVE P+HASNVQV +PVTG   ++ +KYLEDGT+V V R
Sbjct: 61  QGHKGGIFTVEDPLHASNVQVLNPVTG-LARLELKYLEDGTKVSVQR 106


>Glyma18g12500.1 
          Length = 101

 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/92 (57%), Positives = 63/92 (68%), Gaps = 14/92 (15%)

Query: 42  QNRVIVEGKNLVKKHIKQGQ-GHEGGIFTVEAPIHASNVQVRDPVTGNPCKIGIKYLEDG 100
           QN VIV+GKNL+   I         GIF V+AP+             +PCK+G+KYLEDG
Sbjct: 4   QNCVIVKGKNLLLFSIPLSIISSNRGIFIVKAPL-------------DPCKVGVKYLEDG 50

Query: 101 TRVRVSRGIGASGSIIPRPEILKIRTTARPSV 132
           T+VRVSRGIG SGSI+PRPEILKIRTT RP+V
Sbjct: 51  TKVRVSRGIGTSGSIVPRPEILKIRTTLRPTV 82


>Glyma12g34400.1 
          Length = 194

 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 1/88 (1%)

Query: 18  GDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIK-QGQGHEGGIFTVEAPIHA 76
           GD V +I G+++G+ G I ++ +  + VIV+  NL  KH+K + +G  G I  +E PIH+
Sbjct: 74  GDTVQVISGRERGKVGEITKIFKHNSTVIVKDLNLKTKHVKSREEGEPGQIIKIEGPIHS 133

Query: 77  SNVQVRDPVTGNPCKIGIKYLEDGTRVR 104
           SNV +         ++G K L++G +VR
Sbjct: 134 SNVMLYSKDQKVASRVGHKVLDNGKKVR 161


>Glyma13g36150.1 
          Length = 194

 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 1/88 (1%)

Query: 18  GDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIK-QGQGHEGGIFTVEAPIHA 76
           GD V +I G+++G+ G I ++ +  + VIV+  NL  KH+K + +G  G I  +E PIH+
Sbjct: 74  GDTVQVISGRERGKVGEITKIFKHNSTVIVKDLNLKTKHVKSREEGEPGQIIKIEGPIHS 133

Query: 77  SNVQVRDPVTGNPCKIGIKYLEDGTRVR 104
           SNV +         ++G K L++G +VR
Sbjct: 134 SNVMLYSKDQKVASRVGHKVLDNGKKVR 161


>Glyma12g34400.2 
          Length = 181

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 5/81 (6%)

Query: 18  GDNVMIIRGKDKGETGLIKRVIRSQNRVIVEGKNLVKKHIK-QGQGHEGGIFTVEAPIHA 76
           GD V +I G+++G+ G I ++ +  + VIV+  NL  KH+K + +G  G I  +E PIH+
Sbjct: 74  GDTVQVISGRERGKVGEITKIFKHNSTVIVKDLNLKTKHVKSREEGEPGQIIKIEGPIHS 133

Query: 77  SNVQVRDPVTGNPCKIGIKYL 97
           SNV     +     K+ I+YL
Sbjct: 134 SNVM----LYSKDQKVAIRYL 150