Miyakogusa Predicted Gene
- Lj1g3v3025180.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3025180.1 Non Chatacterized Hit- tr|J3LQP0|J3LQP0_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G3,32.12,1e-18,seg,NULL; Bromodomain transcription factors and
PHD do,Bromodomain transcription factor; Bromo_TP,Br,CUFF.29931.1
(381 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g27180.1 607 e-174
Glyma18g50380.1 606 e-173
Glyma13g20660.1 205 6e-53
Glyma10g06460.1 191 1e-48
Glyma11g35140.1 110 2e-24
Glyma14g39000.1 96 9e-20
Glyma02g40680.1 92 8e-19
Glyma03g38700.1 71 2e-12
Glyma12g34850.1 71 2e-12
Glyma13g00220.1 65 1e-10
>Glyma08g27180.1
Length = 381
Score = 607 bits (1564), Expect = e-174, Method: Compositional matrix adjust.
Identities = 300/383 (78%), Positives = 322/383 (84%), Gaps = 4/383 (1%)
Query: 1 MSNGGGKTGRQLEQPAATWRRRTVGGGDDFXXXXXXXXXXXXCESEGFPAFQQSALDALS 60
MSNGGGKTGRQLEQP TW RR VGGGDD+ CESEGF AFQQSAL+ALS
Sbjct: 1 MSNGGGKTGRQLEQPG-TWGRRKVGGGDDYARAIAKIAVAQVCESEGFQAFQQSALEALS 59
Query: 61 DITARFILNVGKSAHSFANLAGRSECNVFDVIQGLEDMGSAHGFGGASDVDHCLESSGVV 120
D+ AR+ILNVGKSAH ANL+GR+EC+ FDVIQGLEDMGS GF GASDVDHCLESSGV+
Sbjct: 60 DVVARYILNVGKSAHCHANLSGRTECHAFDVIQGLEDMGSVQGFAGASDVDHCLESSGVI 119
Query: 121 REIYQFVNEGEPITFAHPIPRFPVVKERVLPPSFLLKGEEPPGEHIPAWLPAFPVPQTYS 180
REI FVN+ EP+ FAHPIP+FPVVKERV PSFL KGEEPPGEHIPAWLPAFP QTYS
Sbjct: 120 REIVHFVNDAEPVMFAHPIPQFPVVKERVPNPSFLQKGEEPPGEHIPAWLPAFPDLQTYS 179
Query: 181 ESPLGNGRGTEPCASKFDQERENGNGERPLL--QQQMVSNMFEKSTVTDPADAKAKRVAT 238
ESP+ NGRGTEP A KFDQERENG GE P + QQQMVSNMFEKS + DPADAKAKRVA
Sbjct: 180 ESPVVNGRGTEPRAVKFDQERENGKGEWPAMNFQQQMVSNMFEKSALIDPADAKAKRVAA 239
Query: 239 ESNPFFAAPLKFEEKEVASVAPPTKLFNGVVASDNPVVENFVKNDSVSVLETFAPAIEAM 298
E NPF AAPLK E+KEVASV PP KLFN VA DNPVVENFV+N+ +S +ETFAPAIEAM
Sbjct: 240 EGNPFLAAPLKIEDKEVASVPPPAKLFND-VALDNPVVENFVENEPISAMETFAPAIEAM 298
Query: 299 KSTCCDSKEDQTHFPVNEKPTVRFKVGIKNKFLGRSVGLIPQKEEHKKTLPWFAMEDEKD 358
KSTCCDS EDQT F NEKPTVRFK+GIKNK LG+S+GLIPQKEEHK TLPWFAMED KD
Sbjct: 299 KSTCCDSNEDQTKFRANEKPTVRFKIGIKNKLLGKSIGLIPQKEEHKNTLPWFAMEDGKD 358
Query: 359 DRKRRAEKILRESLENPDQLVQL 381
DRKRRAEKILRESLENPDQLVQL
Sbjct: 359 DRKRRAEKILRESLENPDQLVQL 381
>Glyma18g50380.1
Length = 381
Score = 606 bits (1562), Expect = e-173, Method: Compositional matrix adjust.
Identities = 300/383 (78%), Positives = 320/383 (83%), Gaps = 4/383 (1%)
Query: 1 MSNGGGKTGRQLEQPAATWRRRTVGGGDDFXXXXXXXXXXXXCESEGFPAFQQSALDALS 60
MSNGGGKTGRQLEQP TWRRR VGGGDD+ CE EGF AFQQSAL+ALS
Sbjct: 1 MSNGGGKTGRQLEQPG-TWRRRKVGGGDDYARAIAKIAVAQVCEGEGFQAFQQSALEALS 59
Query: 61 DITARFILNVGKSAHSFANLAGRSECNVFDVIQGLEDMGSAHGFGGASDVDHCLESSGVV 120
D+ R+ILNVGKSAH ANL+GR+ECN FDVIQGLEDMGS GF GA+DVDHCLESSGV+
Sbjct: 60 DVVVRYILNVGKSAHCHANLSGRTECNAFDVIQGLEDMGSVQGFAGAADVDHCLESSGVI 119
Query: 121 REIYQFVNEGEPITFAHPIPRFPVVKERVLPPSFLLKGEEPPGEHIPAWLPAFPVPQTYS 180
REI FVN+ EP+ FAHPIPRFPVVKERV PSFL KGEEPPGEHIPAWLPAFP PQTYS
Sbjct: 120 REIVHFVNDAEPVMFAHPIPRFPVVKERVPNPSFLQKGEEPPGEHIPAWLPAFPDPQTYS 179
Query: 181 ESPLGNGRGTEPCASKFDQERENGNGERPL--LQQQMVSNMFEKSTVTDPADAKAKRVAT 238
+SP NGRGTEP A KFDQERE+G GE P LQQQMVSNMFEKS DPADAKAKRVA
Sbjct: 180 QSPAVNGRGTEPRAVKFDQERESGKGEWPALNLQQQMVSNMFEKSASIDPADAKAKRVAA 239
Query: 239 ESNPFFAAPLKFEEKEVASVAPPTKLFNGVVASDNPVVENFVKNDSVSVLETFAPAIEAM 298
E NPF AAPLK E+KEVASV PP KLFN A DNPVVEN V+N+ +S LETFAPAIEAM
Sbjct: 240 EGNPFLAAPLKIEDKEVASVPPPAKLFND-EALDNPVVENLVENEPISALETFAPAIEAM 298
Query: 299 KSTCCDSKEDQTHFPVNEKPTVRFKVGIKNKFLGRSVGLIPQKEEHKKTLPWFAMEDEKD 358
KST CDSKEDQT F NEKPTVRFK+GIKNK LG+S+GLIPQKEEH+KTLPWFAMEDEKD
Sbjct: 299 KSTICDSKEDQTKFCANEKPTVRFKIGIKNKLLGKSIGLIPQKEEHEKTLPWFAMEDEKD 358
Query: 359 DRKRRAEKILRESLENPDQLVQL 381
DRKRRAEKILRESLENPDQLVQL
Sbjct: 359 DRKRRAEKILRESLENPDQLVQL 381
>Glyma13g20660.1
Length = 354
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 138/363 (38%), Positives = 191/363 (52%), Gaps = 28/363 (7%)
Query: 28 DDFXXXXXXXXXXXXCESEGFPAFQQSALDALSDITARFILNVGKSAHSFANLAGRSECN 87
DDF C++ GF SALDA +D+ R++L+ G++A S AN AGRS+C
Sbjct: 11 DDFGRAAARLAVAQLCDAAGFQGATASALDAFTDVAVRYLLDQGRTAESHANHAGRSQCT 70
Query: 88 VFDVIQGLEDMGSAHGFGGASDVDHCLESSGVVREIYQFVNEGEPITFAHPIPRFPVVKE 147
VFD I+G+ED+ + F GA+ S G +REI FV + I FA PIP FPVV+E
Sbjct: 71 VFDAIRGMEDLEAPRAFSGAA-------SGGGIREIISFVESADEIPFAQPIPNFPVVQE 123
Query: 148 -RVLPPSFLLKGEEPPGEHIPAWLPAFPVPQTYSESPLGNGRGTEPCASKFDQERENGNG 206
R + PSF GE PP +HIPAWLPA P P TY +P+ + R ++P K +Q R+
Sbjct: 124 RRRIIPSFDQMGEAPPAKHIPAWLPALPDPHTYIHTPVWDERISDPREDKIEQARQRRKA 183
Query: 207 ERPLLQQQMVSNMFEKSTVTDPADAKAKRVATESNPFFAAPLKFEEKEVASVAPPTKLFN 266
ER LL Q + S +A A T S+P AA + + V
Sbjct: 184 ERSLLSLQKRLLLRNGSV-----EASA---ITSSSPNSAA---LDPQVVGEDDKVVDKDV 232
Query: 267 GVVASDNPVVENFVKNDS--VSVLETFAPAIEAMKS-TCCD-----SKEDQTHFPVNEKP 318
V + + E D VSVLE F PAIE + S CD +++++ PV +P
Sbjct: 233 EKVVKVSVLEEAGGDGDGKRVSVLEAFGPAIEMLGSGGLCDEDDGLGEKEKSELPVV-RP 291
Query: 319 TVRFKVGIKNKFLGRSVGLIPQKEEHKKTLPWFAMEDEKDDRKRRAEKILRESLENPDQL 378
TV FK K +G S+ + +K++ T EDE+DD+KRRAE IL++S+ENP +L
Sbjct: 292 TVHFKFRTGKKLIGESLDMRIRKKDASPTAVLAGREDERDDKKRRAEYILKQSMENPQEL 351
Query: 379 VQL 381
L
Sbjct: 352 TLL 354
>Glyma10g06460.1
Length = 356
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 187/365 (51%), Gaps = 30/365 (8%)
Query: 28 DDFXXXXXXXXXXXXCESEGFPAFQQSALDALSDITARFILNVGKSAHSFANLAGRSECN 87
DDF C++ GF SALDA +D+ R++L++G++A S AN AGR++C
Sbjct: 11 DDFGRAAARLAVAQLCDAAGFHGATASALDAFADVAVRYLLDLGRTAESHANHAGRTQCT 70
Query: 88 VFDVIQGLEDMGSAHGFGGASDVDHCLESSGVVREIYQFV-NEGEPITFAHPIPRFPVVK 146
VFD I+G+ED+ + F GA G +REI FV + + I FA I FPVV+
Sbjct: 71 VFDAIRGMEDLEAPRAFAGA----------GGIREIINFVESAADEIPFAQSISNFPVVQ 120
Query: 147 E-RVLPPSFLLKGEEPPGEHIPAWLPAFPVPQTYSESPLGNGRGTEPCASKFDQERENGN 205
E R + PSF GE PP +HIPAWLPA P TY +P+ + R ++P K +Q R+
Sbjct: 121 ERRRIIPSFDQMGEAPPAKHIPAWLPALPDSHTYIHTPVWDERVSDPREDKIEQARQRRK 180
Query: 206 GERPLLQQQMVSNMFEKSTVTDPADAKAKRVATESNPFFAA--PLKFEEKEVASVAPPTK 263
ER LL Q + S + + T ++P AA P + + V +
Sbjct: 181 AERSLLSLQKRLLLRNGSVES--------KATTSASPNSAALDPQVVGDDDDKVVEKDVE 232
Query: 264 LFNGVVASDNPVVENFVKNDSVSVLETFAPAIEAMKS-TCCDSKED------QTHFPVNE 316
V D+ VSVLE F PAI+ + S CD +D ++ PV
Sbjct: 233 KVVKVSVLDDDGGGAGGDGKRVSVLEAFGPAIKMLGSGGLCDEDDDGLGEKEKSELPVV- 291
Query: 317 KPTVRFKVGIKNKFLGRSVGLIPQKEEHKKTLPWFAMEDEKDDRKRRAEKILRESLENPD 376
+PTV FK K +G S+ + +K++ +T EDE+DD+KRRAE IL++S+ENP
Sbjct: 292 RPTVHFKFKTGKKLIGESLDMRNRKKDALRTAALAGREDERDDKKRRAEYILKQSMENPQ 351
Query: 377 QLVQL 381
+L L
Sbjct: 352 ELTLL 356
>Glyma11g35140.1
Length = 123
Score = 110 bits (276), Expect = 2e-24, Method: Composition-based stats.
Identities = 60/132 (45%), Positives = 80/132 (60%), Gaps = 12/132 (9%)
Query: 43 CESEGFPAFQQSALDALSDITARFILNVGKSAHSFANLAGRSECNVFDVIQGLEDMGSAH 102
C++ GF SALDA +DI R++L++G++A S AN GR++C VFD I G+ED S
Sbjct: 2 CDAAGFHGATASALDAFADIAIRYLLDLGRTAESHANHTGRTQCTVFDAIHGMEDFESPR 61
Query: 103 GFGGASDVDHCLESSGVVREIYQFV-NEGEPITFAHPIPRFPVVKERV-LPPSFLLKGEE 160
F GAS +REI FV + + I+FA PI F +V+ER + PSF GE
Sbjct: 62 AFIGASG----------IREIINFVESAADEISFAQPISNFSIVQERRHIIPSFDQMGEA 111
Query: 161 PPGEHIPAWLPA 172
P +HIPAWLPA
Sbjct: 112 PLAKHIPAWLPA 123
>Glyma14g39000.1
Length = 256
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 75/133 (56%), Gaps = 2/133 (1%)
Query: 43 CESEGFPAFQQSALDALSDITARFILNVGKSAHSFANLAGRSECNVFDVIQGLEDMGSAH 102
C+S G+ + AL+AL++++ R++ + +SA SFAN + R++ N+FD+I G+ D+ S
Sbjct: 51 CQSVGYKISKHHALEALTNVSTRYMEAIVRSASSFANASNRTDSNLFDLINGIHDLCSVL 110
Query: 103 GFGGASDVDHC-LESSGVVREIYQFVNEGEPITFAHPIPRFPVVKERVLPPSFLLKGEEP 161
GF G S + L S ++EI FVN I FA PIP F V E + + +
Sbjct: 111 GFPGGSMIHKSNLLGSSALKEIMNFVNLSNKIPFAKPIP-FRNVSEVTIDSGTSMCLSKQ 169
Query: 162 PGEHIPAWLPAFP 174
HIP WLP FP
Sbjct: 170 AKTHIPRWLPDFP 182
>Glyma02g40680.1
Length = 196
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 2/133 (1%)
Query: 43 CESEGFPAFQQSALDALSDITARFILNVGKSAHSFANLAGRSECNVFDVIQGLEDMGSAH 102
C+S G+ + + +AL+AL++++ R++ + +SA +FAN + R++ N+FD+ G+ D+ S
Sbjct: 8 CQSAGYKSSKHNALEALTNVSTRYMEAIVRSAATFANASNRTDSNLFDLTNGIHDVCSVQ 67
Query: 103 GFGGASDVDHC-LESSGVVREIYQFVNEGEPITFAHPIPRFPVVKERVLPPSFLLKGEEP 161
GF G S + L S ++EI FVN + FA PIP F V E + + +
Sbjct: 68 GFPGGSIIHKSNLLGSSALKEIMNFVNLSNKVPFAKPIP-FRNVSEVTIDSGTSMCLSKQ 126
Query: 162 PGEHIPAWLPAFP 174
HIP WLP FP
Sbjct: 127 VKTHIPRWLPHFP 139
>Glyma03g38700.1
Length = 94
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 11/95 (11%)
Query: 54 SALDALSDITARFILNVGKSAHSFANLAGRSECNVFDVIQGLEDMGSAHGFGGASDVDHC 113
SA+DA +++ ++L++G++ S AN AGR +C VFD I+G+ED+ + F AS
Sbjct: 10 SAIDAFANVAVHYLLDLGRTVESHANHAGRMQCTVFDAIRGMEDLEATRAFADASS---- 65
Query: 114 LESSGVVREIYQFVNE-GEPITFAHPIPRFPVVKE 147
+REI FV + I FA PI F VV+E
Sbjct: 66 ------IREIINFVESIVDEIPFAQPISNFLVVQE 94
>Glyma12g34850.1
Length = 109
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 43 CESEGFPAFQQSALDALSDITARFILNVGKSAHSFANLAGRSECNVFDVIQGLEDMGSAH 102
C+S GF F+ +AL L++++ R++ + +SA SFAN + R+ N+FD+I G+ D+ SA
Sbjct: 19 CQSVGFKTFKCNALKTLTNVSTRYLETIVRSAASFANASNRTNSNLFDIINGIHDLCSAQ 78
Query: 103 GFGGASDVDHC-LESSGVVREIYQFVN 128
GF G S + L S +++I FVN
Sbjct: 79 GFPGGSVMHKVNLLRSSALKDIMNFVN 105
>Glyma13g00220.1
Length = 116
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 14/119 (11%)
Query: 28 DDFXXXXXXXXXXXXCESEGFPAFQQSALDALSDITARFILNVGKSAHSFANLAGRSECN 87
DDF C++ F SALDA +D+ R +L++G+ A S A+ R++C
Sbjct: 11 DDFGHAAARLAVAQLCDATEFHGATASALDAFADVAVRDLLDLGRIAESHAD---RTQCT 67
Query: 88 VFDVIQGLEDMGSAHGFGGASDVDHCLESSGVVREIYQFV-NEGEPITFAHPIPRFPVV 145
VFD I+ +ED+ + F S+G +REI F + + I+FA PI F VV
Sbjct: 68 VFDTIRSMEDLEAPRAFA----------SAGGIREIINFFESAADKISFAQPISNFWVV 116