Miyakogusa Predicted Gene
- Lj1g3v3023740.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3023740.1 Non Chatacterized Hit- tr|K4B5B3|K4B5B3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,59.21,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; seg,NULL; DUF1675,Protein of unkn,CUFF.29903.1
(404 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g27010.1 292 4e-79
Glyma18g50240.1 285 5e-77
Glyma01g07390.1 153 3e-37
Glyma02g13120.1 127 2e-29
Glyma06g22210.2 105 1e-22
Glyma06g22210.3 105 1e-22
Glyma06g22210.1 105 1e-22
Glyma04g32390.1 104 2e-22
Glyma03g20380.1 88 2e-17
Glyma16g12800.1 87 2e-17
Glyma05g00350.1 72 8e-13
Glyma01g34820.1 66 7e-11
Glyma09g32660.3 63 6e-10
Glyma09g32660.1 63 6e-10
Glyma17g08690.1 58 2e-08
Glyma09g32660.2 55 1e-07
Glyma08g03960.1 53 7e-07
Glyma02g13150.1 52 1e-06
>Glyma08g27010.1
Length = 383
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 204/436 (46%), Positives = 240/436 (55%), Gaps = 85/436 (19%)
Query: 1 MAEVEDREEG-----HHISPPPTTAAQMSGFPRDLLKSFMAATNNHLQKQK--------M 47
MAEVEDR+ H+IS TT + M+ FPRDLL++FM NN+ +
Sbjct: 1 MAEVEDRDNNTRHHHHYISSTTTTQSPMNNFPRDLLRTFMGVNNNNNNNNNSNNNNHHNL 60
Query: 48 NLPGMKVEAEQRDXXXXXXXXXXXXXXXXXXXMNGRFGVDPNAAKKIKRTTSKPEFVNQA 107
+P +K+E E MNGRFGVDP A KKIKRTTS PEF A
Sbjct: 61 PMPVVKLEEEL--------------ELSLDLSMNGRFGVDPTA-KKIKRTTSIPEF---A 102
Query: 108 RNEEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLIRTCSLPXXXXXXXXXXXXLQTLR 167
++EM L+RTCSLP LQTLR
Sbjct: 103 SDKEMGFATVGCTGS--------------------LVRTCSLPTETEEEWRKRKELQTLR 142
Query: 168 RMEARRKRSEKQQRNSRRNHRGLSEEV-----AAGSDGGSNNLVEQGAGAGG-------L 215
RMEARRKRSEKQ RN + L E+ GS G +N V+QGAG G L
Sbjct: 143 RMEARRKRSEKQ-----RNMKALREQQQRVVGVVGSQG--SNPVDQGAGEYGEVAVAPPL 195
Query: 216 SRTVSLTTRVGGLGLN---DKEKGNVLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPT 272
+RTVSLTTRV GLGLN +KEK + ++L T
Sbjct: 196 ARTVSLTTRVCGLGLNGDSEKEKKSGIVLPPPSPSQGSIGSSGISEAESQQGQGT----T 251
Query: 273 PMDTTSPTGDNMLQNGELKSPATSGARVAEN-SGKIAA---VTMRTQANGHPPLQNRNKD 328
PMD SPT N+L + ELKSPA VAEN +GK AA VTMR+Q+N H P Q+R KD
Sbjct: 252 PMDVRSPTSANLLPDSELKSPAG----VAENNTGKNAAAAVVTMRSQSNKHSPPQSRTKD 307
Query: 329 TVKNMLEDMPSVSTKGVSPNGKKIEGFLYRYSKGEEVKILCVCHGLFMTPAEFVKHAGGE 388
V+N+LEDMP VSTKG PNGK+IEGFLYRY KGEEV+I+CVCHG F+TP+EFVKHAGG
Sbjct: 308 IVRNLLEDMPCVSTKGEGPNGKRIEGFLYRYGKGEEVRIVCVCHGSFLTPSEFVKHAGGG 367
Query: 389 DVANPLKHIVVSPSFL 404
DVANPLKHIVVSPS L
Sbjct: 368 DVANPLKHIVVSPSLL 383
>Glyma18g50240.1
Length = 377
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 203/425 (47%), Positives = 233/425 (54%), Gaps = 69/425 (16%)
Query: 1 MAEVED----REEGHHISPPPTTAAQMSGFPRDLLKSFMAATNNHLQ-KQKMNLPGMKVE 55
MAEVED + HH TT M FPRDLL++F+ NN+ Q NLP V+
Sbjct: 1 MAEVEDIDNPHHDHHHYLSSSTTQPPMINFPRDLLRTFVGVNNNNNNNSQHHNLPMPVVK 60
Query: 56 AEQRDXXXXXXXXXXXXXXXXXXXMNGRFGVDPNAAKKIKRTTSKPEFVNQARNEEMXXX 115
E MNGRFGVDP AKKIKRTTS PEFV R+EEM
Sbjct: 61 LED---------EKEELELSLGLSMNGRFGVDP-TAKKIKRTTSIPEFV---RDEEMGYA 107
Query: 116 XXXXXXXXXXXXXXXXXXXXXXXXXXHLIRTCSLPXXXXXXXXXXXXLQTLRRMEARRKR 175
L+RTCSLP LQTLRR+EARRKR
Sbjct: 108 AAMGCTGS-------------------LVRTCSLPTETEEEWRKRKELQTLRRVEARRKR 148
Query: 176 SEKQQRNSRRNHRGLSEEVAAGSDGGSNNLVEQGAGAGG-----LSRTVSLTTRVGGLGL 230
SEKQ RN + L E+ S+G +N VEQGAG G L+RTVSLT RV GLGL
Sbjct: 149 SEKQ-----RNMKALREQ-QQRSEG--SNPVEQGAGGYGEVAPPLARTVSLTARVCGLGL 200
Query: 231 N------DKEKGNVLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTPMDTTSPTGDNM 284
N KEK + + L TPMD SPT N+
Sbjct: 201 NGDSEKEKKEKRSGIALPPPSPSQGSIGSSGISEAESQQGQGT----TPMDVRSPTSANL 256
Query: 285 LQNGELKSPATSGARVAEN-SGK----IAAVTMRTQANGHPPLQNRNKDTVKNMLEDMPS 339
L + ELKSPA VAEN +GK AAVTMR+Q+N + P Q+R KD V+N+LEDMP
Sbjct: 257 LPDSELKSPAG----VAENNTGKNAAAAAAVTMRSQSNKYSPPQSRTKDIVRNLLEDMPC 312
Query: 340 VSTKGVSPNGKKIEGFLYRYSKGEEVKILCVCHGLFMTPAEFVKHAGGEDVANPLKHIVV 399
VSTKG PNGK+IEGFLYRY KGEEV+I+CVCHG F+TP+EFVKHAGG DVANPLKHIVV
Sbjct: 313 VSTKGDGPNGKRIEGFLYRYGKGEEVRIVCVCHGSFLTPSEFVKHAGGGDVANPLKHIVV 372
Query: 400 SPSFL 404
SPSFL
Sbjct: 373 SPSFL 377
>Glyma01g07390.1
Length = 407
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 153/333 (45%), Gaps = 37/333 (11%)
Query: 80 MNGRFGVDPNAAKK-IKRTTSKPEFVNQARNEEMXXXXXXXXXXXXXXXXXXXXXXXXXX 138
+ GRFGVD NA KK + R++S + R ++
Sbjct: 98 LGGRFGVDKNAKKKRLLRSSSVVGTMPLFRQDDAVAPSAAAFPA---------------- 141
Query: 139 XXXHLIRTCSLPXXXXXXXXXXXXLQTLRRMEARRKRSEKQQRNSRRNHRGLSEEVAAG- 197
L+RT SLP +QTLRRMEA+R+RSEKQ R SR G EEV AG
Sbjct: 142 ----LMRTSSLPTETEEEWRRRKEMQTLRRMEAKRRRSEKQ-RGSREVFAGAGEEVEAGG 196
Query: 198 ------SDGGSNNLVEQGAGAGGLSRTVSLTTRVG-GLGLNDKEKGNVLLLXXXXXXXXX 250
+ GS+ + G G ++ V L +G G G L
Sbjct: 197 TMAMGFNKFGSSAVAVPPPGWGVPAKQVVLGDVLGKGRGFQG------LFGQPSSQGSAD 250
Query: 251 XXXXXXXXXXXXXXXXXXXXPTPMDTTSPTGDNMLQNGELKSPATSGARVAENSGKIAAV 310
+ + SP + +Q + PA SG ++ EN + +
Sbjct: 251 SQGGSSSSMSEMDSKAFLGSSSCGEAKSPVSNQSMQERSSQDPAGSGGKMNENVTRTSKA 310
Query: 311 TMRTQANG-HPPLQNRNKDTVKNMLEDMPSVSTKGVSPNGKKIEGFLYRYSKGEEVKILC 369
+ HP + + N +EDMP V TKG PNG++IEG LY+Y KGEEV+I+C
Sbjct: 311 EAENPSRKPHPAQKITGRHIGTNSMEDMPCVFTKGDGPNGRRIEGILYKYGKGEEVRIMC 370
Query: 370 VCHGLFMTPAEFVKHAGGEDVANPLKHIVVSPS 402
VCHG F++PAEFVKHAGG DVA PL+HIVV+PS
Sbjct: 371 VCHGNFLSPAEFVKHAGGGDVAYPLRHIVVNPS 403
>Glyma02g13120.1
Length = 381
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 85/136 (62%), Gaps = 14/136 (10%)
Query: 275 DTTSPTGDNMLQNGELKSPATSGARVAENSGKIAAVTMRTQANG--------HPPLQNRN 326
+ SP + Q + PA SG + EN VT ++A+ HP +
Sbjct: 248 EAKSPISNISAQEQSSQDPAGSGGKTNEN------VTRTSKADQGENPSRKHHPSQKTMG 301
Query: 327 KDTVKNMLEDMPSVSTKGVSPNGKKIEGFLYRYSKGEEVKILCVCHGLFMTPAEFVKHAG 386
+ N +EDMP V TKG PNG++IEG LY+Y KGEEV+I+CVCHG F++PAEFVKHAG
Sbjct: 302 RHIGTNSMEDMPCVFTKGDGPNGRRIEGILYKYGKGEEVRIMCVCHGNFLSPAEFVKHAG 361
Query: 387 GEDVANPLKHIVVSPS 402
G DVA+PL+HIVV+PS
Sbjct: 362 GGDVAHPLRHIVVNPS 377
>Glyma06g22210.2
Length = 244
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Query: 327 KDTVKNMLEDMPSVSTKGVSPNGKKIEGFLYRYSKGEEVKILCVCHGLFMTPAEFVKHAG 386
K V +L MPSV+T G PNGK+IEGFLY+Y G+ V I+CVCHG F+TPAEFV HAG
Sbjct: 168 KGDVMEILRQMPSVTTTGDGPNGKRIEGFLYKYRSGQ-VCIVCVCHGNFLTPAEFVMHAG 226
Query: 387 GEDVANPLKHI-VVSPSF 403
G++VANP+KHI V+S SF
Sbjct: 227 GKEVANPMKHITVLSNSF 244
>Glyma06g22210.3
Length = 249
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Query: 327 KDTVKNMLEDMPSVSTKGVSPNGKKIEGFLYRYSKGEEVKILCVCHGLFMTPAEFVKHAG 386
K V +L MPSV+T G PNGK+IEGFLY+Y G+ V I+CVCHG F+TPAEFV HAG
Sbjct: 173 KGDVMEILRQMPSVTTTGDGPNGKRIEGFLYKYRSGQ-VCIVCVCHGNFLTPAEFVMHAG 231
Query: 387 GEDVANPLKHI-VVSPSF 403
G++VANP+KHI V+S SF
Sbjct: 232 GKEVANPMKHITVLSNSF 249
>Glyma06g22210.1
Length = 249
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Query: 327 KDTVKNMLEDMPSVSTKGVSPNGKKIEGFLYRYSKGEEVKILCVCHGLFMTPAEFVKHAG 386
K V +L MPSV+T G PNGK+IEGFLY+Y G+ V I+CVCHG F+TPAEFV HAG
Sbjct: 173 KGDVMEILRQMPSVTTTGDGPNGKRIEGFLYKYRSGQ-VCIVCVCHGNFLTPAEFVMHAG 231
Query: 387 GEDVANPLKHI-VVSPSF 403
G++VANP+KHI V+S SF
Sbjct: 232 GKEVANPMKHITVLSNSF 249
>Glyma04g32390.1
Length = 247
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Query: 327 KDTVKNMLEDMPSVSTKGVSPNGKKIEGFLYRYSKGEEVKILCVCHGLFMTPAEFVKHAG 386
K V +L MPSV+T G PNGK+IEGFLY+Y G+ V I+CVCHG F+TPAEFV HAG
Sbjct: 171 KGDVMEILRRMPSVTTTGDGPNGKRIEGFLYKYRSGQ-VCIVCVCHGNFLTPAEFVMHAG 229
Query: 387 GEDVANPLKHI-VVSPSF 403
G++VANP+KHI V+S SF
Sbjct: 230 GKEVANPMKHITVLSNSF 247
>Glyma03g20380.1
Length = 354
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 56/95 (58%), Gaps = 16/95 (16%)
Query: 321 PLQNRNKDTVKNM-------------LEDMPSVSTKGVSPNGKKIEGFLYRYSKGEEVKI 367
PL N N V+ M L MP V TKG NG+ + GFLYRY+K E V I
Sbjct: 260 PLSNENITKVEIMGKTPKPLSQTSSSLPQMPYVFTKG--DNGRTVNGFLYRYTKSE-VSI 316
Query: 368 LCVCHGLFMTPAEFVKHAGGEDVANPLKHIVVSPS 402
+CVCHG +PAEFV+HAGG D +PL+HI V PS
Sbjct: 317 VCVCHGSTFSPAEFVQHAGGTDTTHPLRHITVIPS 351
>Glyma16g12800.1
Length = 385
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 56/96 (58%), Gaps = 16/96 (16%)
Query: 321 PLQNRNKDTVKNM-------------LEDMPSVSTKGVSPNGKKIEGFLYRYSKGEEVKI 367
PL N N V+ M L MP VSTKG NG+ + GFLYRY+K E V I
Sbjct: 256 PLSNENLTKVEIMGKPPKPLSHTSYSLPPMPYVSTKG--DNGRTVNGFLYRYTKSE-VSI 312
Query: 368 LCVCHGLFMTPAEFVKHAGGEDVANPLKHIVVSPSF 403
+CVCHG +PAEFV+HAGG D +PL+ I V PS
Sbjct: 313 ICVCHGSTFSPAEFVQHAGGTDTTHPLRQITVIPSL 348
>Glyma05g00350.1
Length = 95
Score = 72.4 bits (176), Expect = 8e-13, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 332 NMLEDMPSVSTKGVSPNGKKIEGFLYRYSKGEEVKILCVCHGLFMTPAEFVKHAGGEDVA 391
+++ MP V T G GK+ EG LY+Y +G+ V I+CVCHG F++P EFV HAGG++VA
Sbjct: 30 DIVRQMPCVITTGGGTTGKRTEGLLYKYKRGQ-VCIVCVCHGSFLSPTEFVMHAGGKEVA 88
Query: 392 NPLKHI 397
+P+KHI
Sbjct: 89 DPMKHI 94
>Glyma01g34820.1
Length = 495
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 336 DMPSVSTKGVSPNGKKIEGFLYRYSKGEEVKILCVCHGLFMTPAEFVKHAGGEDVA 391
++P VST G PNG+ I G Y+YS +V+I+C CHG MTP EFV+HA + A
Sbjct: 420 NLPWVSTSGSGPNGRTISGVTYKYST-NQVRIVCACHGSHMTPEEFVRHANEDQAA 474
>Glyma09g32660.3
Length = 479
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 336 DMPSVSTKGVSPNGKKIEGFLYRYSKGEEVKILCVCHGLFMTPAEFVKHAGGEDVA 391
++P VST G PNG+ I G Y+Y +V+I+C CHG MTP EFV+H+ + A
Sbjct: 404 NLPWVSTSGSGPNGRTISGVTYKYGT-NQVRIVCACHGSHMTPEEFVRHSNEDQAA 458
>Glyma09g32660.1
Length = 479
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 336 DMPSVSTKGVSPNGKKIEGFLYRYSKGEEVKILCVCHGLFMTPAEFVKHAGGEDVA 391
++P VST G PNG+ I G Y+Y +V+I+C CHG MTP EFV+H+ + A
Sbjct: 404 NLPWVSTSGSGPNGRTISGVTYKYGT-NQVRIVCACHGSHMTPEEFVRHSNEDQAA 458
>Glyma17g08690.1
Length = 71
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 14/69 (20%)
Query: 337 MPSVSTKGVSP-NGKKIEGFLYRYSKGEEVKILCVCHGLFMTPAEFVKHAGGEDVANPLK 395
MPSV T G GK+ V I+CVCHG F +P EFV HAGG++VA+P+K
Sbjct: 1 MPSVITTGDGTITGKRT------------VCIVCVCHGSFPSPTEFVMHAGGKEVADPMK 48
Query: 396 HIVV-SPSF 403
HI V S SF
Sbjct: 49 HITVCSDSF 57
>Glyma09g32660.2
Length = 445
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 343 KGVSPNGKKIEGFLYRYSKGEEVKILCVCHGLFMTPAEFVKHAGGEDVA 391
+G PNG+ I G Y+Y +V+I+C CHG MTP EFV+H+ + A
Sbjct: 377 EGSGPNGRTISGVTYKYGT-NQVRIVCACHGSHMTPEEFVRHSNEDQAA 424
>Glyma08g03960.1
Length = 52
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 336 DMPSVSTKGVSPNGKKIEGFLYRYSKGEEVKILCVCHGLFMTPAEFVKHA 385
++P VST G P G+ I G YR++ +++I+C CHG MTP EFV+ A
Sbjct: 2 NLPWVSTTGSGPTGRTISGVTYRFNT-NQIRIVCACHGSHMTPKEFVRLA 50
>Glyma02g13150.1
Length = 36
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 334 LEDMPSVSTKGVSPNGKKIEGFLYRYSKGEEVKILC 369
+EDMP V TKG NG++IEG LY+Y K EEV+I+C
Sbjct: 1 MEDMPCVFTKGDGLNGRRIEGILYKYGKREEVRIMC 36