Miyakogusa Predicted Gene

Lj1g3v3022270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3022270.1 Non Chatacterized Hit- tr|K3XYP6|K3XYP6_SETIT
Uncharacterized protein OS=Setaria italica GN=Si007054,70.77,4e-19,
,CUFF.29886.1
         (65 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g01580.1                                                       114   2e-26
Glyma02g47170.1                                                       114   3e-26
Glyma17g06470.1                                                        87   3e-18
Glyma15g18230.1                                                        86   1e-17
Glyma09g06950.1                                                        55   2e-08

>Glyma14g01580.1 
          Length = 383

 Score =  114 bits (286), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/64 (78%), Positives = 57/64 (89%)

Query: 1  MGWLDSLFGEGRKVIKRKDSDAGEAGRALEEIRGSLHNELRTSEGAKRQQQRYCGPTVAL 60
          MGWLDS++G GRK IKRKDSDAG+AG+ALEE+R SL+NE+RTSEGAKRQQQRYCGP VAL
Sbjct: 1  MGWLDSVWGRGRKFIKRKDSDAGDAGKALEELRASLYNEIRTSEGAKRQQQRYCGPVVAL 60

Query: 61 ILGF 64
             F
Sbjct: 61 SFNF 64


>Glyma02g47170.1 
          Length = 376

 Score =  114 bits (285), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 51/64 (79%), Positives = 56/64 (87%)

Query: 1  MGWLDSLFGEGRKVIKRKDSDAGEAGRALEEIRGSLHNELRTSEGAKRQQQRYCGPTVAL 60
          MGWLDSL+  GRK IKRKDSDAG+AGRALEE+R SL+NE+RTSEGAKRQQQRYCGP VAL
Sbjct: 1  MGWLDSLWRRGRKFIKRKDSDAGDAGRALEELRASLYNEIRTSEGAKRQQQRYCGPVVAL 60

Query: 61 ILGF 64
             F
Sbjct: 61 SFNF 64


>Glyma17g06470.1 
          Length = 378

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/49 (77%), Positives = 43/49 (87%)

Query: 12 RKVIKRKDSDAGEAGRALEEIRGSLHNELRTSEGAKRQQQRYCGPTVAL 60
          RK++KRKDSDAGE GRALE++RGSL NE R+SEGAKRQQQR CGP  AL
Sbjct: 11 RKILKRKDSDAGEKGRALEDLRGSLFNEFRSSEGAKRQQQRTCGPAAAL 59


>Glyma15g18230.1 
          Length = 379

 Score = 85.5 bits (210), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/54 (66%), Positives = 44/54 (81%)

Query: 12 RKVIKRKDSDAGEAGRALEEIRGSLHNELRTSEGAKRQQQRYCGPTVALILGFF 65
          RK++KRKDSDAG+ GRALE++R SL N+ R+SEGAKRQQQR CGP +AL   F 
Sbjct: 11 RKILKRKDSDAGQKGRALEDLRASLFNQFRSSEGAKRQQQRICGPAIALSFNFL 64


>Glyma09g06950.1 
          Length = 358

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/39 (58%), Positives = 27/39 (69%)

Query: 27 RALEEIRGSLHNELRTSEGAKRQQQRYCGPTVALILGFF 65
          RALE+ R SL N+ R+SEGAK QQQ  CGP +AL   F 
Sbjct: 4  RALEDFRASLFNQFRSSEGAKHQQQHICGPAIALSFNFL 42