Miyakogusa Predicted Gene

Lj1g3v3008790.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3008790.1 Non Chatacterized Hit- tr|I3SZG2|I3SZG2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.31,0,BIOTIN,Biotin-binding site; BCCP: acetyl-CoA carboxylase,
biotin carboxyl carr,Acetyl-CoA biotin car,CUFF.29901.1
         (289 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g06080.1                                                       228   8e-60
Glyma18g50020.1                                                       210   2e-54
Glyma19g03530.1                                                       142   6e-34
Glyma09g38440.2                                                       106   2e-23
Glyma09g38440.1                                                       106   3e-23
Glyma18g47880.1                                                       103   2e-22

>Glyma13g06080.1 
          Length = 276

 Score =  228 bits (580), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 150/292 (51%), Positives = 170/292 (58%), Gaps = 22/292 (7%)

Query: 3   SSFTVPCPKCLSFTGS---GLNSRTPPPQNMQIRSGLGLKESGSFGSLSHDSAAPNGIQA 59
           +SF+VPCPKC + + S   GL S      N+  +  L LK S SFGSLS +SAA + IQ 
Sbjct: 2   ASFSVPCPKCPTTSSSPPLGLKSL-----NVSFQRVLSLKPSLSFGSLSAESAA-SRIQC 55

Query: 60  LNRKQYSVWKFQALPSEAATVGNSSNSAPVLVKEPKVASLEEKD--NGKPSGPSTSTDAS 117
           LNRKQ+SV K        AT   +SNSAPV+V  P VAS +EK+  NGK SG  T  D +
Sbjct: 56  LNRKQFSVLK--------ATKVENSNSAPVMVNGPNVASSKEKEVHNGKLSG-GTIPDDA 106

Query: 118 SISAFMNQVSDLVKLVDSKDIVELQLKQADYELMIRKKEALQPPPATFVXXXXXXXXXXX 177
           SI AFM+QVSDLVKLVDS+DIVELQLKQ+D ELMIRKKEALQ  P   +           
Sbjct: 107 SIIAFMSQVSDLVKLVDSRDIVELQLKQSDCELMIRKKEALQ--PPPVIAPTSPPMHYAT 164

Query: 178 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAGTFYRSPAPGEPPFXXX 237
                                                    MAGTFYRSPAPGEP F   
Sbjct: 165 VPSPPPPPAAAPASSAPPKAVPALPSPAKAGTSSHPTLKCPMAGTFYRSPAPGEPAFVKV 224

Query: 238 XXXXXXXXXICIIEAMKLMNEIEADKSGTIAEVLAEDGKPVSVDSPLFAIAP 289
                    ICIIEAMKLMNEIEAD+SGTIAEVLAEDGKPVSVD+PLF I P
Sbjct: 225 GDKVQKGQVICIIEAMKLMNEIEADQSGTIAEVLAEDGKPVSVDTPLFVIVP 276


>Glyma18g50020.1 
          Length = 284

 Score =  210 bits (534), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/168 (70%), Positives = 131/168 (77%), Gaps = 14/168 (8%)

Query: 3   SSFTVPCPKCL--SFTGSGLNSRTPPPQNMQIRSGLGLKESGSFGSLSHDSAAPNGIQAL 60
           +SFT+PCPKC+   F   GLNS+T      Q R+ LGLK+S SFGSLS DSA PNGIQ L
Sbjct: 2   ASFTIPCPKCVVVPFAHLGLNSQT------QQRNALGLKKSLSFGSLSSDSA-PNGIQCL 54

Query: 61  NRKQYSVWKFQALPSEAATVGNSSNSAPVLVKEPKVASLEEKD--NGKPSGPSTSTDASS 118
           N+KQ SVWK QA P EA TV    NSAPV V  PK+A  EEKD  NGKPSGPSTS DASS
Sbjct: 55  NKKQSSVWKLQAQPKEAVTV---ENSAPVQVNGPKIAPPEEKDDHNGKPSGPSTSADASS 111

Query: 119 ISAFMNQVSDLVKLVDSKDIVELQLKQADYELMIRKKEALQPPPATFV 166
           ISAFMNQVSDLV+LVDSKDI+ELQLKQA+ EL+IRKKEAL PPPATFV
Sbjct: 112 ISAFMNQVSDLVRLVDSKDIMELQLKQANCELVIRKKEALLPPPATFV 159



 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 53/71 (74%), Positives = 57/71 (80%)

Query: 219 MAGTFYRSPAPGEPPFXXXXXXXXXXXXICIIEAMKLMNEIEADKSGTIAEVLAEDGKPV 278
           MAGTFYRSPAPGEPPF            ICIIEAMKLMNEIEAD+SGT+AEV+AEDGKPV
Sbjct: 214 MAGTFYRSPAPGEPPFVKVGDKVQKGQVICIIEAMKLMNEIEADQSGTVAEVVAEDGKPV 273

Query: 279 SVDSPLFAIAP 289
           SVD+PLF I P
Sbjct: 274 SVDTPLFVIVP 284


>Glyma19g03530.1 
          Length = 280

 Score =  142 bits (357), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/164 (58%), Positives = 112/164 (68%), Gaps = 22/164 (13%)

Query: 3   SSFTVPCPKCLSFTGS-----GLNSRTPPPQNMQIRSGLGLKESGSFGSLSHDSAAPNGI 57
           +SF+VPCPKC + + S     GLNS     Q +  +SGL LK S SFGSLS +SAA + I
Sbjct: 2   ASFSVPCPKCPTTSSSSSLPLGLNS-----QKVSFQSGLILKPSLSFGSLSAESAA-SRI 55

Query: 58  QALNRKQYSVWKFQALPSEAATVGNSSNSAPVLVKEPKVASLEEK--DNGKPSGPSTSTD 115
           Q LNRKQ+SV K        AT   +SNSAPV V  P VAS +E    NGK S  +T  D
Sbjct: 56  QCLNRKQFSVLK--------ATKVENSNSAPVTVNGPTVASSKENQVHNGKLSD-TTIPD 106

Query: 116 ASSISAFMNQVSDLVKLVDSKDIVELQLKQADYELMIRKKEALQ 159
            +SI AFM+QVSDLVKLVDS+DIVELQLKQ+D ELMIRKKEALQ
Sbjct: 107 EASIIAFMSQVSDLVKLVDSRDIVELQLKQSDCELMIRKKEALQ 150



 Score =  112 bits (279), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 54/71 (76%), Positives = 55/71 (77%)

Query: 219 MAGTFYRSPAPGEPPFXXXXXXXXXXXXICIIEAMKLMNEIEADKSGTIAEVLAEDGKPV 278
           MAGTFYRSPAPGEP F            ICIIEAMKLMNEIEAD+SGTIAEVLAEDGKPV
Sbjct: 210 MAGTFYRSPAPGEPAFVKVGDKVKKGQVICIIEAMKLMNEIEADQSGTIAEVLAEDGKPV 269

Query: 279 SVDSPLFAIAP 289
           SVD PLF I P
Sbjct: 270 SVDMPLFVIVP 280


>Glyma09g38440.2 
          Length = 245

 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 49/71 (69%), Positives = 54/71 (76%)

Query: 219 MAGTFYRSPAPGEPPFXXXXXXXXXXXXICIIEAMKLMNEIEADKSGTIAEVLAEDGKPV 278
           MAGTFYRSPAPGEPPF            +CIIEAMKLMNEIEAD+SGTI E++AED K V
Sbjct: 175 MAGTFYRSPAPGEPPFVKVGDKVKKGQVVCIIEAMKLMNEIEADQSGTIVEIVAEDAKSV 234

Query: 279 SVDSPLFAIAP 289
           SVD+PLF I P
Sbjct: 235 SVDTPLFVIQP 245



 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/116 (41%), Positives = 66/116 (56%), Gaps = 13/116 (11%)

Query: 51  SAAPNGIQALNRKQYSVWKFQALP-----SEAATVGNSSNSAPVLVKEPKVASLEEKDNG 105
           S AP    A N +     +F   P     +    + +SSN+ P     P  A  +E+   
Sbjct: 4   SLAPATKAATNLRLTHSLRFSPKPNNLRFATKVALDSSSNATP-----PIKAKSKEEPPA 58

Query: 106 KP-SGPSTSTDAS--SISAFMNQVSDLVKLVDSKDIVELQLKQADYELMIRKKEAL 158
           KP + PS+S  A+  S+S F+ QV+ LVKLVDS+DIVEL+LKQ D E+ IRKKEA+
Sbjct: 59  KPLAEPSSSVLATQESVSQFITQVASLVKLVDSRDIVELKLKQHDVEVTIRKKEAM 114


>Glyma09g38440.1 
          Length = 261

 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/71 (69%), Positives = 54/71 (76%)

Query: 219 MAGTFYRSPAPGEPPFXXXXXXXXXXXXICIIEAMKLMNEIEADKSGTIAEVLAEDGKPV 278
           MAGTFYRSPAPGEPPF            +CIIEAMKLMNEIEAD+SGTI E++AED K V
Sbjct: 191 MAGTFYRSPAPGEPPFVKVGDKVKKGQVVCIIEAMKLMNEIEADQSGTIVEIVAEDAKSV 250

Query: 279 SVDSPLFAIAP 289
           SVD+PLF I P
Sbjct: 251 SVDTPLFVIQP 261



 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 8/82 (9%)

Query: 80  VGNSSNSAPVLVKEPKVASLEEKDNGKP-SGPSTSTDAS--SISAFMNQVSDLVKLVDSK 136
           + +SSN+ P     P  A  +E+   KP + PS+S  A+  S+S F+ QV+ LVKLVDS+
Sbjct: 54  LDSSSNATP-----PIKAKSKEEPPAKPLAEPSSSVLATQESVSQFITQVASLVKLVDSR 108

Query: 137 DIVELQLKQADYELMIRKKEAL 158
           DIVEL+LKQ D E+ IRKKEA+
Sbjct: 109 DIVELKLKQHDVEVTIRKKEAM 130


>Glyma18g47880.1 
          Length = 262

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 48/71 (67%), Positives = 53/71 (74%)

Query: 219 MAGTFYRSPAPGEPPFXXXXXXXXXXXXICIIEAMKLMNEIEADKSGTIAEVLAEDGKPV 278
           MAGTFYRSPAPGEP F            +CIIEAMKLMNEIEAD+SGTI E++AED K V
Sbjct: 192 MAGTFYRSPAPGEPSFVKVGDKVKKGQVVCIIEAMKLMNEIEADQSGTIVEIVAEDAKSV 251

Query: 279 SVDSPLFAIAP 289
           SVD+PLF I P
Sbjct: 252 SVDTPLFVIQP 262



 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 3/68 (4%)

Query: 94  PKVASLEEKDNGKP-SGPSTSTDAS--SISAFMNQVSDLVKLVDSKDIVELQLKQADYEL 150
           P  A  +E+   KP + PS+S  A+  S+S F+ QV+ LVKLVDS+DIVEL+LKQ D E+
Sbjct: 64  PMKAKSKEEPPAKPLAEPSSSVLATQESVSQFITQVASLVKLVDSRDIVELKLKQHDVEV 123

Query: 151 MIRKKEAL 158
            IRKKEA+
Sbjct: 124 TIRKKEAM 131