Miyakogusa Predicted Gene
- Lj1g3v3006720.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3006720.1 Non Chatacterized Hit- tr|K4B739|K4B739_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,47.73,3e-18,U1-like zinc finger,Zinc finger, U1-type; zinc
finger,Zinc finger, C2H2-like; ZINC FINGER PROTEIN-RE,CUFF.29853.1
(332 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g49990.1 244 1e-64
Glyma08g26510.1 243 2e-64
Glyma03g03930.1 49 6e-06
>Glyma18g49990.1
Length = 296
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/266 (51%), Positives = 160/266 (60%), Gaps = 19/266 (7%)
Query: 67 LNPPGVDSYAPLNSNPVSHLGYEPIPIPNPNLPYGQGHVVDSNASSLVPPSYGYYYDPNA 126
LNPPGVD PLN P+S+ +EP+P L Y Q V D ++S GY D
Sbjct: 48 LNPPGVDPQTPLN--PISYAAHEPVP----GLVYAQSLVGDDSSS-------GYCLD--- 91
Query: 127 QNWAAREAVRQYGADPSVYGAGIPIPSNGSEQLAIVXXXXXXXXXXXXXXHGNGXXXXXX 186
NW AREAVRQ+G DP++Y GI +P NGSEQLA+ H NG
Sbjct: 92 HNWVAREAVRQFGTDPTLYAPGISLPPNGSEQLAMANPSSLWWTNTTTQPHVNGTPKKNQ 151
Query: 187 XXXXXXTVQPAYCEVCKTECTSKDVLDQHKLGKRHKKNLEKLRESLKPAQVHPSGSSNPV 246
VQPA+CEVCK ECT K+VLDQHKLGK+HKKN+EKLRESL P QV PSGSS P+
Sbjct: 152 KKTK--VVQPAFCEVCKIECTGKEVLDQHKLGKKHKKNVEKLRESLTPTQVQPSGSSKPL 209
Query: 247 IGPREQNDX-XXXXXXXXXXXXIETPEDLEIKKKKVLEGGAAANAVRTCAVCNVVCNSET 305
IGP+ +D +ET EDLE KK KVL GGAAA+AV+ CA+CNVVCNSET
Sbjct: 210 IGPQLPDDKGKSISGNKSKRKKVETAEDLEKKKMKVLMGGAAASAVKICAICNVVCNSET 269
Query: 306 VYNYHIAGXXXXXXXXXXSGLRQPNA 331
VYNYH+AG SG Q NA
Sbjct: 270 VYNYHLAGQKHAAMQKKASGHTQSNA 295
>Glyma08g26510.1
Length = 302
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/264 (51%), Positives = 162/264 (61%), Gaps = 18/264 (6%)
Query: 71 GVDSYAPLNSNPVSHLGYEPIPIPNPNLPYGQGHVVDSNASSLVPPSYGYYYDPNAQNWA 130
GVD PLN P+S+ +EP+P L Y Q V D+++S GY D QNWA
Sbjct: 55 GVDPQTPLN--PISYAAHEPVPA----LIYAQRLVGDNSSS-------GYCLD---QNWA 98
Query: 131 AREAVRQYGADPSVYGAGIPIPSNGSEQLAIVXXXXXXXXXXXXXX-HGNGXXXXXXXXX 189
AR+AVRQ+G DP++Y GI +PSNGSEQLA+ H NG
Sbjct: 99 ARDAVRQFGTDPTLYAPGISLPSNGSEQLAMANPSSSLWWTNTTTLPHVNGILKKNQKKA 158
Query: 190 XXXTVQPAYCEVCKTECTSKDVLDQHKLGKRHKKNLEKLRESLKPAQVHPSGSSNPVIGP 249
VQPA+CEVCK ECTSKDVLDQHKLGK+HKKN+EKLRESL P QV PS SS P+IGP
Sbjct: 159 KTKIVQPAFCEVCKIECTSKDVLDQHKLGKKHKKNVEKLRESLTPTQVQPSVSSKPLIGP 218
Query: 250 REQNDXXXXXX-XXXXXXXIETPEDLEIKKKKVLEGGAAANAVRTCAVCNVVCNSETVYN 308
+ +D +ET EDLE KK KVLEGGAAA+AV+ CA+CNVVCNSETVYN
Sbjct: 219 QLPDDKSKSTSGNKSKRKKVETAEDLEKKKMKVLEGGAAASAVKICAICNVVCNSETVYN 278
Query: 309 YHIAGXXXXXXXXXXSGLRQPNAS 332
YH+AG SG Q +AS
Sbjct: 279 YHLAGQKHAAMLKKASGHMQSSAS 302
>Glyma03g03930.1
Length = 448
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 27/35 (77%)
Query: 199 CEVCKTECTSKDVLDQHKLGKRHKKNLEKLRESLK 233
CE+CK EC S ++L+QHK+G++H+KN+ ES +
Sbjct: 145 CEICKVECNSPEILEQHKVGRKHQKNMRVHEESQR 179