Miyakogusa Predicted Gene
- Lj1g3v2980360.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2980360.1 Non Chatacterized Hit- tr|I1LWM1|I1LWM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56077
PE,57.75,3e-18,EMP24_GP25L,GOLD,CUFF.29805.1
(100 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g05610.1 96 7e-21
Glyma19g03020.1 89 1e-18
Glyma19g03020.2 88 2e-18
Glyma18g49700.1 82 9e-17
Glyma07g35490.1 79 1e-15
Glyma20g03930.1 79 1e-15
>Glyma13g05610.1
Length = 216
Score = 96.3 bits (238), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 58/71 (81%)
Query: 1 MSNQILFLLLVSPALMCSFVDSMRFELKSNQPKCINEDIKSNALTVGKYYVVSPSEGYPV 60
MS+ + L L+S A+MCS +SMRF+L+S Q KCI+EDIK+NA++VGKY VV+P EGYP+
Sbjct: 4 MSDSVRSLALLSLAVMCSVANSMRFDLQSGQTKCISEDIKTNAMSVGKYSVVNPQEGYPL 63
Query: 61 PDSHKITLRIV 71
PDSH+I +++
Sbjct: 64 PDSHRIIVKVT 74
>Glyma19g03020.1
Length = 216
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 52/64 (81%)
Query: 8 LLLVSPALMCSFVDSMRFELKSNQPKCINEDIKSNALTVGKYYVVSPSEGYPVPDSHKIT 67
L L++ A +CS +SMRFEL+S KCI+EDIK+NA++VGKY VV+P EGYP+PDSH+I
Sbjct: 11 LALLTLAFVCSVANSMRFELQSGNTKCISEDIKTNAMSVGKYSVVNPREGYPLPDSHRIV 70
Query: 68 LRIV 71
+++
Sbjct: 71 VKVT 74
>Glyma19g03020.2
Length = 169
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 52/64 (81%)
Query: 8 LLLVSPALMCSFVDSMRFELKSNQPKCINEDIKSNALTVGKYYVVSPSEGYPVPDSHKIT 67
L L++ A +CS +SMRFEL+S KCI+EDIK+NA++VGKY VV+P EGYP+PDSH+I
Sbjct: 11 LALLTLAFVCSVANSMRFELQSGNTKCISEDIKTNAMSVGKYSVVNPREGYPLPDSHRIV 70
Query: 68 LRIV 71
+++
Sbjct: 71 VKVT 74
>Glyma18g49700.1
Length = 241
Score = 82.4 bits (202), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Query: 16 MCSFVDSMRFELKSNQPKCINEDIKSNALTVGKYYVVSP-SEGYPVPDSHKITLRI 70
M S V+SM+FELKS Q KCI+ED+KSN +TVG YYV++P ++G+P+PDSHKIT+R+
Sbjct: 1 MASIVNSMQFELKSGQSKCISEDLKSNVITVGNYYVLNPNNDGFPIPDSHKITVRV 56
>Glyma07g35490.1
Length = 221
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 46/57 (80%)
Query: 15 LMCSFVDSMRFELKSNQPKCINEDIKSNALTVGKYYVVSPSEGYPVPDSHKITLRIV 71
L S +S+RFEL+S KCI+EDIKSN++TVGKY +V+ +EG P+PDSH++T+R+
Sbjct: 24 LFSSSTESLRFELQSGHTKCISEDIKSNSMTVGKYQIVNSNEGQPLPDSHRVTVRVT 80
>Glyma20g03930.1
Length = 215
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%)
Query: 20 VDSMRFELKSNQPKCINEDIKSNALTVGKYYVVSPSEGYPVPDSHKITLRIVWNLVILHL 79
+S+RFE++S KCI+EDIKSN++TVGKY +VSP+EG P+PD+H+ T+R+ + +
Sbjct: 23 TESLRFEIQSGHTKCISEDIKSNSMTVGKYQIVSPNEGQPLPDAHRFTVRVTSSYGNNYH 82
Query: 80 LQLRPVTTQLVF 91
R T Q F
Sbjct: 83 YGDRVQTGQFAF 94