Miyakogusa Predicted Gene

Lj1g3v2978140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2978140.1 Non Chatacterized Hit- tr|A9PHB0|A9PHB0_POPTR
Putative uncharacterized protein OS=Populus
trichocarp,43.8,5e-19,STRUCTURAL CONSTITUENT OF RIBOSOME,NULL; 60S
RIBOSOMAL PROTEIN L34,Ribosomal protein L34Ae; seg,NULL,CUFF.34321.1
         (220 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g49510.1                                                       277   8e-75
Glyma09g37180.1                                                       275   3e-74
Glyma13g05460.1                                                       219   2e-57
Glyma19g02700.1                                                       214   8e-56
Glyma15g11000.1                                                        79   5e-15
Glyma13g28020.1                                                        78   8e-15

>Glyma18g49510.1 
          Length = 218

 Score =  277 bits (708), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 140/220 (63%), Positives = 158/220 (71%), Gaps = 2/220 (0%)

Query: 1   MVYFDXXXXXXXXXVDQPPSMANSLDLGSKPRNRKAANSLQVPPCQRSQSXXXXXXXXXX 60
           M YF          VDQ   MANSLD   K R+RK  NSLQ PPC+RS+S          
Sbjct: 1   MAYFHSSISLCNSSVDQ--YMANSLDFEPKSRHRKTPNSLQSPPCRRSRSAVVDVVIFAA 58

Query: 61  XXXXXXXXXXPYVKAVMTESFKIGGVIMNLMREEVSGTPWIYVFIGVFVACAVFTTWLLV 120
                     PY + + +ES K G +I+NL++EEVS TPWIY+FIGV V  A  TTW+LV
Sbjct: 59  VIAAFGFLLFPYAQILASESVKFGILIVNLVKEEVSFTPWIYMFIGVSVTFAALTTWVLV 118

Query: 121 ASTTRKCGNRYCKGLKKAAEFDIQLETEDCVKNSPSLSKDGTVKKGLFKLPCEHHRELEA 180
           A T RKCGN  CKGL+KAA FDIQLETEDCVKNSPSL+KDG VKKGLFK+ C+HHRELEA
Sbjct: 119 ACTIRKCGNPNCKGLRKAATFDIQLETEDCVKNSPSLTKDGGVKKGLFKVFCDHHRELEA 178

Query: 181 ELKKMAPPNGRAVLVLRAKCGCSVGRLEVPGPRKNRKMKK 220
           ELKKMAPPNGRAVLVLR +CGCSVGRLEVPGP+KNRK KK
Sbjct: 179 ELKKMAPPNGRAVLVLRGRCGCSVGRLEVPGPKKNRKTKK 218


>Glyma09g37180.1 
          Length = 216

 Score =  275 bits (703), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 142/220 (64%), Positives = 158/220 (71%), Gaps = 4/220 (1%)

Query: 1   MVYFDXXXXXXXXXVDQPPSMANSLDLGSKPRNRKAANSLQVPPCQRSQSXXXXXXXXXX 60
           MVYF          VDQ  SMANSLD   K R+RK  N L  PPCQRS+S          
Sbjct: 1   MVYFHSSVSLCNSSVDQ--SMANSLD--PKSRHRKTPNFLPSPPCQRSRSAVVDVVIFAA 56

Query: 61  XXXXXXXXXXPYVKAVMTESFKIGGVIMNLMREEVSGTPWIYVFIGVFVACAVFTTWLLV 120
                     PY + V +ES KIG VI+NL+ EE S  PWIY+FIGV V  A  TTW+LV
Sbjct: 57  VIAAFGFLLFPYAQIVASESVKIGVVIVNLVEEEASVAPWIYMFIGVSVTFAALTTWVLV 116

Query: 121 ASTTRKCGNRYCKGLKKAAEFDIQLETEDCVKNSPSLSKDGTVKKGLFKLPCEHHRELEA 180
           A TTRKCGN  CKGL+KAAEFDIQLETEDCVKNSPSL+K G VKKGLFK+PC+HHRELEA
Sbjct: 117 ACTTRKCGNPNCKGLRKAAEFDIQLETEDCVKNSPSLTKGGGVKKGLFKVPCDHHRELEA 176

Query: 181 ELKKMAPPNGRAVLVLRAKCGCSVGRLEVPGPRKNRKMKK 220
           ELKKMAPPNGRA+LVLR +CGCSVGRLEVP P+KNRK+KK
Sbjct: 177 ELKKMAPPNGRAILVLRGRCGCSVGRLEVPRPKKNRKIKK 216


>Glyma13g05460.1 
          Length = 243

 Score =  219 bits (558), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/243 (55%), Positives = 160/243 (65%), Gaps = 24/243 (9%)

Query: 1   MVYFDXXXXXXXXXVDQPPSMANSL---DLGSKPR-------NRKA------ANSLQVPP 44
           MVYF          VDQ  SMANS+   D GSK R       NR+       +NSLQ+PP
Sbjct: 1   MVYFHSSISLCKS-VDQSSSMANSICSADFGSKSRQINHLQKNRRTPSSSSSSNSLQIPP 59

Query: 45  CQRSQSXXXXXXXXXXXXXXXXXXXXPYVKAVMTESFKIGGVIMNLMREEVSGTPWIYVF 104
           C RS+S                    PYV+ ++T+ +++  V++ L++EEVS  PWIYV 
Sbjct: 60  CDRSRSAMVDVVMFIAVVCACGFLFFPYVEFLVTKCYEVIKVVVFLIKEEVSVAPWIYVS 119

Query: 105 IGVFVACAVFTTWLLVASTTRKCGNRYCKGLKKAAEFDIQLETEDCVKNSPSLSKD---- 160
           IG+ V  A   TW +VA TTRKCGN  CKGL+KAAEFDIQLETEDCVKNS S S +    
Sbjct: 120 IGLSVVFAALATWGVVACTTRKCGNPNCKGLRKAAEFDIQLETEDCVKNSASSSSNVAKD 179

Query: 161 --GTVKKGLFKLPCEHHRELEAELKKMAPPNGRAVLVLRAKCGCSVGRLEVPGPRKN-RK 217
             G VKKGLF+LP +HHRELEAELKKMAPPNGRAVLVLRA+CGCSVGRLEVPGPRK+ RK
Sbjct: 180 GAGGVKKGLFELPRDHHRELEAELKKMAPPNGRAVLVLRARCGCSVGRLEVPGPRKHLRK 239

Query: 218 MKK 220
           + K
Sbjct: 240 INK 242


>Glyma19g02700.1 
          Length = 247

 Score =  214 bits (544), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 130/247 (52%), Positives = 156/247 (63%), Gaps = 28/247 (11%)

Query: 1   MVYFDXXXXXXXXXVDQPPSMANSL---DLGSKPR-------NRKA----------ANSL 40
           MVYF          VDQ   MANS+   D GSK R       NR+           +NSL
Sbjct: 1   MVYFHSSISLCKF-VDQSSFMANSICSADFGSKSRQINHLQKNRRTPSSSSSSSSSSNSL 59

Query: 41  QVPPCQRSQSXXXXXXXXXXXXXXXXXXXXPYVKAVMTESFKIGGVIMNLMREEVSGTPW 100
           Q+PPC RS+S                    PYV+ ++T+ +++   ++ L++EEVS  PW
Sbjct: 60  QIPPCDRSRSAMVDVVMFIAVVCACGFLFFPYVEFLVTKCYEVIKGVVFLIKEEVSVAPW 119

Query: 101 IYVFIGVFVACAVFTTWLLVASTTRKCGNRYCKGLKKAAEFDIQLETEDCVKNSPSLSKD 160
           IY+ IG+ V  A   TW +VA TTRKCGN  CKGL+KAAEFDIQLETEDCVKN  S S +
Sbjct: 120 IYISIGLSVVFAALATWAVVACTTRKCGNPSCKGLRKAAEFDIQLETEDCVKNLASASSN 179

Query: 161 ------GTVKKGLFKLPCEHHRELEAELKKMAPPNGRAVLVLRAKCGCSVGRLEVPGPRK 214
                 G  KKGLF+LP +HHRELEAELKKMAPPNGRAVLVLRA+CGCSVGRLEVPGPRK
Sbjct: 180 VAKDGGGGTKKGLFELPRDHHRELEAELKKMAPPNGRAVLVLRARCGCSVGRLEVPGPRK 239

Query: 215 N-RKMKK 220
           + RK+ K
Sbjct: 240 HLRKINK 246


>Glyma15g11000.1 
          Length = 992

 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 63/100 (63%), Gaps = 8/100 (8%)

Query: 124 TRKCGNRYCKGLKKAAEFDIQLETEDCVKNSPSLSKDGTVKKGLFKLPCEHHRE---LEA 180
           +R+C  + CKGLKKA EFD+Q++     +   S+     + K  +K   E + +   L +
Sbjct: 110 SRRCQRQGCKGLKKAMEFDLQIQ-----RFGSSVPSSAEIDKLPWKGGTEANPDYDCLRS 164

Query: 181 ELKKMAPPNGRAVLVLRAKCGCSVGRLEVPGPRKNRKMKK 220
           EL+KMAPPNGRA+L+ RA CGC V +LE  GP+K ++ K+
Sbjct: 165 ELRKMAPPNGRALLLFRAPCGCPVAKLEASGPKKAKRHKR 204


>Glyma13g28020.1 
          Length = 214

 Score = 77.8 bits (190), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 19/107 (17%)

Query: 121 ASTTRKCGNRYCKGLKKAAEFDIQLETEDCVKNSPSLSKDGTVKKGLFKLPCEHHRE--- 177
            S +R+C  + CKGLKKA EFD+Q++            + G+    + KLP +   E   
Sbjct: 106 GSRSRRCQRQGCKGLKKAMEFDLQIQ------------RFGSSSAEIDKLPWKGGTEANP 153

Query: 178 ----LEAELKKMAPPNGRAVLVLRAKCGCSVGRLEVPGPRKNRKMKK 220
               L +EL+KMAPPNGRA+L+ RA CGC V +LE  GP+K ++ K+
Sbjct: 154 DYDCLRSELRKMAPPNGRALLLFRAPCGCPVAKLEASGPKKGKRHKR 200