Miyakogusa Predicted Gene

Lj1g3v2940680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2940680.1 Non Chatacterized Hit- tr|K3YRB2|K3YRB2_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si016730,67.33,4e-19,CATIONIC AMINO ACID TRANSPORTER,Cationic amino
acid transporter; AMINO ACID TRANSPORTER,Amino acid/p,CUFF.29736.1
         (114 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g37700.1                                                        94   3e-20
Glyma18g48860.1                                                        93   7e-20

>Glyma09g37700.1 
          Length = 558

 Score = 94.0 bits (232), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 53/88 (60%), Positives = 56/88 (63%)

Query: 27  ALRSKLLVSPAEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVITGTVARDAGPGV 86
           ALRSK LVSPAEKA                               FV+TGTVARDAGPGV
Sbjct: 20  ALRSKRLVSPAEKAARDSSDLGLSRRLGVLDLVLLGIGASIGAGIFVVTGTVARDAGPGV 79

Query: 87  TISFILAGASCVINALCFAELASRFPAV 114
           TISFILAGASCVINALC+AELA+RFPAV
Sbjct: 80  TISFILAGASCVINALCYAELATRFPAV 107


>Glyma18g48860.1 
          Length = 519

 Score = 92.8 bits (229), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 52/88 (59%), Positives = 56/88 (63%)

Query: 27  ALRSKLLVSPAEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVITGTVARDAGPGV 86
           ALRSK L+SPAEKA                               FV+TGTVARDAGPGV
Sbjct: 22  ALRSKRLMSPAEKAARESSDLGLSRRLGVLDLVLLGIGASIGAGIFVVTGTVARDAGPGV 81

Query: 87  TISFILAGASCVINALCFAELASRFPAV 114
           TISFILAGASCVINALC+AELA+RFPAV
Sbjct: 82  TISFILAGASCVINALCYAELATRFPAV 109