Miyakogusa Predicted Gene

Lj1g3v2939610.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2939610.1 tr|E9JRK5|E9JRK5_SETIT Ubiquitin-protein ligase
(Fragment) OS=Setaria italica PE=4
SV=1,79.07,0.000000001,seg,NULL,CUFF.29716.1
         (178 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g48840.1                                                       210   6e-55
Glyma09g37720.1                                                       209   2e-54

>Glyma18g48840.1 
          Length = 680

 Score =  210 bits (535), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 112/177 (63%), Positives = 121/177 (68%), Gaps = 1/177 (0%)

Query: 1   MARFMAALALSYMFDGRMDEFALAGLMSESISKIAASLDGARKMALKHIETFVHMFXXXX 60
           MARFMAALAL+YMFDGRMDE+AL G  S      + SLDGAR+MALKHIE FV MF    
Sbjct: 503 MARFMAALALAYMFDGRMDEYALVG-TSSESISKSVSLDGARRMALKHIEAFVLMFSDPQ 561

Query: 61  XXXXXXXXXXXXXXXXVTDGARIQEAGHLRCSGSEIGRFVTMLRNPSPILKSCAAFALLQ 120
                           VT+GA IQEAGHLRCSG+EIGRF+TMLRNPS ILK+CAAFALLQ
Sbjct: 562 AFAAAAASSAPAALAQVTEGACIQEAGHLRCSGAEIGRFITMLRNPSSILKACAAFALLQ 621

Query: 121 FTIPGGRHAGHHASLMQNXXXXXXXXXXXXXXXXXXXXKIFARIVLRNLEYHQIEHT 177
           FTIPGGRHA HHASLMQ+                    KIFARIVLRNLEYHQIE T
Sbjct: 622 FTIPGGRHAMHHASLMQSLGAPRVLRGAAAAATAPLEAKIFARIVLRNLEYHQIEQT 678


>Glyma09g37720.1 
          Length = 921

 Score =  209 bits (531), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 110/176 (62%), Positives = 121/176 (68%), Gaps = 1/176 (0%)

Query: 1   MARFMAALALSYMFDGRMDEFALAGLMSESISKIAASLDGARKMALKHIETFVHMFXXXX 60
           MARFM+ALAL+YMFDGRMDE+AL  + S      + SLDGAR+MALKHIE FV MF    
Sbjct: 744 MARFMSALALAYMFDGRMDEYALV-VTSSESISKSVSLDGARRMALKHIEAFVLMFSDLQ 802

Query: 61  XXXXXXXXXXXXXXXXVTDGARIQEAGHLRCSGSEIGRFVTMLRNPSPILKSCAAFALLQ 120
                           VT+GARIQEAGHLRCSG+EIGRF+TMLRNPS ILK+CAAFALLQ
Sbjct: 803 AFAAAAASSAPAALAQVTEGARIQEAGHLRCSGAEIGRFITMLRNPSSILKACAAFALLQ 862

Query: 121 FTIPGGRHAGHHASLMQNXXXXXXXXXXXXXXXXXXXXKIFARIVLRNLEYHQIEH 176
           FTIPGGRHA HHASLMQ+                    KIFARIVLRNLEYHQIE 
Sbjct: 863 FTIPGGRHAMHHASLMQSLGASRVLRGAAAAATAPLEAKIFARIVLRNLEYHQIEQ 918