Miyakogusa Predicted Gene

Lj1g3v2927320.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2927320.2 tr|B9MVA0|B9MVA0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_591787 PE=4
SV=1,42.37,0.000000000000001,UPF0565,Uncharacterised protein family
UPF0565,CUFF.29704.2
         (327 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g25700.1                                                       552   e-157
Glyma17g13630.1                                                        97   2e-20
Glyma08g43910.1                                                        66   6e-11
Glyma15g35770.1                                                        62   6e-10

>Glyma13g25700.1 
          Length = 327

 Score =  552 bits (1423), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 272/327 (83%), Positives = 286/327 (87%)

Query: 1   MERWSGVLRVPLHPNSKAFHRVGASLCLSPETGTLSVPIANAIFFCGDRVEGTGNPVIER 60
           MERWSGVLRVPLHPNS+ FHRVGASLCLSPET TL VP ANAIFFCGDRVEGTGNPVIER
Sbjct: 1   MERWSGVLRVPLHPNSRTFHRVGASLCLSPETRTLLVPKANAIFFCGDRVEGTGNPVIER 60

Query: 61  LSDLQKLSEIVVSKFGSFINAWVIESSVYKGPFAVYKDFIPSVNQYGEPSSYHPIGFPAS 120
           LS+LQKLSEI+VSKFGSF NAWVIE+S + GPFAVYKDFIPSVNQYGEPSSYHP GFPAS
Sbjct: 61  LSNLQKLSEIIVSKFGSFTNAWVIEASAFNGPFAVYKDFIPSVNQYGEPSSYHPNGFPAS 120

Query: 121 TSTVSLLSNCLEEVKKVILGKQVDTKFVHTPSCCSSQPKTFILGFSKGGTVLNQIVTELG 180
           TSTVSLLSNCLEE KKVILG QVDTK   +PSC  S+ KTFILGFSKGG VLNQIVTELG
Sbjct: 121 TSTVSLLSNCLEEAKKVILGTQVDTKSGLSPSCSFSRSKTFILGFSKGGAVLNQIVTELG 180

Query: 181 FSDIGSNPYPLDAGQPMDRKISRSEEIYVVPKTKEGLLNSISEIHYVDVGLNSTGAYLTN 240
           FSDIGSN    D GQ M RK + SEEIYVVPKTKE LLNSISEIHYVDVGLNS GAYLTN
Sbjct: 181 FSDIGSNANSPDVGQLMGRKFAGSEEIYVVPKTKEDLLNSISEIHYVDVGLNSAGAYLTN 240

Query: 241 LEVFEGISKRLIQGAPKLRFILHGTPRQWGDKRRDWIRKEKDGMLHLLESEACKSGGKLQ 300
            +VFE ISKRL+QGA +LRFILHGTPRQW DKRRDWIR EKD ML LLESEA KSGGKL+
Sbjct: 241 HDVFERISKRLMQGASELRFILHGTPRQWSDKRRDWIRNEKDKMLRLLESEAPKSGGKLK 300

Query: 301 VFARYYFADKPSNMQMHFEIIESLDVS 327
           V  R+YF DKP +MQMHFEIIESLD S
Sbjct: 301 VLERFYFTDKPPSMQMHFEIIESLDAS 327


>Glyma17g13630.1 
          Length = 72

 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/65 (76%), Positives = 52/65 (80%)

Query: 159 KTFILGFSKGGTVLNQIVTELGFSDIGSNPYPLDAGQPMDRKISRSEEIYVVPKTKEGLL 218
           KTFILGF KGGTVLNQIVTELGFSDIG N      G P DRK S SEEIY VP+TKEGLL
Sbjct: 1   KTFILGFRKGGTVLNQIVTELGFSDIGFNVNSPGVGHPKDRKFSSSEEIYAVPETKEGLL 60

Query: 219 NSISE 223
           N+ISE
Sbjct: 61  NNISE 65


>Glyma08g43910.1 
          Length = 41

 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/41 (75%), Positives = 35/41 (85%)

Query: 60  RLSDLQKLSEIVVSKFGSFINAWVIESSVYKGPFAVYKDFI 100
           RLS+LQKLSEI +S  GSFINAWV E+SV+  PFAVYKDFI
Sbjct: 1   RLSNLQKLSEIGLSNLGSFINAWVTEASVFNEPFAVYKDFI 41


>Glyma15g35770.1 
          Length = 60

 Score = 62.4 bits (150), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/37 (75%), Positives = 30/37 (81%)

Query: 74  KFGSFINAWVIESSVYKGPFAVYKDFIPSVNQYGEPS 110
           KFGSF  AWV E+SV+ G FAVYKDFI SVNQYGE S
Sbjct: 1   KFGSFTIAWVFEASVFNGTFAVYKDFIASVNQYGELS 37