Miyakogusa Predicted Gene
- Lj1g3v2923020.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2923020.1 Non Chatacterized Hit- tr|I3STC5|I3STC5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.19,0,seg,NULL;
HABP4_PAI-RBP1,Hyaluronan/mRNA-binding protein; Stm1_N,Stm1,
N-terminal; NUCLEAR RNA BINDI,CUFF.30385.1
(370 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g37850.1 316 2e-86
Glyma18g48620.1 306 2e-83
Glyma03g26100.1 286 3e-77
Glyma07g13900.1 271 6e-73
Glyma20g39080.1 234 8e-62
Glyma18g49190.1 171 1e-42
Glyma02g12800.1 129 4e-30
Glyma09g24870.1 120 2e-27
Glyma03g10930.1 114 2e-25
Glyma06g41840.1 70 3e-12
Glyma04g27090.1 69 9e-12
Glyma03g11720.1 68 1e-11
Glyma06g31610.1 65 2e-10
Glyma03g08150.1 53 4e-07
>Glyma09g37850.1
Length = 367
Score = 316 bits (810), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 194/373 (52%), Positives = 207/373 (55%), Gaps = 9/373 (2%)
Query: 1 MATMNPFDLLGDDAEDPSQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPSKPL 60
MAT NPFDLLGDDAEDPSQLI +PSKPL
Sbjct: 1 MATTNPFDLLGDDAEDPSQLI---AAEQLKAAAAAAAATAAPKKAPAQQIKPAQLPSKPL 57
Query: 61 PPAQAVRDARNEPSXXXXXXXXXXXXXXXXXXXXNRDFSNDENSFPASGAPDNLGPFEGD 120
PPAQAVRDARNE +RD SNDENSFP SGAP N FEGD
Sbjct: 58 PPAQAVRDARNESVRGGRGGGRGGGRGFGRGRGFSRDSSNDENSFPTSGAPYNQVSFEGD 117
Query: 121 SEKASEXXXXXXXXXXXXXXXXXXXXXFSNGEAD--EEGRPRRAFERHSGTGRGSGFKRE 178
+ K+SE FSNGE EEGRPRRAF+R SGTGRG+ FKRE
Sbjct: 118 AGKSSE-RRGYGGPRGPYRGGGGRRGGFSNGETGEAEEGRPRRAFDRRSGTGRGNEFKRE 176
Query: 179 GAGRGNWGTQSDEIAQVTDEVANETEKNLSDEKPAV-EDVADGXXXXXXXXXXXXXXXXX 237
G+GRGNWG Q+DE+AQVTDEVANETEKNL DEKPAV EDVADG
Sbjct: 177 GSGRGNWGAQTDELAQVTDEVANETEKNLGDEKPAVEEDVADGNKDSPTNETEEKEPEDK 236
Query: 238 XXXXXXYEKVLEEKRKALQAQKTEGRKVDIKEFESMQPLSCKKDNNDIFAKLGSXXXXXX 297
YEKVLEE+RKA QA KTE RKVD KEFESMQ LS KKDN+DIF KLGS
Sbjct: 237 EMTLEEYEKVLEERRKAFQALKTEERKVDTKEFESMQALSSKKDNHDIFIKLGSDKDKRK 296
Query: 298 XXXXXXXXXXXSVSINEFLKPAEGETYYPXXXXXXXXXXXXXXXXXXXXXNATSNAPAPS 357
SVSI EFLKPAEGE YY +AT+NAPAPS
Sbjct: 297 EAFEKEEKSKKSVSITEFLKPAEGEAYY--NPGRGRGRGRGSRGGGGYHGSATNNAPAPS 354
Query: 358 IEDPGHFPTLGGK 370
IEDPGHFPTL K
Sbjct: 355 IEDPGHFPTLSAK 367
>Glyma18g48620.1
Length = 370
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 192/376 (51%), Positives = 208/376 (55%), Gaps = 12/376 (3%)
Query: 1 MATMNPFDLLGDDAEDPSQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPSKPL 60
MAT NPFDLLGDDAEDPSQLI +P+KP
Sbjct: 1 MATTNPFDLLGDDAEDPSQLI---AAEQLKAAAAASAATAAPKKAPAQQNKPAQLPTKPP 57
Query: 61 PPAQAVRDARNEPSXXXXXXXXXXXXXXXXXXXXNRDFSNDENSFPASGAPDNLGPF-EG 119
PPAQAVRDARNEP +RD SNDENSFP S AP N GPF EG
Sbjct: 58 PPAQAVRDARNEPVRGGRGGGRGGGRGFGRGRGFSRDSSNDENSFPTSRAPYNQGPFEEG 117
Query: 120 DSEKASEXXXXXXXXXXXXXXXXXXXXXFSNGEA--DEEGRPRRAFERHSGTGRGSGFKR 177
D+ K+SE FSNGE E+GRPRRAF+R SGTGRG+ FKR
Sbjct: 118 DAGKSSE---RRSYGGPRVPYRGGRRGGFSNGETGEGEDGRPRRAFDRRSGTGRGNEFKR 174
Query: 178 EGAGRGNWGTQSDEIAQVTDEVANETEKNLSDEKPAV-EDVADGXXXXXXXXXXXXXXXX 236
EG+GRGNWGTQ+DE+AQVTDEV NETEKNL DEKPAV EDVADG
Sbjct: 175 EGSGRGNWGTQTDELAQVTDEVVNETEKNLGDEKPAVEEDVADGNKDSPTNETEEKEPED 234
Query: 237 XXXXXXXYEKVLEEKRKALQAQKTEGRKVDIKEFESMQPLSCKKDNNDIFAKLGSXXXXX 296
YEKVLEE+RKA QA KTE RKVD KEFESMQ LS KKDN+DIF KLGS
Sbjct: 235 KEMTLEEYEKVLEERRKAFQALKTEERKVDTKEFESMQALSSKKDNHDIFIKLGSDKDKR 294
Query: 297 XXXXXXXXXXXXSVSINEFLKPAEGETYY--PXXXXXXXXXXXXXXXXXXXXXNATSNAP 354
SVSI EFLKPAEGE YY ++T+NAP
Sbjct: 295 KEAFEKEEKSKKSVSITEFLKPAEGEAYYNPGRGRGRGRGSRGGGGGGGVYRGSSTNNAP 354
Query: 355 APSIEDPGHFPTLGGK 370
APSIEDPGHFP LG K
Sbjct: 355 APSIEDPGHFPNLGAK 370
>Glyma03g26100.1
Length = 368
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 186/377 (49%), Positives = 205/377 (54%), Gaps = 16/377 (4%)
Query: 1 MATMNPFDLLGDDAEDPSQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPSKPL 60
MAT NPFDLLGDDAEDPSQLI +PSKPL
Sbjct: 1 MATTNPFDLLGDDAEDPSQLIAAEQLKAAAAAATAPPKKDQAKPGARSGAPAQ-LPSKPL 59
Query: 61 PPAQAVRDARNEPS----XXXXXXXXXXXXXXXXXXXXNRDFSNDENSFPASGAPDNLGP 116
PP+QAVR+A+NE S RDFSND+NS AP N G
Sbjct: 60 PPSQAVREAKNETSYGGRGGGRGGGRGFGRGRGGGGGFGRDFSNDDNS----SAPANQGS 115
Query: 117 FEGDSEKASEXXXXXXXXXXXXXXXXXXXXX--FSNGEADEEGRPRRAFERHSGTGRGSG 174
FEGDS SE FSNGE +EGRPRRAFERHSGTGRG+
Sbjct: 116 FEGDSGNPSERRGYGGPRGPYRGGGSGRGRRGGFSNGETGDEGRPRRAFERHSGTGRGNE 175
Query: 175 FKREGAGRGNWGTQSDEIAQVTDEVANETEKNLSDEKPA-VEDVADGXXXXXXXXXXXXX 233
FKREG+GRGNWGTQ+D+IA+VT+EV NETEK L+DEKP ED A+G
Sbjct: 176 FKREGSGRGNWGTQNDDIAEVTEEVVNETEKVLADEKPVGEEDAAEGNKDSPANENEEKE 235
Query: 234 XXXXXXXXXXYEKVLEEKRKALQAQKTEGRKVDIKEFESMQPLSCKKDNNDIFAKLGSXX 293
YEKVLEEKRKALQAQKTE RKVDIKEF SMQPLS KK+N++IF KLGS
Sbjct: 236 PEDKEMTLEEYEKVLEEKRKALQAQKTEARKVDIKEFASMQPLSNKKENDEIFIKLGSDK 295
Query: 294 XXXXXXXXXXXXXXXSVSINEFLKPAEGETYYPXXXXXXXXXXXXXXXXXXXXXNATSNA 353
SV+I EFLKPAEGE YY NA SNA
Sbjct: 296 DKRKDALEKEEKSKKSVNITEFLKPAEGERYY----PGGRGRGRGRGSRGGYSGNAYSNA 351
Query: 354 PAPSIEDPGHFPTLGGK 370
PAPSIEDPGHFP+LGGK
Sbjct: 352 PAPSIEDPGHFPSLGGK 368
>Glyma07g13900.1
Length = 368
Score = 271 bits (694), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 179/377 (47%), Positives = 197/377 (52%), Gaps = 16/377 (4%)
Query: 1 MATMNPFDLLGDDAEDPSQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPSKPL 60
MAT NPFDLLGDDAEDPSQLI +PSKPL
Sbjct: 1 MATANPFDLLGDDAEDPSQLIAAEQLKAAAAAATAPPKKDQAKPGARGGAPAQ-LPSKPL 59
Query: 61 PPAQAVRDARNEPS----XXXXXXXXXXXXXXXXXXXXNRDFSNDENSFPASGAPDNLGP 116
PP+QAVR+A+NE S RDFSND+NS AP N G
Sbjct: 60 PPSQAVREAKNETSYGSRGGGRGGGRGFGRGRGGGGGFGRDFSNDDNS----SAPANQGS 115
Query: 117 FEGDSEKASEXXXXXXXXXXXXXXXXXXXXX--FSNGEADEEGRPRRAFERHSGTGRGSG 174
FEGDS SE F+NGE EEGRPRRAFE HSGTGRG+
Sbjct: 116 FEGDSGNHSERRGYGGPRGPYRGGGGGRGRRGGFTNGEVGEEGRPRRAFEHHSGTGRGNE 175
Query: 175 FKREGAGRGNWGTQSDEIAQVTDEVANETEKNLSDEKPA-VEDVADGXXXXXXXXXXXXX 233
FKR+G+GRGNWGTQ+D+IA VT+EV ETEKN +DEKPA ED +G
Sbjct: 176 FKRDGSGRGNWGTQNDDIAVVTEEVVYETEKNFADEKPAGEEDAPEGNKDCPANENEEKE 235
Query: 234 XXXXXXXXXXYEKVLEEKRKALQAQKTEGRKVDIKEFESMQPLSCKKDNNDIFAKLGSXX 293
YEKVLEEKRKALQAQKTE RKVDIKEF SMQPLS KK+N++IF KLGS
Sbjct: 236 PEDKEMTLEEYEKVLEEKRKALQAQKTEVRKVDIKEFASMQPLSNKKENDEIFIKLGSDK 295
Query: 294 XXXXXXXXXXXXXXXSVSINEFLKPAEGETYYPXXXXXXXXXXXXXXXXXXXXXNATSNA 353
SV+I EFLKPAEGE NA SN
Sbjct: 296 DKRKDALEKEEKSKKSVNITEFLKPAEGER----YYSGGRGRGRGRGSRGGYSGNAYSNV 351
Query: 354 PAPSIEDPGHFPTLGGK 370
PAPSIEDPG FPTL GK
Sbjct: 352 PAPSIEDPGQFPTLSGK 368
>Glyma20g39080.1
Length = 332
Score = 234 bits (598), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 167/372 (44%), Positives = 183/372 (49%), Gaps = 42/372 (11%)
Query: 1 MATMNPFDLLGDDAEDPSQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPSKPL 60
MA+MNPFDLLGDDAEDPSQ I +P+KPL
Sbjct: 1 MASMNPFDLLGDDAEDPSQQIVAEQLKAQ-------------------------LPTKPL 35
Query: 61 PPAQAVRDARNEPSXXXXXXXXXXXXXXXXXXXXNRDFSNDENSFPASGAPDNLGPFEGD 120
PP+QAVR+ARN NRD NDENSF AP FEG+
Sbjct: 36 PPSQAVREARN-----VNSRGGRGSGRGRGRGGFNRDLFNDENSF---AAPAGQVAFEGE 87
Query: 121 SEKASEXXXXXXXXXXXXXXXXXXXXXFSNGEADEEGRPRRAFERHSGTGRGSGFKREGA 180
F NGEA E+G PRR FER +GTGRG+ FKREGA
Sbjct: 88 R-----PAYGGPPGPYRGSRGGGGRGAFGNGEAAEDGLPRRPFERRNGTGRGNEFKREGA 142
Query: 181 GRGNWGTQSDEIAQVTDEVANETEKNLSDEKPAVED--VADGXXXXXXXXXXXXXXXXXX 238
GRGNWG Q+DE AQ TDEV NET KN DEKP+ ED A G
Sbjct: 143 GRGNWGVQTDEFAQATDEV-NETSKNFGDEKPSGEDDVAAIGNKENPANEAEEKEPEDKE 201
Query: 239 XXXXXYEKVLEEKRKALQAQKTEGRKVDIKEFESMQPLSCKKDNNDIFAKLGSXXXXXXX 298
YEKVLEE+RKALQA KTE RKVD K FESMQ LS KKD +DIF KLGS
Sbjct: 202 MTLEEYEKVLEERRKALQALKTEERKVDTKVFESMQQLSNKKDIDDIFIKLGSDKDKRRE 261
Query: 299 XXXXXXXXXXSVSINEFLKPAEGETYYPXXXXXXXXXXXXXXXXXXXXXNATSNAPAPSI 358
SV+INEFLK EGE+YY AT+N PAPSI
Sbjct: 262 TLEKEDKSKKSVNINEFLKSPEGESYY-NPGGHGRRHGRGRGARGGYGGYATANIPAPSI 320
Query: 359 EDPGHFPTLGGK 370
EDPG FPTLG K
Sbjct: 321 EDPGQFPTLGVK 332
>Glyma18g49190.1
Length = 159
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/143 (64%), Positives = 105/143 (73%), Gaps = 1/143 (0%)
Query: 148 FSNGEADEEGRPRRAFERHSGTGRGSGFKREGAGRGNWGTQSDEIAQVTDEVANETEKNL 207
FSNGEA +EG PRRAF+RHSGTGRG+ FKREG GRGNWGTQ+++IA+V +EV NETEK L
Sbjct: 17 FSNGEAGDEGCPRRAFKRHSGTGRGNEFKREGFGRGNWGTQNEDIAEVIEEVVNETEKIL 76
Query: 208 SDEKPA-VEDVADGXXXXXXXXXXXXXXXXXXXXXXXYEKVLEEKRKALQAQKTEGRKVD 266
+DEKP ED A+G YEKVLEEKRKALQAQKTE RKVD
Sbjct: 77 ADEKPVGEEDAAEGNKDSPANENEEKEPEDKEMTLEEYEKVLEEKRKALQAQKTEARKVD 136
Query: 267 IKEFESMQPLSCKKDNNDIFAKL 289
IKEF SMQPLS KK+N++IF KL
Sbjct: 137 IKEFASMQPLSNKKENDEIFIKL 159
>Glyma02g12800.1
Length = 232
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/129 (56%), Positives = 88/129 (68%), Gaps = 4/129 (3%)
Query: 95 NRDFSNDENSFPASGAPDNLGPFEGDSEKASEXXXXXXXXXXXXXXXXXXXXXFSNGEAD 154
+RD SNDENSFP SG P N F+GD+ K+ E FSNGE
Sbjct: 12 SRDSSNDENSFPTSGDPYNQVSFKGDAGKSFERRGYGGPRGPYRGGGGHRGG-FSNGEIG 70
Query: 155 E--EGRPRRAFERHSGTGRGSGFKREGAGRGNWGTQSDEIAQVTDEVANETEKNLSDEKP 212
E EG+P+RAF+R +G GRG+ FKREG+GRGNWGTQ+DE+AQVTD+VANETEKNL DEKP
Sbjct: 71 EAEEGQPQRAFDRCNGIGRGNEFKREGSGRGNWGTQTDELAQVTDKVANETEKNLGDEKP 130
Query: 213 AV-EDVADG 220
+ ED+ DG
Sbjct: 131 TIEEDIVDG 139
>Glyma09g24870.1
Length = 153
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 81/128 (63%), Gaps = 11/128 (8%)
Query: 148 FSNGEADEEGRPRRAFERHSGTGRGSGFKREGAGRGNWGTQSDEIAQVTDEVANETEKNL 207
FSNGEA +EGRPRRAF+ HSGTGRG+ FKREG GRGNWGTQ+D+IA+V +EV NETEK L
Sbjct: 24 FSNGEAGDEGRPRRAFKLHSGTGRGNEFKREGFGRGNWGTQNDDIAEVIEEVVNETEKIL 83
Query: 208 SDEKP-AVEDVADGXXXXXXXXXXXXXXXXXXXXXXXYEKVLEEKRKALQAQKTEGRKVD 266
+DEK ED A+G YEK AQKTE RK+D
Sbjct: 84 ADEKRIGEEDAAEGNKDSPANENEEKESEDKEMTLEEYEK----------AQKTEARKLD 133
Query: 267 IKEFESMQ 274
IKEF SM+
Sbjct: 134 IKEFASMK 141
>Glyma03g10930.1
Length = 246
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 81/128 (63%), Gaps = 16/128 (12%)
Query: 95 NRDFSNDENSFPASGAPDNLGPFEGDSEKASEXXXXXXXXXXXXXXXXXXXXXFSNGEAD 154
+RD SNDENSFP +GAP N FEG++ K+SE FSNGE
Sbjct: 60 SRDSSNDENSFPTNGAPYNQVSFEGNAGKSSERRDYGGPRGPYRGGGGRHGG-FSNGETG 118
Query: 155 E--EGRPRRAFERHSGTGRGSGFKREGAGRGNWGTQSDEIAQVTDEVANETEKNLSDEKP 212
E +GRPRRAF+RHS +GRGNWGTQ+DE+AQVTDEVANETEKNL DEKP
Sbjct: 119 EAEKGRPRRAFDRHS------------SGRGNWGTQTDELAQVTDEVANETEKNLGDEKP 166
Query: 213 AV-EDVAD 219
V EDVAD
Sbjct: 167 TVEEDVAD 174
>Glyma06g41840.1
Length = 139
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 38/47 (80%)
Query: 244 YEKVLEEKRKALQAQKTEGRKVDIKEFESMQPLSCKKDNNDIFAKLG 290
YEKVLEE+RKA A KTE RKVD K FES+Q LS KKDN+DIF KLG
Sbjct: 37 YEKVLEERRKAFHALKTEERKVDTKVFESLQHLSNKKDNDDIFIKLG 83
>Glyma04g27090.1
Length = 131
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 38/46 (82%)
Query: 244 YEKVLEEKRKALQAQKTEGRKVDIKEFESMQPLSCKKDNNDIFAKL 289
YEKVLEE++KA QA KT+ RKVD KEFESMQ LS KK N+DIF KL
Sbjct: 84 YEKVLEERKKAFQALKTKERKVDTKEFESMQALSSKKVNHDIFIKL 129
>Glyma03g11720.1
Length = 151
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 200 ANETEKNLSDEK--PAVED--VADGXXXXXXXXXXXXXXXXXXXXXXXYEKVLEEKRKAL 255
NET KN DEK P+ ED A+G YEKVLEE+RKA
Sbjct: 39 VNETAKNFGDEKKNPSDEDDVAANGNKENPTNEAEQKEPENKEMTLKEYEKVLEERRKAF 98
Query: 256 QAQKTEGRKVDIKEFESMQPLSCKKDNNDIFAKL 289
KTE +KVD K FES+Q LS KKDN+DIF KL
Sbjct: 99 HTLKTEEKKVDTKVFESLQHLSNKKDNDDIFIKL 132
>Glyma06g31610.1
Length = 70
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 37/47 (78%)
Query: 244 YEKVLEEKRKALQAQKTEGRKVDIKEFESMQPLSCKKDNNDIFAKLG 290
YEKVLEE+RKA A KT+ RKVD K FES+Q LS KKDN+D F KLG
Sbjct: 6 YEKVLEERRKAFHALKTKERKVDTKFFESLQHLSNKKDNDDNFIKLG 52
>Glyma03g08150.1
Length = 91
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 96 RDFSNDENSFPASGAPDNLGPFEGDSEKASEXXXXXXXXXXXXXXXXXXXXXFSNGEADE 155
RD SNDENSFP SGAP N FEG++ K+SE FSNGE E
Sbjct: 9 RDSSNDENSFPTSGAPYNQVSFEGNAWKSSE-RRGYGGPRGPYRGGGGRHGGFSNGETGE 67
Query: 156 --EGRPRRAFERH 166
EGRPRRAF+R
Sbjct: 68 AKEGRPRRAFDRR 80