Miyakogusa Predicted Gene

Lj1g3v2908510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2908510.1 tr|A9U0Y0|A9U0Y0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_173084,33.83,0.00000000000004,Small MutS-related
domain,Smr protein/MutS2 C-terminal; Smr,Smr protein/MutS2 C-terminal;
DUF1771,Do,CUFF.29661.1
         (433 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g37990.1                                                       546   e-155
Glyma09g37990.2                                                       509   e-144
Glyma18g48400.1                                                       258   8e-69

>Glyma09g37990.1 
          Length = 419

 Score =  546 bits (1407), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 279/425 (65%), Positives = 327/425 (76%), Gaps = 18/425 (4%)

Query: 1   MTILAGSSTKKMSSARGQSSGWAAFDLKQRKKNNLESDADKDPFPALGTSSSMQHVDNKL 60
           MT  A SS KKMS ARGQSSGW AFDLKQRK NN ES+ DKDPFPA+GT+  M       
Sbjct: 1   MTASARSSLKKMSWARGQSSGWTAFDLKQRKNNNFESEDDKDPFPAIGTTDPM------- 53

Query: 61  AKKNRVPSKPFSSVILPAKNFPPLKEGGNGKKTMLVFDSTEKCHGNTVQGDVNLAIKRLK 120
             KN VP+KPFSSV+LP +NFPP KEGGN KK M+  DS  K  G T Q DVNLAIK+L+
Sbjct: 54  VGKNHVPAKPFSSVLLPTRNFPPFKEGGNSKKAMVGSDSDGKYCGATAQEDVNLAIKKLR 113

Query: 121 EQHLWAENSLIEDILAAVDNNVNKASALLETMASAVNFEDNNVSSDPRATTSDDI----- 175
           EQHLWAE+SLI+DI +AV+NN++KA+ALLETM  A NFE++ VSS+PR+TTSDD      
Sbjct: 114 EQHLWAEHSLIDDIFSAVNNNIDKATALLETMDPAANFEESKVSSNPRSTTSDDTPCKDK 173

Query: 176 TDESLTLENVKDDIPFRSNLVSHLQDNDEDSEVRNASSDQKFSGVDNLRFKMNILYSVPV 235
           TD+SLT E V+DDIPF SNLV +LQDND+D E RNA S QK S VD LR KM +L S+PV
Sbjct: 174 TDDSLTSEKVEDDIPFDSNLVDNLQDNDKDLEDRNAPSGQKLSDVDYLRCKMKLLNSIPV 233

Query: 236 EPEWEDDDVYNSHRKDALRTMXXXXXXXXXXXXXFLKGDHYSAQQHSMKAREEWHAADKL 295
           EPEWEDDD+Y S+RKDALRTM             FL+GDH+SAQ HSMKAR E H A++L
Sbjct: 234 EPEWEDDDIYISNRKDALRTMRSASRHSRAASSAFLRGDHFSAQHHSMKARAERHTAEEL 293

Query: 296 NTEAATKILGIRNNENDIWKLDLHGLHAAEAIQALQGHLYKIESQGFPKNTATSS-VKEN 354
           N++AA KIL +RNNENDIWKLDLHGLHA EAIQALQ HLY+IESQGF K++ATS+ VKEN
Sbjct: 294 NSDAAKKILSVRNNENDIWKLDLHGLHATEAIQALQEHLYRIESQGFSKSSATSNGVKEN 353

Query: 355 GLAHSTIRSLNVTNRENLDKQAPLRLRSSALHVITGIGNHSRGQAALPSAVRNFLIENRY 414
           GL HST+ SLN      +D++APLRLR  ALHVITG+GNHSRGQAALP+AVR+FL ENR 
Sbjct: 354 GLGHSTLGSLNF-----MDREAPLRLRPLALHVITGVGNHSRGQAALPTAVRSFLNENRS 408

Query: 415 RFEET 419
           +  + 
Sbjct: 409 KISQC 413


>Glyma09g37990.2 
          Length = 373

 Score =  509 bits (1311), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 261/422 (61%), Positives = 302/422 (71%), Gaps = 51/422 (12%)

Query: 12  MSSARGQSSGWAAFDLKQRKKNNLESDADKDPFPALGTSSSMQHVDNKLAKKNRVPSKPF 71
           MS ARGQSSGW AFDLKQRK NN ES+ DKDPFPA+GT+  M         KN VP+KPF
Sbjct: 1   MSWARGQSSGWTAFDLKQRKNNNFESEDDKDPFPAIGTTDPM-------VGKNHVPAKPF 53

Query: 72  SSVILPAKNFPPLKEGGNGKKTMLVFDSTEKCHGNTVQGDVNLAIKRLKEQHLWAENSLI 131
           SSV+LP +NFPP KEGGN KK M+  DS  K  G T Q DVNLAIK+L+EQHLWAE+SLI
Sbjct: 54  SSVLLPTRNFPPFKEGGNSKKAMVGSDSDGKYCGATAQEDVNLAIKKLREQHLWAEHSLI 113

Query: 132 EDILAAVDNNVNKASALLETMASAVNFEDNNVSSDPRATTSDDITDESLTLENVKDDIPF 191
           +DI +AV+NN++KA+ALLETM  A NFE++                              
Sbjct: 114 DDIFSAVNNNIDKATALLETMDPAANFEES------------------------------ 143

Query: 192 RSNLVSHLQDNDEDSEVRNASSDQKFSGVDNLRFKMNILYSVPVEPEWEDDDVYNSHRKD 251
                   +DND+D E RNA S QK S VD LR KM +L S+PVEPEWEDDD+Y S+RKD
Sbjct: 144 --------KDNDKDLEDRNAPSGQKLSDVDYLRCKMKLLNSIPVEPEWEDDDIYISNRKD 195

Query: 252 ALRTMXXXXXXXXXXXXXFLKGDHYSAQQHSMKAREEWHAADKLNTEAATKILGIRNNEN 311
           ALRTM             FL+GDH+SAQ HSMKAR E H A++LN++AA KIL +RNNEN
Sbjct: 196 ALRTMRSASRHSRAASSAFLRGDHFSAQHHSMKARAERHTAEELNSDAAKKILSVRNNEN 255

Query: 312 DIWKLDLHGLHAAEAIQALQGHLYKIESQGFPKNTATS-SVKENGLAHSTIRSLNVTNRE 370
           DIWKLDLHGLHA EAIQALQ HLY+IESQGF K++ATS  VKENGL HST+ SLN     
Sbjct: 256 DIWKLDLHGLHATEAIQALQEHLYRIESQGFSKSSATSNGVKENGLGHSTLGSLNF---- 311

Query: 371 NLDKQAPLRLRSSALHVITGIGNHSRGQAALPSAVRNFLIENRYRFEETRPGAITVWPKF 430
            +D++APLRLR  ALHVITG+GNHSRGQAALP+AVR+FL ENRYRFEE RPG ITVWPKF
Sbjct: 312 -MDREAPLRLRPLALHVITGVGNHSRGQAALPTAVRSFLNENRYRFEEMRPGVITVWPKF 370

Query: 431 RQ 432
           RQ
Sbjct: 371 RQ 372


>Glyma18g48400.1 
          Length = 441

 Score =  258 bits (659), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 178/457 (38%), Positives = 239/457 (52%), Gaps = 42/457 (9%)

Query: 1   MTILAGSSTKKMSSARGQSSGWAAFDLKQRKKNNLESDADKDPFPALGTSSSMQHVDNKL 60
           M   A SS KKMS A+GQSSGW AFDLKQRK  + ES+ D DPFPA+G +       + +
Sbjct: 1   MAASAHSSLKKMSWAKGQSSGWTAFDLKQRKNKDFESEVDDDPFPAIGPT-------DPI 53

Query: 61  AKKNRVPSKPFSSVILPAKNFPPLKEGGNGKKTMLVFDSTEKCHGNTVQGDVNLAIKRLK 120
            KKN VP+KPFSSV+LP KNFPPL E GN KK ML  DS  K  G T Q DVNLAIK+L+
Sbjct: 54  IKKNHVPAKPFSSVLLPTKNFPPLNEDGNSKKAMLGSDSDGKYCGATTQEDVNLAIKKLR 113

Query: 121 EQHLWAENSLIEDILAAVDNNVNKASALLETMASAVNFEDNNVSSDPRATTSDDITDESL 180
           EQHLWAE+SLI+DI  AV+NN++KA++LLETMA AVNFE++      R T    I    +
Sbjct: 114 EQHLWAEHSLIDDIFTAVNNNIDKATSLLETMAPAVNFEESK--KRLRMTFPSIIILCKM 171

Query: 181 TLENV-------KDDIPFRSNLVSHLQDNDEDSEVRNASSDQKFSGVDNLRFKMNILYSV 233
            L N        +DD  + SN    L+     S    A+S     G D+   +    +S+
Sbjct: 172 KLLNSVPVEPEWEDDDIYISNRKDALRTMRLASRHSKAASSAFLRG-DHFSAQH---HSM 227

Query: 234 PVEPEWEDDDVYNSHRKDALRTMXXXXXXXXXXXXXFLKGDHYSAQQ----HSMKAREEW 289
               EW   +  NS   DA + +              L       ++    HS      +
Sbjct: 228 KARAEWHTAEELNS---DAAKKILSIRNNENDIWRLDLHATSNGVKENGLGHSTLGSFNF 284

Query: 290 HAADKLNTEAATKILGIRNNENDIWK----------LDLHGLHAAEAIQALQGHLYKIES 339
              +KL+T+A  ++      E +I +          + L  +     + +L      I  
Sbjct: 285 MDREKLDTQAPLRLRPCHFTEANILQNHTNPSVKTLIILFCMQLVWHMGSLTTFCGSIPG 344

Query: 340 QGFPKNTATSSVKENGLA----HSTIRSLNVTNRENLDKQAPLRLRSSALHVITGIGNHS 395
            G   +   +++ +NG      +       +     + + +PL    + + + TGIGNHS
Sbjct: 345 LGMKLHLGVTTLSQNGPIRWKDNYCFFGKIIEKEYYIQRTSPLH-SPNYIFISTGIGNHS 403

Query: 396 RGQAALPSAVRNFLIENRYRFEETRPGAITVWPKFRQ 432
           RG AALP+AVR+FL ENRYRFEE RPG ITVWPKFRQ
Sbjct: 404 RGLAALPAAVRSFLNENRYRFEEMRPGVITVWPKFRQ 440