Miyakogusa Predicted Gene

Lj1g3v2862750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2862750.1 tr|Q9FG25|Q9FG25_ARATH Mitochondrial
transcription termination factor family protein OS=Arabidopsis
,23.23,3e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
mTERF,Mitochodrial transcription termination factor,CUFF.29614.1
         (471 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g14330.1                                                       407   e-113
Glyma03g26720.1                                                       283   2e-76
Glyma14g05540.1                                                       139   7e-33
Glyma19g32820.1                                                        91   3e-18

>Glyma07g14330.1 
          Length = 560

 Score =  407 bits (1047), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/472 (47%), Positives = 303/472 (64%), Gaps = 16/472 (3%)

Query: 10  SLYRHFSIST------ILRKIPIRHRNLAVHEAQKALTDYLHATRSFPFTYAELIGNNTL 63
           SL+RH   +T          IP +++  A+ + QK+LTDYLHATR  P+ YA+ I  N+L
Sbjct: 2   SLHRHVCTTTSKLSAAAAAAIPWKYKKFAIAQGQKSLTDYLHATRCIPYAYADKIAKNSL 61

Query: 64  CSLSNLIAKV---EFSPSTFSKSFQRVLRYHPINEFEVFFESIGIEHHLVSGLLPDDKVF 120
            SL+ LI       FSP  F  +  + LRYHPINEFE FFESIGI    +  LLP D  F
Sbjct: 62  TSLTTLITTTLGGSFSPPHFPHNLNKFLRYHPINEFEFFFESIGIHPSKLGSLLPQDNFF 121

Query: 121 FSQDRSLFDAACALSDFGFPWEKLGVLYLQESSIFGRSAAELKSRLGELKGFGFGNVEVI 180
           FS+D +L +AA  L +FGFPW++LG+LY++    F   A+ELK RL   K +GF N +V+
Sbjct: 122 FSEDDTLLNAARVLHEFGFPWDRLGILYVESGCFFKCGASELKGRLCGFKRYGFCNAQVV 181

Query: 181 GMCLAFPFVLSEESQEGVGIDELFSDLKLIFLDFGLGRFVEG----DVDSWHEVCRKLRL 236
           G+CLAFPFV   + Q+G  ++ LF DL L+F + GL   VEG     VD W  VCRK+RL
Sbjct: 182 GICLAFPFVF--DGQKGDEVEALFCDLGLLFGELGLAECVEGKGNNSVDDWIGVCRKIRL 239

Query: 237 FIDLIGYKGNL-WEYIGRNKYKSIFIEYREEELVNKVKFFCRFGVKKEEVAQXXXXXXXX 295
           F DL G +  +            + +E+ EEELV   ++FC FG KKE+VA+        
Sbjct: 240 FYDLNGGRSLVELVGGNNGVGVGVILEHGEEELVQATEYFCSFGAKKEDVARLIVDGREL 299

Query: 296 XXXXXENPVINVLKLLKHFGLSSKDLDEISQKFAHVLGRNKLVNLPNVMRALGLQEWFFD 355
                +  V++V+KLLK+FG+SS D++++ + +AHVLG  K+ NLPNVMRALGL EWFF 
Sbjct: 300 LELDLKTRVVDVVKLLKYFGMSSDDVEDVRRDYAHVLGTVKMGNLPNVMRALGLHEWFFG 359

Query: 356 KINGGHHQLLTDYIAKYPNEDQDKDYQDGLRRIQISRARVHSISKLKFLHGLGFGENALT 415
           KI  G+H LL  ++A YPNE QD+ Y   L+ IQ SR   H+ISKL FLH +GFGENALT
Sbjct: 360 KIKDGNHCLLVSFVASYPNEVQDEGYLGCLKAIQESRTPTHNISKLNFLHAIGFGENALT 419

Query: 416 IDVLNHLHGTSSELQERFDCLLCSRIEFSKLCMMVRRTPRILNQNSETIKRK 467
           ++V   +HGTS ELQ+RFDCLL   IEFSK+C M+   P+IL+QN + +++K
Sbjct: 420 MNVYAQMHGTSVELQKRFDCLLRLGIEFSKVCKMITIYPKILSQNPQNLEQK 471


>Glyma03g26720.1 
          Length = 469

 Score =  283 bits (725), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 177/452 (39%), Positives = 251/452 (55%), Gaps = 83/452 (18%)

Query: 24  IPIRHRNLAVHEAQKALTDYLHATRSFPFTYAELIGNNTLCSLSNLIAKV---EFSPSTF 80
           IP +++  A+ + QK+LTDYLHATRS P+ YA  I  N+L SL+ LI  +    FSP  F
Sbjct: 3   IPWKYKKFAISQGQKSLTDYLHATRSIPYAYANQIAKNSLTSLTTLITTLGTSSFSPLHF 62

Query: 81  SKSFQRVLRYHPINEFEVFFESIGIEHHLVSGLLPDDKVFFSQDRSLFDAACALSDFGFP 140
             +  + L YHPINEFE FFESIGI       LLP DK FFSQD +L  AAC L +FGFP
Sbjct: 63  PHNLNKFLMYHPINEFEFFFESIGIHPSNFHSLLPQDKFFFSQDDTLLSAACVLYEFGFP 122

Query: 141 WEKLGVLYLQESSIFGRSAAELKSRLGELKGFGFGNVEVIGMCLAFPFVLSEESQEGVG- 199
           W++LGVLY++        A+ELK R+   K +G  N +V+G+C+AFPFV   + Q+G   
Sbjct: 123 WDRLGVLYVESGCFLNWGASELKDRVCGFKRYGLCNEQVVGVCMAFPFVF--DGQKGDDE 180

Query: 200 IDELFSDLKLIFLDFGLGRFVEG----DVDSWHEVCRKLRLFIDLIGYKGNLWEYIGRNK 255
           ++ LF DL L+F +FGL   VEG     VD W      +R  ++LIG             
Sbjct: 181 VEALFRDLGLLFGEFGLAECVEGKGNYSVDDW------IRSLVELIGRN--------NGG 226

Query: 256 YKSIFIEYREEELVNKVKFFCRFGVKKEEVAQXXXXXXXXXXXXXENPVINVLKLLKHFG 315
              + +E+ EEELV   ++F  +G +  E+               E  V++V+KLLK+FG
Sbjct: 227 GVGVIVEHGEEELVQAAEYF--YGPELLEL-------------DLEAWVVDVVKLLKYFG 271

Query: 316 LSSKDLDEISQKFAHVLGRNKLVNLPNVMRALGLQEWFFDKINGGHHQLLTDYIAKYPNE 375
           + S D++++ + +AHVLG  K+                                      
Sbjct: 272 MRSDDVEDVRRDYAHVLGTVKM-------------------------------------- 293

Query: 376 DQDKDYQDGLRRIQISRARVHSISKLKFLHGLGFGENALTIDVLNHLHGTSSELQERFDC 435
             D+ ++  +     SR   H+ISKL FLH +GFGENALT++V   +HGTS +LQ+RF+C
Sbjct: 294 --DQGWESSIA----SRTPTHNISKLNFLHAIGFGENALTMNVYAQMHGTSGKLQKRFNC 347

Query: 436 LLCSRIEFSKLCMMVRRTPRILNQNSETIKRK 467
           LL   IEFSK+C M+   P+IL+QN + +++K
Sbjct: 348 LLRLGIEFSKICKMITIHPKILSQNPQNLEQK 379


>Glyma14g05540.1 
          Length = 512

 Score =  139 bits (350), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 203/452 (44%), Gaps = 15/452 (3%)

Query: 18  STILRKIPIRHRNLAVHEAQKALTDYLHATRSFPFTYAELIGNNTLCSLSNLIAKVEFSP 77
           S +  + P R   L   EAQ AL DY+H+TR + F+ AE I  N+   + +L++ ++   
Sbjct: 1   SVLSSRSPKRVSRLLRSEAQHALMDYMHSTRGYTFSDAEYISENSPRFIESLVSMIDDKD 60

Query: 78  STFSKSFQRVLRYHPINEFEVFFESIGIEHHLVSGLLPDDKVFFSQDRSLFDAACALSDF 137
               +S +R LRY+PINEFE FFES+GI+   +   LP    F + D  L     AL ++
Sbjct: 61  DVL-RSLERFLRYNPINEFEPFFESLGIDPSELYLFLPHGMFFLADDHVLLQNFHALCNY 119

Query: 138 GFPWEKLGVLYLQESSIFGRSAAELKSRLGELKGFGFGNVEVIGMCLAFPFVLSEESQ-E 196
           G P  ++G  + +   IFG ++  L S+L   +  G     V+ + +  P +L  +   E
Sbjct: 120 GVPRNRMGKFFKEAKEIFGYASGVLLSKLEAYENLGLRKSTVVKLVVCCPLLLVGDVNFE 179

Query: 197 GVGIDELFSDLKLIFLDFGLGRFVEGDVDSWHEVCRKLRLFIDLIGYKGNLWEYIGRNKY 256
            V + +    +  I  D+ +         SW  +   + LF+  +GY       + R   
Sbjct: 180 FVSVLDWLKRIG-IESDWMVNYLSCSRTYSWKRMLDAM-LFLHKVGYSEEQMHNLFRENP 237

Query: 257 KSIFIEYREEELVNKVKFFCRFGVKKEEVAQXXXXXXXXXXXXXENPVINVLKLLKHFGL 316
           K + +E    ++        + GV+   V                N ++ V+  L   G+
Sbjct: 238 K-LLLEGFGRKVYLVFGRLLKVGVEMNVVYSYFVEYPNILLNKCANDMLRVIDFLGAIGM 296

Query: 317 SSKDLDEISQKFAHVLGRNKLVNLPNVMRALGLQEWFFDKINGGHHQLLTDYIAKYPNED 376
              D+  I  K+ H+L    L     V + L + +          +Q++ D   K  +  
Sbjct: 297 GKDDITHILSKYMHLLITRSLKGHKTVCQELKVGK-------ADLYQIIKDDPLKLISL- 348

Query: 377 QDKDYQDGLRRIQISRARVHSISKLKFLHGLGFGENALTI-DVLNHLHGTSSELQERFDC 435
             K  Q G  ++     R + + K  FL  LG+ EN+  +   L    G   +LQERFDC
Sbjct: 349 ASKQEQKGNGKVDSHDPR-NYLEKTTFLLKLGYIENSEEMAKALKMFRGRGDQLQERFDC 407

Query: 436 LLCSRIEFSKLCMMVRRTPRILNQNSETIKRK 467
           L+ + ++++ +  M++R P IL+QN   I++K
Sbjct: 408 LVEAGLDYNSVIEMIKRAPMILSQNKAVIQKK 439


>Glyma19g32820.1 
          Length = 510

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 179/419 (42%), Gaps = 73/419 (17%)

Query: 82  KSFQRVLRYHPINEFEVFFESIGIEHHLVSGLLPDDKVFFSQDRSLFDAACALSDFGFPW 141
           +S  R LRYHPINEFE FFES G+     +  LP D ++ + D  L +   AL ++G P 
Sbjct: 45  RSISRYLRYHPINEFEPFFESAGLTPPEYAPFLPRDMIYLNDDALLMENYHALCNYGVPR 104

Query: 142 EKLGVLYLQESSIFGRSAAELKSRLGELKGFGFGNVEVIGMCLAFP----------FVLS 191
            K+G L+     +F      L S+L + +  G     +  +  + P          FV  
Sbjct: 105 TKMGRLFKLTPQLFRYKPGVLISKLRDYEKLGVARRTLACVVASSPCILVGGVDVGFVKV 164

Query: 192 EESQEGV---GIDELFSDLKLIFLDFGLGRFVEGDVDSWHEVCRKLRLFIDLIGYKGNLW 248
            E  +GV    +D +  +L  +  D       +G  D W  V   L L +D +  +  L 
Sbjct: 165 VEKLKGVVGKDVDWIGENLLDMLSD-------QGCCD-WRIVLHVLCL-LDRVYSEEQLG 215

Query: 249 EYIGRNKYKSIFIEYREEELVNKVKFFCRFGVKKEEVAQXXXXXXXXXXXXXENPVINVL 308
           ++  R  + S+  E     +++ + F  +FG+  ++V+              E P I V 
Sbjct: 216 DFFIR--HPSVVFEDSGGSVLSLINFLFKFGLSLDQVS----------LMLLEFPKIRVT 263

Query: 309 KLLKHF----------GLSSKDLDEISQKFAHVLGRNKLVNLPNVMRALGLQEWFFDKIN 358
           K L +            + + ++ EI Q    VLG   L     ++  L          N
Sbjct: 264 KFLSNLRQCFLFLTEIEMEALEIGEILQSQCLVLGSFTLKKTITLLTNL----------N 313

Query: 359 GGHHQLLTDYIAKYPNEDQ--DKDYQDGLRRIQISRARVHSI-------SKLKFLHGLGF 409
            G  +L      +   +D    K +  G RRIQ     V+S         K KF+  LG+
Sbjct: 314 AGKKRL-----CRVVRDDPLVMKSWALG-RRIQ---PFVNSYLEYESKEQKKKFMLKLGY 364

Query: 410 GENALTI-DVLNHLHGTSSELQERFDCLLCSRIEFSKLCMMVRRTPRILNQNSETIKRK 467
            EN+  + + +    G  +EL+ER D ++ + +++  +C M+R +PRILNQ ++ I  K
Sbjct: 365 VENSKKMNETIRLFRGKGAELEERLDFIVKAGLDYEVVCKMIRDSPRILNQTTDRINMK 423