Miyakogusa Predicted Gene

Lj1g3v2862520.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2862520.2 tr|F4J9G6|F4J9G6_ARATH LETM1-like protein
OS=Arabidopsis thaliana GN=At3g59820 PE=4
SV=1,70.31,7e-18,EF-hand,NULL; EF_HAND_2,EF-HAND 2; no
description,EF-hand-like domain,CUFF.29621.2
         (90 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g38300.1                                                       157   2e-39
Glyma08g13240.1                                                       148   2e-36
Glyma05g30090.2                                                       147   2e-36
Glyma10g09940.1                                                        73   6e-14
Glyma08g13240.2                                                        50   4e-07

>Glyma09g38300.1 
          Length = 755

 Score =  157 bits (398), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/90 (87%), Positives = 82/90 (91%)

Query: 1   MLHTLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVQSAAMYLKDTLGKEGIQELISNLS 60
           ML TLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEV SAAMYLKDTLGKEGI E ISNLS
Sbjct: 666 MLQTLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVVSAAMYLKDTLGKEGIHEFISNLS 725

Query: 61  KDSDGKILVEDIVRLGIQKEDADAEEVRRS 90
           KDSDGKILVEDI +LG QKE+AD +EV RS
Sbjct: 726 KDSDGKILVEDIAKLGAQKEEADRDEVGRS 755


>Glyma08g13240.1 
          Length = 738

 Score =  148 bits (373), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/86 (84%), Positives = 78/86 (90%)

Query: 1   MLHTLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVQSAAMYLKDTLGKEGIQELISNLS 60
           ML  LEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEV SAAMYLKDTLGKEGIQEL+S+LS
Sbjct: 645 MLQNLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVASAAMYLKDTLGKEGIQELVSSLS 704

Query: 61  KDSDGKILVEDIVRLGIQKEDADAEE 86
           KD DGKILVEDIV+LG  +ED +A E
Sbjct: 705 KDRDGKILVEDIVKLGSWREDGNAHE 730


>Glyma05g30090.2 
          Length = 363

 Score =  147 bits (371), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/86 (86%), Positives = 78/86 (90%)

Query: 1   MLHTLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVQSAAMYLKDTLGKEGIQELISNLS 60
           ML  LEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEV SAAMYLKDTLGKEGIQELIS+LS
Sbjct: 271 MLQNLEKEIDDVDAKIGDRWRLLDRDYDGKVTPEEVASAAMYLKDTLGKEGIQELISSLS 330

Query: 61  KDSDGKILVEDIVRLGIQKEDADAEE 86
           KD DGKILVEDIV+LG  +ED +A E
Sbjct: 331 KDRDGKILVEDIVKLGSWREDGNAPE 356


>Glyma10g09940.1 
          Length = 329

 Score = 73.2 bits (178), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/39 (89%), Positives = 36/39 (92%)

Query: 25  RDYDGKVTPEEVQSAAMYLKDTLGKEGIQELISNLSKDS 63
           +DYDGKVTPEEV S AMYLKDTLGKEGI ELISNLSKDS
Sbjct: 290 KDYDGKVTPEEVVSVAMYLKDTLGKEGIHELISNLSKDS 328


>Glyma08g13240.2 
          Length = 538

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/25 (92%), Positives = 23/25 (92%)

Query: 1   MLHTLEKEIDDVDAKIGDRWRLLDR 25
           ML  LEKEIDDVDAKIGDRWRLLDR
Sbjct: 507 MLQNLEKEIDDVDAKIGDRWRLLDR 531